Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
04:38:04 (233196): wrapper (7.7.26015): starting
04:38:04 (233196): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 04:38:04] Arguments: --nthreads 4
[2025-10-12 04:38:04] Threads: 4
[2025-10-12 04:38:04] Checking for CVMFS
[2025-10-12 04:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:38:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:38:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:38:04] 2.13.2.0 3732220 6343 59744 151613 0 188 2596451 4096000 13740 130560 0 44274639 99.999 345289 1298 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 04:38:04] CVMFS is ok
[2025-10-12 04:38:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:38:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 04:38:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 04:38:04] Further information can be found at the LHC@home message board.
[2025-10-12 04:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:38:04] Checking for apptainer binary...
[2025-10-12 04:38:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:38:04] Running /usr/bin/apptainer --version
[2025-10-12 04:38:04] apptainer version 1.4.3
[2025-10-12 04:38:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:38:05] T7810-Ubuntu
[2025-10-12 04:38:05] apptainer works
[2025-10-12 04:38:05] Set ATHENA_PROC_NUMBER=4
[2025-10-12 04:38:05] Set ATHENA_CORE_NUMBER=4
[2025-10-12 04:38:05] Starting ATLAS job with PandaID=6839162752
[2025-10-12 04:38:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:04:55]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:04:55] 2025-10-12 12:04:21,078 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 08:04:55] 2025-10-12 12:04:21,092 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2636.553850000001
[2025-10-12 08:04:55] 2025-10-12 12:04:21,104 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-6839162752/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,105 | INFO     | extracted standard info from prmon json
[2025-10-12 08:04:55] 2025-10-12 12:04:21,106 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:04:55] 2025-10-12 12:04:21,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:04:55] 2025-10-12 12:04:21,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:04:55] 2025-10-12 12:04:21,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:04:55] 2025-10-12 12:04:21,111 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:04:55] 2025-10-12 12:04:21,112 | INFO     | sum of square deviations: 2555770710.5
[2025-10-12 08:04:55] 2025-10-12 12:04:21,113 | INFO     | sum of deviations: 5721749339.500004
[2025-10-12 08:04:55] 2025-10-12 12:04:21,113 | INFO     | mean x: 1760264460.5
[2025-10-12 08:04:55] 2025-10-12 12:04:21,113 | INFO     | mean y: 2310802.49009901
[2025-10-12 08:04:55] 2025-10-12 12:04:21,113 | INFO     | -- intersect: -3938493422.5652866
[2025-10-12 08:04:55] 2025-10-12 12:04:21,114 | INFO     | intersect: -3938493422.5652866
[2025-10-12 08:04:55] 2025-10-12 12:04:21,114 | INFO     | chi2: 1.4788692562544596
[2025-10-12 08:04:55] 2025-10-12 12:04:21,114 | INFO     | sum of square deviations: 2370641658.0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,116 | INFO     | sum of deviations: 5661901050.000002
[2025-10-12 08:04:55] 2025-10-12 12:04:21,116 | INFO     | mean x: 1760264308.0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,116 | INFO     | mean y: 2310753.1370558375
[2025-10-12 08:04:55] 2025-10-12 12:04:21,116 | INFO     | -- intersect: -4201800948.05989
[2025-10-12 08:04:55] 2025-10-12 12:04:21,116 | INFO     | intersect: -4201800948.05989
[2025-10-12 08:04:55] 2025-10-12 12:04:21,117 | INFO     | chi2: 1.4794806017662276
[2025-10-12 08:04:55] 2025-10-12 12:04:21,117 | INFO     | current chi2=1.4794806017662276 (change=-0.0413387126132002 %)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,117 | INFO     | right removable region: 196
[2025-10-12 08:04:55] 2025-10-12 12:04:21,117 | INFO     | sum of square deviations: 2370641658.0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,118 | INFO     | sum of deviations: -20751873832.999996
[2025-10-12 08:04:55] 2025-10-12 12:04:21,118 | INFO     | mean x: 1760264613.0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,119 | INFO     | mean y: 2332328.3045685277
[2025-10-12 08:04:55] 2025-10-12 12:04:21,119 | INFO     | -- intersect: 15411151724.690357
[2025-10-12 08:04:55] 2025-10-12 12:04:21,119 | INFO     | intersect: 15411151724.690357
[2025-10-12 08:04:55] 2025-10-12 12:04:21,119 | INFO     | chi2: 0.05796645090309911
[2025-10-12 08:04:55] 2025-10-12 12:04:21,119 | INFO     | current chi2=0.05796645090309911 (change=96.08035323893938 %)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,120 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,121 | INFO     | sum of deviations: -17817023959.999996
[2025-10-12 08:04:55] 2025-10-12 12:04:21,121 | INFO     | mean x: 1760264765.5
[2025-10-12 08:04:55] 2025-10-12 12:04:21,121 | INFO     | mean y: 2329767.6354166665
[2025-10-12 08:04:55] 2025-10-12 12:04:21,121 | INFO     | -- intersect: 14292678628.372938
[2025-10-12 08:04:55] 2025-10-12 12:04:21,122 | INFO     | intersect: 14292678628.372938
[2025-10-12 08:04:55] 2025-10-12 12:04:21,122 | INFO     | chi2: 0.05305901042676188
[2025-10-12 08:04:55] 2025-10-12 12:04:21,122 | INFO     | current chi2=0.05305901042676188 (change=8.466001281570374 %)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,122 | INFO     | left removable region: 20
[2025-10-12 08:04:55] 2025-10-12 12:04:21,123 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,124 | INFO     | sum of deviations: -8446405625.999999
[2025-10-12 08:04:55] 2025-10-12 12:04:21,124 | INFO     | mean x: 1760264887.5
[2025-10-12 08:04:55] 2025-10-12 12:04:21,124 | INFO     | mean y: 2321506.477272727
[2025-10-12 08:04:55] 2025-10-12 12:04:21,124 | INFO     | -- intersect: 8797558638.873447
[2025-10-12 08:04:55] 2025-10-12 12:04:21,124 | INFO     | intersect: 8797558638.873447
[2025-10-12 08:04:55] 2025-10-12 12:04:21,125 | INFO     | chi2: 0.025794620232344766
[2025-10-12 08:04:55] 2025-10-12 12:04:21,125 | INFO     | -- intersect: 8797558638.873447
[2025-10-12 08:04:55] 2025-10-12 12:04:21,125 | INFO     | current memory leak: -5.00 B/s (using 176 data points, chi2=0.03)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,125 | INFO     | could have reported an average CPU frequency of 2631 MHz (10 samples)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | ..............................
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | . Timing measurements:
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | . get job = 0 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | . initial setup = 4 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | . payload setup = 7 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | . stage-in = 0 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,126 | INFO     | . payload execution = 12321 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,127 | INFO     | . stage-out = 3 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,127 | INFO     | . log creation = 0 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,127 | INFO     | ..............................
[2025-10-12 08:04:55] 2025-10-12 12:04:21,672 | INFO     | 
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | job summary report
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | --------------------------------------------------
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | PanDA job id: 6839162752
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | task id: 46676269
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | errors: (none)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | pilot state: finished 
[2025-10-12 08:04:55] 2025-10-12 12:04:21,673 | INFO     | transexitcode: 0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | exeerrorcode: 0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | exeerrordiag: 
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | exitcode: 0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | exitmsg: OK
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | cpuconsumptiontime: 48060 s
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | nevents: 400
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | neventsw: 0
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | pid: 244200
[2025-10-12 08:04:55] 2025-10-12 12:04:21,674 | INFO     | pgrp: 244200
[2025-10-12 08:04:55] 2025-10-12 12:04:21,675 | INFO     | corecount: 4
[2025-10-12 08:04:55] 2025-10-12 12:04:21,675 | INFO     | event service: False
[2025-10-12 08:04:55] 2025-10-12 12:04:21,675 | INFO     | sizes: {0: 2348027, 1: 2348897, 6: 2349159, 12: 2349187, 12332: 2378638, 12333: 2378637, 12336: 2387847, 12338: 2387903, 12344: 2388097}
[2025-10-12 08:04:55] 2025-10-12 12:04:21,675 | INFO     | --------------------------------------------------
[2025-10-12 08:04:55] 2025-10-12 12:04:21,675 | INFO     | 
[2025-10-12 08:04:55] 2025-10-12 12:04:21,675 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2025-10-12 08:04:55] 2025-10-12 12:04:21,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:04:55] 2025-10-12 12:04:21,699 | INFO     | job 6839162752 has completed (purged errors)
[2025-10-12 08:04:55] 2025-10-12 12:04:21,700 | INFO     | overall cleanup function is called
[2025-10-12 08:04:55] 2025-10-12 12:04:22,292 | INFO     | PID=237227 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:04:55] 2025-10-12 12:04:22,292 | INFO     | .. there are 16 such processes running
[2025-10-12 08:04:55] 2025-10-12 12:04:22,708 | INFO     | --- collectZombieJob: --- 10, [244200]
[2025-10-12 08:04:55] 2025-10-12 12:04:22,708 | INFO     | zombie collector waiting for pid 244200
[2025-10-12 08:04:55] 2025-10-12 12:04:22,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:04:55] 2025-10-12 12:04:22,708 | INFO     | collected zombie processes
[2025-10-12 08:04:55] 2025-10-12 12:04:22,709 | INFO     | will attempt to kill all subprocesses of pid=244200
[2025-10-12 08:04:55] 2025-10-12 12:04:23,199 | INFO     | process IDs to be killed: [244200] (in reverse order)
[2025-10-12 08:04:55] 2025-10-12 12:04:23,324 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:04:55] 2025-10-12 12:04:23,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:04:55] 2025-10-12 12:04:23,337 | INFO     | did not find any defunct processes belonging to 244200
[2025-10-12 08:04:55] 2025-10-12 12:04:23,348 | INFO     | did not find any defunct processes belonging to 244200
[2025-10-12 08:04:55] 2025-10-12 12:04:23,348 | INFO     | ready for new job
[2025-10-12 08:04:55] 2025-10-12 12:04:23,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:04:55] 2025-10-12 12:04:23,351 | INFO     | ***************************************
[2025-10-12 08:04:55] 2025-10-12 12:04:23,351 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:04:55] 2025-10-12 12:04:23,351 | INFO     | ***************************************
[2025-10-12 08:04:55] 2025-10-12 12:04:23,351 | INFO     | 
[2025-10-12 08:04:55] 2025-10-12 12:04:23,355 | INFO     | architecture information:
[2025-10-12 08:04:55] 2025-10-12 12:04:23,355 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:04:55] 2025-10-12 12:04:23,370 | INFO     | cat /etc/os-release:
[2025-10-12 08:04:55] NAME="CentOS Linux"
[2025-10-12 08:04:55] VERSION="7 (Core)"
[2025-10-12 08:04:55] ID="centos"
[2025-10-12 08:04:55] ID_LIKE="rhel fedora"
[2025-10-12 08:04:55] VERSION_ID="7"
[2025-10-12 08:04:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:04:55] ANSI_COLOR="0;31"
[2025-10-12 08:04:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:04:55] HOME_URL="https://www.centos.org/"
[2025-10-12 08:04:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:04:55] 
[2025-10-12 08:04:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:04:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:04:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:04:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:04:55] 
[2025-10-12 08:04:55] 2025-10-12 12:04:23,371 | INFO     | ***************************************
[2025-10-12 08:04:55] 2025-10-12 12:04:23,873 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2025-10-12 08:04:55] 2025-10-12 12:04:23,896 | INFO     | sufficient remaining disk space (398104461312 B)
[2025-10-12 08:04:55] 2025-10-12 12:04:23,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:04:55] 2025-10-12 12:04:23,897 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:04:55] 2025-10-12 12:04:23,897 | INFO     | update_server=False
[2025-10-12 08:04:55] 2025-10-12 12:04:23,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:04:55] 2025-10-12 12:04:23,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:04:55] 2025-10-12 12:04:24,123 | INFO     | all job control threads have been joined
[2025-10-12 08:04:55] 2025-10-12 12:04:24,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:04:55] 2025-10-12 12:04:24,552 | INFO     | aborting loop
[2025-10-12 08:04:55] 2025-10-12 12:04:24,834 | INFO     | all payload control threads have been joined
[2025-10-12 08:04:55] 2025-10-12 12:04:24,896 | INFO     | all data control threads have been joined
[2025-10-12 08:04:55] 2025-10-12 12:04:24,902 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,136 | INFO     | [job] control thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,192 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,304 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,557 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,680 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,685 | INFO     | [job] validate thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,839 | INFO     | [payload] control thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:04:55] 2025-10-12 12:04:25,902 | INFO     | [data] control thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:25,903 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:26,027 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:26,149 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:26,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:04:55] 2025-10-12 12:04:26,354 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:27,258 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:29,846 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:34,563 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:04:55] 2025-10-12 12:04:35,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:04:55] 2025-10-12 12:04:40,118 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:04:55] 2025-10-12 12:04:40,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137212130060096)>', '<ExcThread(monitor, started 137211638961920)>']
[2025-10-12 08:04:55] 2025-10-12 12:04:45,394 | INFO     | all workflow threads have been joined
[2025-10-12 08:04:55] 2025-10-12 12:04:45,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:04:55] 2025-10-12 12:04:45,394 | INFO     | traces error code: 0
[2025-10-12 08:04:55] 2025-10-12 12:04:45,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:04:55] 2025-10-12 12:04:54,851 | INFO     | PID=237227 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 08:04:55] 2025-10-12 12:04:54,852 | INFO     | .. there are 16 such processes running
[2025-10-12 08:04:55] 2025-10-12 12:04:54,852 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:04:55] 2025-10-12 12:04:54,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:04:55] 2025-10-12 12:04:54,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:04:55] 2025-10-12 12:04:54,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:04:55] 2025-10-12 12:04:54,852 | INFO     | [monitor] control thread has ended
[2025-10-12 08:04:55] 2025-10-12 12:04:54,953 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:04:55] 2025-10-12 12:04:54,955 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:04:55] 2025-10-12 12:04:54,959 [wrapper] pilotpid: 237227
[2025-10-12 08:04:55] 2025-10-12 12:04:54,963 [wrapper] Pilot exit status: 0
[2025-10-12 08:04:55] 2025-10-12 12:04:54,973 [wrapper] pandaids: 6839162752
[2025-10-12 08:04:55] 2025-10-12 12:04:55,054 [wrapper] cleanup supervisor_pilot  744041 237228
[2025-10-12 08:04:55] 2025-10-12 12:04:55,058 [wrapper] Test setup, not cleaning
[2025-10-12 08:04:55] 2025-10-12 12:04:55,062 [wrapper] apfmon messages muted
[2025-10-12 08:04:55] 2025-10-12 12:04:55,065 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:04:55] 2025-10-12 12:04:55,070 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:04:55]  *** Error codes and diagnostics ***
[2025-10-12 08:04:55]     "exeErrorCode": 0,
[2025-10-12 08:04:55]     "exeErrorDiag": "",
[2025-10-12 08:04:55]     "pilotErrorCode": 0,
[2025-10-12 08:04:55]     "pilotErrorDiag": "",
[2025-10-12 08:04:55]  *** Listing of results directory ***
[2025-10-12 08:04:55] total 417312
[2025-10-12 08:04:55] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 11 19:21 pilot3.tar.gz
[2025-10-12 08:04:55] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 11 19:42 queuedata.json
[2025-10-12 08:04:55] -rwx------ 1 whitlerd whitlerd     36292 Oct 11 19:42 runpilot2-wrapper.sh
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:04:55] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 04:38 run_atlas
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 04:38 job.xml
[2025-10-12 08:04:55] -rw-r--r-- 2 whitlerd whitlerd    569681 Oct 12 04:38 input.tar.gz
[2025-10-12 08:04:55] -rw-r--r-- 2 whitlerd whitlerd 221073018 Oct 12 04:38 EVNT.46676267._002731.pool.root.1
[2025-10-12 08:04:55] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 04:38 start_atlas.sh
[2025-10-12 08:04:55] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 04:38 shared
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd      8956 Oct 12 04:38 init_data.xml
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 04:38 boinc_setup_complete
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 04:38 boinc_lockfile
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd      2549 Oct 12 04:38 pandaJob.out
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd    975520 Oct 12 04:38 agis_schedconf.cvmfs.json
[2025-10-12 08:04:55] drwx------ 5 whitlerd whitlerd      4096 Oct 12 04:38 pilot3
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd 198144150 Oct 12 08:03 HITS.46676269._067175.pool.root.1
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 12 08:03 boinc_task_state.xml
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd        95 Oct 12 08:03 pilot_heartbeat.json
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd      1033 Oct 12 08:04 memory_monitor_summary.json
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 08:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd    364306 Oct 12 08:04 log.46676269._067175.job.log.tgz.1
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd      7787 Oct 12 08:04 heartbeat.json
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 08:04 boinc_mmap_file
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 08:04 wrapper_checkpoint.txt
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd       822 Oct 12 08:04 pilotlog.txt
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd   1739035 Oct 12 08:04 log.46676269._067175.job.log.1
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd       357 Oct 12 08:04 output.list
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 08:04 runtime_log
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd   2119680 Oct 12 08:04 result.tar.gz
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd      8879 Oct 12 08:04 runtime_log.err
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd       650 Oct 12 08:04 iQwKDmKPyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBzhNDmETskGm.diag
[2025-10-12 08:04:55] -rw-rw-r-- 1 whitlerd whitlerd     21304 Oct 12 08:04 stderr.txt
[2025-10-12 08:04:55] HITS file was successfully produced:
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd 198144150 Oct 12 08:03 shared/HITS.pool.root.1
[2025-10-12 08:04:55]  *** Contents of shared directory: ***
[2025-10-12 08:04:55] total 412052
[2025-10-12 08:04:55] -rw-r--r-- 2 whitlerd whitlerd    569681 Oct 12 04:38 input.tar.gz
[2025-10-12 08:04:55] -rw-r--r-- 2 whitlerd whitlerd 221073018 Oct 12 04:38 ATLAS.root_0
[2025-10-12 08:04:55] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 04:38 start_atlas.sh
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd 198144150 Oct 12 08:03 HITS.pool.root.1
[2025-10-12 08:04:55] -rw------- 1 whitlerd whitlerd   2119680 Oct 12 08:04 result.tar.gz
08:04:56 (233196): run_atlas exited; CPU time 48687.016176
08:04:56 (233196): called boinc_finish(0)

</stderr_txt>
]]>

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