Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:01 (889255): wrapper (7.7.26015): starting
04:52:01 (889255): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 04:52:01] Arguments: --nthreads 9
[2025-10-12 04:52:01] Threads: 9
[2025-10-12 04:52:01] Checking for CVMFS
[2025-10-12 04:52:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:52:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:52:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:52:02] 2.13.2.0 4167112 129044 480400 151613 2 622 28360358 32935937 42379 16776704 0 454070255 99.675 374679746 17026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 04:52:02] CVMFS is ok
[2025-10-12 04:52:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:52:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:52:02] Further information can be found at the LHC@home message board.
[2025-10-12 04:52:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:52:02] Checking for apptainer binary...
[2025-10-12 04:52:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:52:02] Running /usr/bin/apptainer --version
[2025-10-12 04:52:02] apptainer version 1.4.3-1.el9
[2025-10-12 04:52:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:52:03] c7-16-8.aglt2.org
[2025-10-12 04:52:03] apptainer works
[2025-10-12 04:52:03] Set ATHENA_PROC_NUMBER=9
[2025-10-12 04:52:03] Set ATHENA_CORE_NUMBER=9
[2025-10-12 04:52:03] Starting ATLAS job with PandaID=6839319498
[2025-10-12 04:52:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:06:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:06:30] 2025-10-12 16:05:45,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:06:30] 2025-10-12 16:05:45,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:06:30] 2025-10-12 16:05:45,731 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:06:30] 2025-10-12 16:05:45,732 | INFO     | sum of square deviations: 23803245680.315277
[2025-10-12 12:06:30] 2025-10-12 16:05:45,757 | INFO     | sum of deviations: 206577624232.1975
[2025-10-12 12:06:30] 2025-10-12 16:05:45,757 | INFO     | mean x: 1760272152.2258823
[2025-10-12 12:06:30] 2025-10-12 16:05:45,757 | INFO     | mean y: 2404342.8729411764
[2025-10-12 12:06:30] 2025-10-12 16:05:45,757 | INFO     | -- intersect: -15274203061.538115
[2025-10-12 12:06:30] 2025-10-12 16:05:45,757 | INFO     | intersect: -15274203061.538115
[2025-10-12 12:06:30] 2025-10-12 16:05:45,758 | INFO     | chi2: 4.165385821999346
[2025-10-12 12:06:30] 2025-10-12 16:05:45,758 | INFO     | sum of square deviations: 22972989625.05721
[2025-10-12 12:06:30] 2025-10-12 16:05:45,782 | INFO     | sum of deviations: 230461294649.01437
[2025-10-12 12:06:30] 2025-10-12 16:05:45,782 | INFO     | mean x: 1760271999.7285714
[2025-10-12 12:06:30] 2025-10-12 16:05:45,782 | INFO     | mean y: 2408683.973809524
[2025-10-12 12:06:30] 2025-10-12 16:05:45,782 | INFO     | -- intersect: -17656353654.445427
[2025-10-12 12:06:30] 2025-10-12 16:05:45,782 | INFO     | intersect: -17656353654.445427
[2025-10-12 12:06:30] 2025-10-12 16:05:45,783 | INFO     | chi2: 3.4691417469692243
[2025-10-12 12:06:30] 2025-10-12 16:05:45,783 | INFO     | current chi2=3.4691417469692243 (change=16.714996035971783 %)
[2025-10-12 12:06:30] 2025-10-12 16:05:45,783 | INFO     | right removable region: 419
[2025-10-12 12:06:30] 2025-10-12 16:05:45,804 | INFO     | sum of square deviations: 22972931065.057217
[2025-10-12 12:06:30] 2025-10-12 16:05:45,808 | INFO     | sum of deviations: 90242981633.6143
[2025-10-12 12:06:30] 2025-10-12 16:05:45,829 | INFO     | mean x: 1760272304.7285714
[2025-10-12 12:06:30] 2025-10-12 16:05:45,829 | INFO     | mean y: 2425682.7071428574
[2025-10-12 12:06:30] 2025-10-12 16:05:45,829 | INFO     | -- intersect: -6912330680.593891
[2025-10-12 12:06:30] 2025-10-12 16:05:45,829 | INFO     | intersect: -6912330680.593891
[2025-10-12 12:06:30] 2025-10-12 16:05:45,830 | INFO     | chi2: 1.2265455422327052
[2025-10-12 12:06:30] 2025-10-12 16:05:45,830 | INFO     | current chi2=1.2265455422327052 (change=70.55385516139356 %)
[2025-10-12 12:06:30] 2025-10-12 16:05:45,830 | INFO     | sum of square deviations: 22162151699.792747
[2025-10-12 12:06:30] 2025-10-12 16:05:45,853 | INFO     | sum of deviations: 48684641297.71556
[2025-10-12 12:06:30] 2025-10-12 16:05:45,854 | INFO     | mean x: 1760272457.2313254
[2025-10-12 12:06:30] 2025-10-12 16:05:45,854 | INFO     | mean y: 2433490.898795181
[2025-10-12 12:06:30] 2025-10-12 16:05:45,854 | INFO     | -- intersect: -3864439831.1242127
[2025-10-12 12:06:30] 2025-10-12 16:05:45,854 | INFO     | intersect: -3864439831.1242127
[2025-10-12 12:06:30] 2025-10-12 16:05:45,854 | INFO     | chi2: 0.8847759762916514
[2025-10-12 12:06:30] 2025-10-12 16:05:45,854 | INFO     | current chi2=0.8847759762916514 (change=27.864400804793917 %)
[2025-10-12 12:06:30] 2025-10-12 16:05:45,855 | INFO     | sum of square deviations: 21370700336.487823
[2025-10-12 12:06:30] 2025-10-12 16:05:45,879 | INFO     | sum of deviations: 23614676040.536575
[2025-10-12 12:06:30] 2025-10-12 16:05:45,880 | INFO     | mean x: 1760272609.7317073
[2025-10-12 12:06:30] 2025-10-12 16:05:45,880 | INFO     | mean y: 2438317.8048780486
[2025-10-12 12:06:30] 2025-10-12 16:05:45,880 | INFO     | -- intersect: -1942667213.0078614
[2025-10-12 12:06:30] 2025-10-12 16:05:45,880 | INFO     | intersect: -1942667213.0078614
[2025-10-12 12:06:30] 2025-10-12 16:05:45,880 | INFO     | chi2: 0.7643737008049486
[2025-10-12 12:06:30] 2025-10-12 16:05:45,880 | INFO     | current chi2=0.7643737008049486 (change=13.608221596538266 %)
[2025-10-12 12:06:30] 2025-10-12 16:05:45,881 | INFO     | left removable region: 30
[2025-10-12 12:06:30] 2025-10-12 16:05:45,881 | INFO     | sum of square deviations: 18252154539.712143
[2025-10-12 12:06:30] 2025-10-12 16:05:45,884 | INFO     | sum of deviations: 22481530984.58353
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | mean x: 1760272884.2339332
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | mean y: 2448589.2133676093
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | -- intersect: -2165713492.809608
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | intersect: -2165713492.809608
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | chi2: 0.00563158604730312
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | -- intersect: -2165713492.809608
[2025-10-12 12:06:30] 2025-10-12 16:05:45,885 | INFO     | current memory leak: 1.23 B/s (using 389 data points, chi2=0.01)
[2025-10-12 12:06:30] 2025-10-12 16:05:45,887 | INFO     | could have reported an average CPU frequency of 3040 MHz (18 samples)
[2025-10-12 12:06:30] 2025-10-12 16:05:45,887 | INFO     | ..............................
[2025-10-12 12:06:30] 2025-10-12 16:05:45,887 | INFO     | . Timing measurements:
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . get job = 0 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . initial setup = 5 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . payload setup = 21 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . stage-in = 0 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . payload execution = 25909 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . stage-out = 4 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | . log creation = 0 s
[2025-10-12 12:06:30] 2025-10-12 16:05:45,888 | INFO     | ..............................
[2025-10-12 12:06:30] 2025-10-12 16:05:45,940 | INFO     | time since job start (25990s) is within the limit (172800.0s)
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | 
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | job summary report
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | --------------------------------------------------
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | PanDA job id: 6839319498
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | task id: 46676269
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | errors: (none)
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | pilot state: finished 
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | transexitcode: 0
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | exeerrorcode: 0
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | exeerrordiag: 
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | exitcode: 0
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | exitmsg: OK
[2025-10-12 12:06:30] 2025-10-12 16:05:46,138 | INFO     | cpuconsumptiontime: 36275 s
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | nevents: 400
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | neventsw: 0
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | pid: 902303
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | pgrp: 902303
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | corecount: 9
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | event service: False
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | sizes: {0: 2348857, 11: 2348857, 15: 2349147, 21: 2349175, 25934: 2385230, 25935: 2385229, 25939: 2394467, 25956: 2394605}
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | --------------------------------------------------
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | 
[2025-10-12 12:06:30] 2025-10-12 16:05:46,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 12:06:30] 2025-10-12 16:05:46,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:06:30] 2025-10-12 16:05:46,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:06:30] 2025-10-12 16:05:46,233 | INFO     | job 6839319498 has completed (purged errors)
[2025-10-12 12:06:30] 2025-10-12 16:05:46,233 | INFO     | overall cleanup function is called
[2025-10-12 12:06:30] 2025-10-12 16:05:47,266 | INFO     | --- collectZombieJob: --- 10, [902303]
[2025-10-12 12:06:30] 2025-10-12 16:05:47,266 | INFO     | zombie collector waiting for pid 902303
[2025-10-12 12:06:30] 2025-10-12 16:05:47,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:06:30] 2025-10-12 16:05:47,266 | INFO     | collected zombie processes
[2025-10-12 12:06:30] 2025-10-12 16:05:47,266 | INFO     | will attempt to kill all subprocesses of pid=902303
[2025-10-12 12:06:30] 2025-10-12 16:05:49,283 | INFO     | process IDs to be killed: [902303] (in reverse order)
[2025-10-12 12:06:30] 2025-10-12 16:05:49,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:06:30] 2025-10-12 16:05:49,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:06:30] 2025-10-12 16:05:49,563 | INFO     | did not find any defunct processes belonging to 902303
[2025-10-12 12:06:30] 2025-10-12 16:05:49,660 | INFO     | did not find any defunct processes belonging to 902303
[2025-10-12 12:06:30] 2025-10-12 16:05:49,660 | INFO     | ready for new job
[2025-10-12 12:06:30] 2025-10-12 16:05:49,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:06:30] 2025-10-12 16:05:49,677 | INFO     | ***************************************
[2025-10-12 12:06:30] 2025-10-12 16:05:49,678 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:06:30] 2025-10-12 16:05:49,678 | INFO     | ***************************************
[2025-10-12 12:06:30] 2025-10-12 16:05:49,678 | INFO     | 
[2025-10-12 12:06:30] 2025-10-12 16:05:49,703 | INFO     | architecture information:
[2025-10-12 12:06:30] 2025-10-12 16:05:49,707 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:06:30] 2025-10-12 16:05:49,742 | INFO     | cat /etc/os-release:
[2025-10-12 12:06:30] NAME="CentOS Linux"
[2025-10-12 12:06:30] VERSION="7 (Core)"
[2025-10-12 12:06:30] ID="centos"
[2025-10-12 12:06:30] ID_LIKE="rhel fedora"
[2025-10-12 12:06:30] VERSION_ID="7"
[2025-10-12 12:06:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:06:30] ANSI_COLOR="0;31"
[2025-10-12 12:06:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:06:30] HOME_URL="https://www.centos.org/"
[2025-10-12 12:06:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:06:30] 
[2025-10-12 12:06:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:06:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:06:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:06:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:06:30] 
[2025-10-12 12:06:30] 2025-10-12 16:05:49,742 | INFO     | ***************************************
[2025-10-12 12:06:30] 2025-10-12 16:05:50,246 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 12:06:30] 2025-10-12 16:05:50,271 | INFO     | sufficient remaining disk space (74209820672 B)
[2025-10-12 12:06:30] 2025-10-12 16:05:50,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:06:30] 2025-10-12 16:05:50,272 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:06:30] 2025-10-12 16:05:50,272 | INFO     | update_server=False
[2025-10-12 12:06:30] 2025-10-12 16:05:50,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:06:30] 2025-10-12 16:05:50,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:06:30] 2025-10-12 16:05:50,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:06:30] 2025-10-12 16:05:50,594 | INFO     | aborting loop
[2025-10-12 12:06:30] 2025-10-12 16:05:50,830 | INFO     | all data control threads have been joined
[2025-10-12 12:06:30] 2025-10-12 16:05:51,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:06:30] 2025-10-12 16:05:51,253 | INFO     | all payload control threads have been joined
[2025-10-12 12:06:30] 2025-10-12 16:05:51,278 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:51,434 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:51,434 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:51,477 | INFO     | all job control threads have been joined
[2025-10-12 12:06:30] 2025-10-12 16:05:51,600 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:51,836 | INFO     | [data] control thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,212 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,222 | INFO     | [job] validate thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,266 | INFO     | [payload] control thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,294 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,294 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,483 | INFO     | [job] control thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,682 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,739 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:52,873 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:05:53,619 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:06:30] 2025-10-12 16:05:57,683 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:06:30] 2025-10-12 16:06:21,707 | INFO     | PID=893584 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:06:30] 2025-10-12 16:06:21,707 | INFO     | .. there are 52 such processes running
[2025-10-12 12:06:30] 2025-10-12 16:06:21,707 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:06:30] 2025-10-12 16:06:21,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:06:30] 2025-10-12 16:06:21,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:06:30] 2025-10-12 16:06:22,066 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:06:30] 2025-10-12 16:06:22,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140382958909248)>', '<ExcThread(monitor, started 140382448891648)>']
[2025-10-12 12:06:30] 2025-10-12 16:06:22,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:06:30] 2025-10-12 16:06:22,714 | INFO     | [monitor] control thread has ended
[2025-10-12 12:06:30] 2025-10-12 16:06:27,191 | INFO     | all workflow threads have been joined
[2025-10-12 12:06:30] 2025-10-12 16:06:27,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:06:30] 2025-10-12 16:06:27,192 | INFO     | traces error code: 0
[2025-10-12 12:06:30] 2025-10-12 16:06:27,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:06:30] 2025-10-12 16:06:28,635 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:06:30] 2025-10-12 16:06:28,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:06:30] 2025-10-12 16:06:28,664 [wrapper] pilotpid: 893584
[2025-10-12 12:06:30] 2025-10-12 16:06:28,666 [wrapper] Pilot exit status: 0
[2025-10-12 12:06:30] 2025-10-12 16:06:28,741 [wrapper] pandaids: 6839319498
[2025-10-12 12:06:30] 2025-10-12 16:06:29,115 [wrapper] cleanup supervisor_pilot 2862837 893585
[2025-10-12 12:06:30] 2025-10-12 16:06:29,119 [wrapper] Test setup, not cleaning
[2025-10-12 12:06:30] 2025-10-12 16:06:29,123 [wrapper] apfmon messages muted
[2025-10-12 12:06:30] 2025-10-12 16:06:29,180 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:06:30] 2025-10-12 16:06:29,194 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:06:30]  *** Error codes and diagnostics ***
[2025-10-12 12:06:30]     "exeErrorCode": 0,
[2025-10-12 12:06:30]     "exeErrorDiag": "",
[2025-10-12 12:06:30]     "pilotErrorCode": 0,
[2025-10-12 12:06:30]     "pilotErrorDiag": "",
[2025-10-12 12:06:30]  *** Listing of results directory ***
[2025-10-12 12:06:30] total 416884
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 23:35 pilot3.tar.gz
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:52 queuedata.json
[2025-10-12 12:06:30] -rwx------. 1 boincer umatlas     36292 Oct 11 23:53 runpilot2-wrapper.sh
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 04:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:06:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 04:51 run_atlas
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 04:51 job.xml
[2025-10-12 12:06:30] -rw-r--r--. 2 boincer umatlas 221948862 Oct 12 04:52 EVNT.46676267._003222.pool.root.1
[2025-10-12 12:06:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:52 start_atlas.sh
[2025-10-12 12:06:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 04:52 shared
[2025-10-12 12:06:30] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 04:52 input.tar.gz
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 04:52 boinc_lockfile
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 04:52 pandaJob.out
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas    975520 Oct 12 04:52 agis_schedconf.cvmfs.json
[2025-10-12 12:06:30] drwx------. 5 boincer umatlas      4096 Oct 12 04:52 pilot3
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 12:00 init_data.xml
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas 193621705 Oct 12 12:04 HITS.46676269._070200.pool.root.1
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas       530 Oct 12 12:04 boinc_task_state.xml
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas      1047 Oct 12 12:05 memory_monitor_summary.json
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas    626021 Oct 12 12:05 log.46676269._070200.job.log.tgz.1
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas        95 Oct 12 12:05 pilot_heartbeat.json
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas      7805 Oct 12 12:05 heartbeat.json
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas      4823 Oct 12 12:06 pilotlog.txt
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:06 wrapper_checkpoint.txt
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas   3087202 Oct 12 12:06 log.46676269._070200.job.log.1
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas       357 Oct 12 12:06 output.list
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:06 runtime_log
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:06 boinc_mmap_file
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas   3727360 Oct 12 12:06 result.tar.gz
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 12:06 runtime_log.err
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas       661 Oct 12 12:06 1dEMDmHK2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjUiNDmbsrgWn.diag
[2025-10-12 12:06:30] -rw-r--r--. 1 boincer umatlas     21012 Oct 12 12:06 stderr.txt
[2025-10-12 12:06:30] HITS file was successfully produced:
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas 193621705 Oct 12 12:04 shared/HITS.pool.root.1
[2025-10-12 12:06:30]  *** Contents of shared directory: ***
[2025-10-12 12:06:30] total 410052
[2025-10-12 12:06:30] -rw-r--r--. 2 boincer umatlas 221948862 Oct 12 04:52 ATLAS.root_0
[2025-10-12 12:06:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:52 start_atlas.sh
[2025-10-12 12:06:30] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 04:52 input.tar.gz
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas 193621705 Oct 12 12:04 HITS.pool.root.1
[2025-10-12 12:06:30] -rw-------. 1 boincer umatlas   3727360 Oct 12 12:06 result.tar.gz
12:06:31 (889255): run_atlas exited; CPU time 37213.637369
12:06:31 (889255): called boinc_finish(0)

</stderr_txt>
]]>

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