Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:05:28 (3732235): wrapper (7.7.26015): starting
20:05:28 (3732235): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 20:05:28] Arguments: --nthreads 4
[2025-10-12 20:05:28] Threads: 4
[2025-10-12 20:05:28] Checking for CVMFS
[2025-10-12 20:05:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:05:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:05:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:05:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:05:29] 2.9.2.0 2039669 4657 98044 151631 3 9 26694793 36864000 0 130560 0 4376754 99.989 284506 1259 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 20:05:29] CVMFS is ok
[2025-10-12 20:05:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:05:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:05:29] Further information can be found at the LHC@home message board.
[2025-10-12 20:05:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:05:29] Checking for apptainer binary...
[2025-10-12 20:05:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:05:29] Running /usr/bin/apptainer --version
[2025-10-12 20:05:29] apptainer version 1.4.1-1.1
[2025-10-12 20:05:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:05:29] thA315a
[2025-10-12 20:05:29] apptainer works
[2025-10-12 20:05:29] Set ATHENA_PROC_NUMBER=4
[2025-10-12 20:05:29] Set ATHENA_CORE_NUMBER=4
[2025-10-12 20:05:29] Starting ATLAS job with PandaID=6839591205
[2025-10-12 20:05:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:14:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:14:51] 2025-10-12 19:14:21,067 | INFO     | architecture information:
[2025-10-12 21:14:51] 2025-10-12 19:14:21,067 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:14:51] 2025-10-12 19:14:21,080 | INFO     | cat /etc/os-release:
[2025-10-12 21:14:51] NAME="CentOS Linux"
[2025-10-12 21:14:51] VERSION="7 (Core)"
[2025-10-12 21:14:51] ID="centos"
[2025-10-12 21:14:51] ID_LIKE="rhel fedora"
[2025-10-12 21:14:51] VERSION_ID="7"
[2025-10-12 21:14:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:14:51] ANSI_COLOR="0;31"
[2025-10-12 21:14:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:14:51] HOME_URL="https://www.centos.org/"
[2025-10-12 21:14:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:14:51] 
[2025-10-12 21:14:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:14:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:14:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:14:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:14:51] 
[2025-10-12 21:14:51] 2025-10-12 19:14:21,080 | INFO     | ***************************************
[2025-10-12 21:14:51] 2025-10-12 19:14:21,584 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 21:14:51] 2025-10-12 19:14:21,600 | INFO     | sufficient remaining disk space (232656994304 B)
[2025-10-12 21:14:51] 2025-10-12 19:14:21,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:14:51] 2025-10-12 19:14:21,601 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:14:51] 2025-10-12 19:14:21,601 | INFO     | update_server=False
[2025-10-12 21:14:51] 2025-10-12 19:14:21,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:14:51] 2025-10-12 19:14:21,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:14:51] 2025-10-12 19:14:21,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:14:51] 2025-10-12 19:14:21,828 | INFO     | all data control threads have been joined
[2025-10-12 21:14:51] 2025-10-12 19:14:21,947 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:14:51] 2025-10-12 19:14:21,948 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:14:51] 2025-10-12 19:14:21,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:14:51] 2025-10-12 19:14:21,948 | INFO     | will abort loop
[2025-10-12 21:14:51] 2025-10-12 19:14:22,381 | INFO     | all job control threads have been joined
[2025-10-12 21:14:51] 2025-10-12 19:14:22,533 | INFO     | all payload control threads have been joined
[2025-10-12 21:14:51] 2025-10-12 19:14:22,606 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:22,607 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:22,618 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:22,705 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:22,834 | INFO     | [data] control thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:22,953 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:22,963 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:23,020 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:23,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:14:51] 2025-10-12 19:14:23,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:23,386 | INFO     | [job] control thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:23,539 | INFO     | [payload] control thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:23,563 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:23,804 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:24,018 | INFO     | [job] validate thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:25,066 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:25,608 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:14:51] 2025-10-12 19:14:41,121 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:14:51] 2025-10-12 19:14:42,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605538096960)>', '<ExcThread(monitor, started 140605174818560)>']
[2025-10-12 21:14:51] 2025-10-12 19:14:47,361 | INFO     | all workflow threads have been joined
[2025-10-12 21:14:51] 2025-10-12 19:14:47,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:14:51] 2025-10-12 19:14:47,362 | INFO     | traces error code: 0
[2025-10-12 21:14:51] 2025-10-12 19:14:47,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:14:51] 2025-10-12 19:14:51,660 | INFO     | PID=3736031 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:14:51] 2025-10-12 19:14:51,660 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:14:51] 2025-10-12 19:14:51,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:14:51] 2025-10-12 19:14:51,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:14:51] 2025-10-12 19:14:51,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:14:51] 2025-10-12 19:14:51,661 | INFO     | [monitor] control thread has ended
[2025-10-12 21:14:51] 2025-10-12 19:14:51,724 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:14:51] 2025-10-12 19:14:51,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:14:51] 2025-10-12 19:14:51,732 [wrapper] pilotpid: 3736031
[2025-10-12 21:14:51] 2025-10-12 19:14:51,735 [wrapper] Pilot exit status: 0
[2025-10-12 21:14:51] 2025-10-12 19:14:51,746 [wrapper] pandaids: 6839591205
[2025-10-12 21:14:51] 2025-10-12 19:14:51,767 [wrapper] cleanup supervisor_pilot 3752315 3736032
[2025-10-12 21:14:51] 2025-10-12 19:14:51,770 [wrapper] Test setup, not cleaning
[2025-10-12 21:14:51] 2025-10-12 19:14:51,774 [wrapper] apfmon messages muted
[2025-10-12 21:14:51] 2025-10-12 19:14:51,777 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:14:51] 2025-10-12 19:14:51,780 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:14:51]  *** Error codes and diagnostics ***
[2025-10-12 21:14:51]     "exeErrorCode": 0,
[2025-10-12 21:14:51]     "exeErrorDiag": "",
[2025-10-12 21:14:51]     "pilotErrorCode": 0,
[2025-10-12 21:14:51]     "pilotErrorDiag": "",
[2025-10-12 21:14:51]  *** Listing of results directory ***
[2025-10-12 21:14:51] total 409712
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:28 queuedata.json
[2025-10-12 21:14:51] -rwx------ 1 boinc boinc     36292 Oct 12 08:29 runpilot2-wrapper.sh
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:14:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:05 run_atlas
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:05 job.xml
[2025-10-12 21:14:51] -rw-r--r-- 2 boinc boinc 220188303 Oct 12 20:05 EVNT.46676267._004508.pool.root.1
[2025-10-12 21:14:51] -rw-r--r-- 2 boinc boinc    569680 Oct 12 20:05 input.tar.gz
[2025-10-12 21:14:51] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:05 start_atlas.sh
[2025-10-12 21:14:51] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:05 shared
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:05 boinc_setup_complete
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc      6371 Oct 12 20:05 init_data.xml
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:05 boinc_lockfile
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:05 pandaJob.out
[2025-10-12 21:14:51] -rw------- 1 boinc boinc    975528 Oct 12 20:05 agis_schedconf.cvmfs.json
[2025-10-12 21:14:51] -rw------- 1 boinc boinc   1560580 Oct 12 20:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:14:51] drwx------ 5 boinc boinc      4096 Oct 12 20:05 pilot3
[2025-10-12 21:14:51] -rw------- 1 boinc boinc 193702752 Oct 12 21:13 HITS.46676269._072637.pool.root.1
[2025-10-12 21:14:51] -rw------- 1 boinc boinc        95 Oct 12 21:13 pilot_heartbeat.json
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:14 boinc_task_state.xml
[2025-10-12 21:14:51] -rw------- 1 boinc boinc      1023 Oct 12 21:14 memory_monitor_summary.json
[2025-10-12 21:14:51] -rw------- 1 boinc boinc    267535 Oct 12 21:14 log.46676269._072637.job.log.tgz.1
[2025-10-12 21:14:51] -rw------- 1 boinc boinc      7768 Oct 12 21:14 heartbeat.json
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:14 boinc_mmap_file
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:14 wrapper_checkpoint.txt
[2025-10-12 21:14:51] -rw------- 1 boinc boinc       747 Oct 12 21:14 pilotlog.txt
[2025-10-12 21:14:51] -rw------- 1 boinc boinc    615422 Oct 12 21:14 log.46676269._072637.job.log.1
[2025-10-12 21:14:51] -rw------- 1 boinc boinc       357 Oct 12 21:14 output.list
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:14 runtime_log
[2025-10-12 21:14:51] -rw------- 1 boinc boinc    901120 Oct 12 21:14 result.tar.gz
[2025-10-12 21:14:51] -rw------- 1 boinc boinc       659 Oct 12 21:14 wLIODmyk4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeqiNDm5Db7Hn.diag
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc      8782 Oct 12 21:14 runtime_log.err
[2025-10-12 21:14:51] -rw-r--r-- 1 boinc boinc      9200 Oct 12 21:14 stderr.txt
[2025-10-12 21:14:51] HITS file was successfully produced:
[2025-10-12 21:14:51] -rw------- 1 boinc boinc 193702752 Oct 12 21:13 shared/HITS.pool.root.1
[2025-10-12 21:14:51]  *** Contents of shared directory: ***
[2025-10-12 21:14:51] total 405656
[2025-10-12 21:14:51] -rw-r--r-- 2 boinc boinc 220188303 Oct 12 20:05 ATLAS.root_0
[2025-10-12 21:14:51] -rw-r--r-- 2 boinc boinc    569680 Oct 12 20:05 input.tar.gz
[2025-10-12 21:14:51] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:05 start_atlas.sh
[2025-10-12 21:14:51] -rw------- 1 boinc boinc 193702752 Oct 12 21:13 HITS.pool.root.1
[2025-10-12 21:14:51] -rw------- 1 boinc boinc    901120 Oct 12 21:14 result.tar.gz
21:14:53 (3732235): run_atlas exited; CPU time 15522.117229
21:14:53 (3732235): called boinc_finish(0)

</stderr_txt>
]]>

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