Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:56 (3273471): wrapper (7.7.26015): starting
19:20:56 (3273471): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 19:20:56] Arguments: --nthreads 3
[2025-10-12 19:20:56] Threads: 3
[2025-10-12 19:20:56] Checking for CVMFS
[2025-10-12 19:20:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:20:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:20:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:20:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:20:56] 2.9.2.0 796922 4637 87360 151629 3 56 32740465 36864001 0 130560 0 3708815 99.991 160220 1051 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:20:56] CVMFS is ok
[2025-10-12 19:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:20:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:20:56] Further information can be found at the LHC@home message board.
[2025-10-12 19:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:20:56] Checking for apptainer binary...
[2025-10-12 19:20:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:20:56] Running /usr/bin/apptainer --version
[2025-10-12 19:20:56] apptainer version 1.4.1-1.1
[2025-10-12 19:20:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:20:56] atlasA303
[2025-10-12 19:20:56] apptainer works
[2025-10-12 19:20:56] Set ATHENA_PROC_NUMBER=3
[2025-10-12 19:20:56] Set ATHENA_CORE_NUMBER=3
[2025-10-12 19:20:56] Starting ATLAS job with PandaID=6839164590
[2025-10-12 19:20:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:44:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:44:35] 
[2025-10-12 20:44:35] 2025-10-12 18:44:04,784 | INFO     | ***************************************
[2025-10-12 20:44:35] 2025-10-12 18:44:05,287 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 20:44:35] 2025-10-12 18:44:05,301 | INFO     | sufficient remaining disk space (372069367808 B)
[2025-10-12 20:44:35] 2025-10-12 18:44:05,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:44:35] 2025-10-12 18:44:05,301 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:44:35] 2025-10-12 18:44:05,301 | INFO     | update_server=False
[2025-10-12 20:44:35] 2025-10-12 18:44:05,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:44:35] 2025-10-12 18:44:05,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:44:35] 2025-10-12 18:44:05,318 | INFO     | all data control threads have been joined
[2025-10-12 20:44:35] 2025-10-12 18:44:06,131 | INFO     | all job control threads have been joined
[2025-10-12 20:44:35] 2025-10-12 18:44:06,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:44:35] 2025-10-12 18:44:06,191 | INFO     | aborting loop
[2025-10-12 20:44:35] 2025-10-12 18:44:06,223 | INFO     | all payload control threads have been joined
[2025-10-12 20:44:35] 2025-10-12 18:44:06,307 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:06,314 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:06,319 | INFO     | [data] control thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:06,377 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:06,879 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,136 | INFO     | [job] control thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,168 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,197 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,228 | INFO     | [payload] control thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:44:35] 2025-10-12 18:44:07,307 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,450 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,496 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:44:35] 2025-10-12 18:44:07,693 | INFO     | [job] validate thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:07,750 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:08,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:44:35] 2025-10-12 18:44:09,247 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:11,239 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:16,224 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:44:35] 2025-10-12 18:44:17,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:44:35] 2025-10-12 18:44:17,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941185357632)>', '<ExcThread(monitor, started 139940520236800)>']
[2025-10-12 20:44:35] 2025-10-12 18:44:22,382 | INFO     | all workflow threads have been joined
[2025-10-12 20:44:35] 2025-10-12 18:44:22,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:44:35] 2025-10-12 18:44:22,383 | INFO     | traces error code: 0
[2025-10-12 20:44:35] 2025-10-12 18:44:22,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:44:35] 2025-10-12 18:44:34,901 | INFO     | PID=3277215 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:44:35] 2025-10-12 18:44:34,901 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:44:35] 2025-10-12 18:44:34,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:44:35] 2025-10-12 18:44:34,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:44:35] 2025-10-12 18:44:34,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:44:35] 2025-10-12 18:44:34,902 | INFO     | [monitor] control thread has ended
[2025-10-12 20:44:35] 2025-10-12 18:44:34,948 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:44:35] 2025-10-12 18:44:34,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:44:35] 2025-10-12 18:44:34,953 [wrapper] pilotpid: 3277215
[2025-10-12 20:44:35] 2025-10-12 18:44:34,956 [wrapper] Pilot exit status: 0
[2025-10-12 20:44:35] 2025-10-12 18:44:34,964 [wrapper] pandaids: 6839164590
[2025-10-12 20:44:35] 2025-10-12 18:44:34,980 [wrapper] cleanup supervisor_pilot 3312761 3277216
[2025-10-12 20:44:35] 2025-10-12 18:44:34,983 [wrapper] Test setup, not cleaning
[2025-10-12 20:44:35] 2025-10-12 18:44:34,986 [wrapper] apfmon messages muted
[2025-10-12 20:44:35] 2025-10-12 18:44:34,988 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:44:35] 2025-10-12 18:44:34,991 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:44:35]  *** Error codes and diagnostics ***
[2025-10-12 20:44:35]     "exeErrorCode": 0,
[2025-10-12 20:44:35]     "exeErrorDiag": "",
[2025-10-12 20:44:35]     "pilotErrorCode": 0,
[2025-10-12 20:44:35]     "pilotErrorDiag": "",
[2025-10-12 20:44:35]  *** Listing of results directory ***
[2025-10-12 20:44:35] total 412420
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:48 queuedata.json
[2025-10-12 20:44:35] -rwx------ 1 boinc boinc     36292 Oct 12 02:49 runpilot2-wrapper.sh
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:44:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:20 run_atlas
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:20 job.xml
[2025-10-12 20:44:35] -rw-r--r-- 2 boinc boinc 220862674 Oct 12 19:20 EVNT.46676267._003113.pool.root.1
[2025-10-12 20:44:35] -rw-r--r-- 2 boinc boinc    569681 Oct 12 19:20 input.tar.gz
[2025-10-12 20:44:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:20 start_atlas.sh
[2025-10-12 20:44:35] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:20 shared
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:20 boinc_setup_complete
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc      6450 Oct 12 19:20 init_data.xml
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:20 boinc_lockfile
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc      2550 Oct 12 19:20 pandaJob.out
[2025-10-12 20:44:35] -rw------- 1 boinc boinc    975528 Oct 12 19:21 agis_schedconf.cvmfs.json
[2025-10-12 20:44:35] -rw------- 1 boinc boinc   1560580 Oct 12 19:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:44:35] drwx------ 5 boinc boinc      4096 Oct 12 19:21 pilot3
[2025-10-12 20:44:35] -rw------- 1 boinc boinc 195606212 Oct 12 20:43 HITS.46676269._068081.pool.root.1
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc       529 Oct 12 20:43 boinc_task_state.xml
[2025-10-12 20:44:35] -rw------- 1 boinc boinc      1017 Oct 12 20:43 memory_monitor_summary.json
[2025-10-12 20:44:35] -rw------- 1 boinc boinc    249403 Oct 12 20:43 log.46676269._068081.job.log.tgz.1
[2025-10-12 20:44:35] -rw------- 1 boinc boinc      7761 Oct 12 20:44 heartbeat.json
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:44 boinc_mmap_file
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:44 wrapper_checkpoint.txt
[2025-10-12 20:44:35] -rw------- 1 boinc boinc       747 Oct 12 20:44 pilotlog.txt
[2025-10-12 20:44:35] -rw------- 1 boinc boinc        95 Oct 12 20:44 pilot_heartbeat.json
[2025-10-12 20:44:35] -rw------- 1 boinc boinc    731774 Oct 12 20:44 log.46676269._068081.job.log.1
[2025-10-12 20:44:35] -rw------- 1 boinc boinc       357 Oct 12 20:44 output.list
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:44 runtime_log
[2025-10-12 20:44:35] -rw------- 1 boinc boinc   1003520 Oct 12 20:44 result.tar.gz
[2025-10-12 20:44:35] -rw------- 1 boinc boinc       661 Oct 12 20:44 O31KDmwRzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY8hNDmUKP5gn.diag
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc      8792 Oct 12 20:44 runtime_log.err
[2025-10-12 20:44:35] -rw-r--r-- 1 boinc boinc      8138 Oct 12 20:44 stderr.txt
[2025-10-12 20:44:35] HITS file was successfully produced:
[2025-10-12 20:44:35] -rw------- 1 boinc boinc 195606212 Oct 12 20:43 shared/HITS.pool.root.1
[2025-10-12 20:44:35]  *** Contents of shared directory: ***
[2025-10-12 20:44:35] total 408276
[2025-10-12 20:44:35] -rw-r--r-- 2 boinc boinc 220862674 Oct 12 19:20 ATLAS.root_0
[2025-10-12 20:44:35] -rw-r--r-- 2 boinc boinc    569681 Oct 12 19:20 input.tar.gz
[2025-10-12 20:44:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:20 start_atlas.sh
[2025-10-12 20:44:35] -rw------- 1 boinc boinc 195606212 Oct 12 20:43 HITS.pool.root.1
[2025-10-12 20:44:35] -rw------- 1 boinc boinc   1003520 Oct 12 20:44 result.tar.gz
20:44:36 (3273471): run_atlas exited; CPU time 14332.678861
20:44:36 (3273471): called boinc_finish(0)

</stderr_txt>
]]>

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