Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:39:38 (3484573): wrapper (7.7.26015): starting
19:39:38 (3484573): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 19:39:38] Arguments: --nthreads 4
[2025-10-12 19:39:38] Threads: 4
[2025-10-12 19:39:38] Checking for CVMFS
[2025-10-12 19:39:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:39:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:39:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:39:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:39:38] 2.9.2.0 1879706 4556 95968 151629 3 57 22143074 36864000 0 130560 0 3996742 99.992 156196 846 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:39:38] CVMFS is ok
[2025-10-12 19:39:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:39:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:39:38] Further information can be found at the LHC@home message board.
[2025-10-12 19:39:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:39:38] Checking for apptainer binary...
[2025-10-12 19:39:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:39:38] Running /usr/bin/apptainer --version
[2025-10-12 19:39:38] apptainer version 1.4.1-1.1
[2025-10-12 19:39:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:39:39] thA317
[2025-10-12 19:39:39] apptainer works
[2025-10-12 19:39:39] Set ATHENA_PROC_NUMBER=4
[2025-10-12 19:39:39] Set ATHENA_CORE_NUMBER=4
[2025-10-12 19:39:39] Starting ATLAS job with PandaID=6839163780
[2025-10-12 19:39:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:54:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:54:13] 2025-10-12 18:53:42,078 | INFO     | cat /etc/os-release:
[2025-10-12 20:54:13] NAME="CentOS Linux"
[2025-10-12 20:54:13] VERSION="7 (Core)"
[2025-10-12 20:54:13] ID="centos"
[2025-10-12 20:54:13] ID_LIKE="rhel fedora"
[2025-10-12 20:54:13] VERSION_ID="7"
[2025-10-12 20:54:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:54:13] ANSI_COLOR="0;31"
[2025-10-12 20:54:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:54:13] HOME_URL="https://www.centos.org/"
[2025-10-12 20:54:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:54:13] 
[2025-10-12 20:54:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:54:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:54:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:54:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:54:13] 
[2025-10-12 20:54:13] 2025-10-12 18:53:42,079 | INFO     | ***************************************
[2025-10-12 20:54:13] 2025-10-12 18:53:42,582 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 20:54:13] 2025-10-12 18:53:42,600 | INFO     | sufficient remaining disk space (237547552768 B)
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | INFO     | update_server=False
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:54:13] 2025-10-12 18:53:42,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:54:13] 2025-10-12 18:53:42,608 | INFO     | all job control threads have been joined
[2025-10-12 20:54:13] 2025-10-12 18:53:42,635 | INFO     | all payload control threads have been joined
[2025-10-12 20:54:13] 2025-10-12 18:53:43,049 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:54:13] 2025-10-12 18:53:43,049 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:54:13] 2025-10-12 18:53:43,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:54:13] 2025-10-12 18:53:43,049 | INFO     | will abort loop
[2025-10-12 20:54:13] 2025-10-12 18:53:43,378 | INFO     | all data control threads have been joined
[2025-10-12 20:54:13] 2025-10-12 18:53:43,606 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:43,607 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:43,614 | INFO     | [job] control thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:43,641 | INFO     | [payload] control thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:43,741 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,055 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,120 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,136 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,198 | INFO     | [job] validate thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,383 | INFO     | [data] control thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,607 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,642 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,650 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:44,780 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:46,608 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:52,860 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:54:13] 2025-10-12 18:53:53,196 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:54:13] 2025-10-12 18:53:54,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:54:13] 2025-10-12 18:53:55,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899865483072)>', '<ExcThread(monitor, started 139899055351552)>']
[2025-10-12 20:54:13] 2025-10-12 18:54:00,677 | INFO     | all workflow threads have been joined
[2025-10-12 20:54:13] 2025-10-12 18:54:00,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:54:13] 2025-10-12 18:54:00,677 | INFO     | traces error code: 0
[2025-10-12 20:54:13] 2025-10-12 18:54:00,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:54:13] 2025-10-12 18:54:12,983 | INFO     | PID=3488367 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:54:13] 2025-10-12 18:54:12,983 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:54:13] 2025-10-12 18:54:12,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:54:13] 2025-10-12 18:54:12,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:54:13] 2025-10-12 18:54:12,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:54:13] 2025-10-12 18:54:12,984 | INFO     | [monitor] control thread has ended
[2025-10-12 20:54:13] 2025-10-12 18:54:13,062 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:54:13] 2025-10-12 18:54:13,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:54:13] 2025-10-12 18:54:13,071 [wrapper] pilotpid: 3488367
[2025-10-12 20:54:13] 2025-10-12 18:54:13,075 [wrapper] Pilot exit status: 0
[2025-10-12 20:54:13] 2025-10-12 18:54:13,087 [wrapper] pandaids: 6839163780
[2025-10-12 20:54:13] 2025-10-12 18:54:13,110 [wrapper] cleanup supervisor_pilot 3505279 3488368
[2025-10-12 20:54:13] 2025-10-12 18:54:13,115 [wrapper] Test setup, not cleaning
[2025-10-12 20:54:13] 2025-10-12 18:54:13,118 [wrapper] apfmon messages muted
[2025-10-12 20:54:13] 2025-10-12 18:54:13,122 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:54:13] 2025-10-12 18:54:13,127 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:54:13]  *** Error codes and diagnostics ***
[2025-10-12 20:54:13]     "exeErrorCode": 0,
[2025-10-12 20:54:13]     "exeErrorDiag": "",
[2025-10-12 20:54:13]     "pilotErrorCode": 0,
[2025-10-12 20:54:13]     "pilotErrorDiag": "",
[2025-10-12 20:54:13]  *** Listing of results directory ***
[2025-10-12 20:54:13] total 415548
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:17 queuedata.json
[2025-10-12 20:54:13] -rwx------ 1 boinc boinc     36292 Oct 12 02:19 runpilot2-wrapper.sh
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:54:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:39 run_atlas
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:39 job.xml
[2025-10-12 20:54:13] -rw-r--r-- 2 boinc boinc 222927020 Oct 12 19:39 EVNT.46676267._002753.pool.root.1
[2025-10-12 20:54:13] -rw-r--r-- 2 boinc boinc    569678 Oct 12 19:39 input.tar.gz
[2025-10-12 20:54:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:39 start_atlas.sh
[2025-10-12 20:54:13] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:39 shared
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:39 boinc_setup_complete
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc      6377 Oct 12 19:39 init_data.xml
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:39 boinc_lockfile
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc      2550 Oct 12 19:39 pandaJob.out
[2025-10-12 20:54:13] -rw------- 1 boinc boinc    975528 Oct 12 19:39 agis_schedconf.cvmfs.json
[2025-10-12 20:54:13] -rw------- 1 boinc boinc   1560580 Oct 12 19:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:54:13] drwx------ 5 boinc boinc      4096 Oct 12 19:39 pilot3
[2025-10-12 20:54:13] -rw------- 1 boinc boinc 196864217 Oct 12 20:53 HITS.46676269._067484.pool.root.1
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc       529 Oct 12 20:53 boinc_task_state.xml
[2025-10-12 20:54:13] -rw------- 1 boinc boinc      1023 Oct 12 20:53 memory_monitor_summary.json
[2025-10-12 20:54:13] -rw------- 1 boinc boinc    261553 Oct 12 20:53 log.46676269._067484.job.log.tgz.1
[2025-10-12 20:54:13] -rw------- 1 boinc boinc      7760 Oct 12 20:53 heartbeat.json
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:53 boinc_mmap_file
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:53 wrapper_checkpoint.txt
[2025-10-12 20:54:13] -rw------- 1 boinc boinc       747 Oct 12 20:54 pilotlog.txt
[2025-10-12 20:54:13] -rw------- 1 boinc boinc        95 Oct 12 20:54 pilot_heartbeat.json
[2025-10-12 20:54:13] -rw------- 1 boinc boinc    656624 Oct 12 20:54 log.46676269._067484.job.log.1
[2025-10-12 20:54:13] -rw------- 1 boinc boinc       357 Oct 12 20:54 output.list
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:54 runtime_log
[2025-10-12 20:54:13] -rw------- 1 boinc boinc    942080 Oct 12 20:54 result.tar.gz
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc      8777 Oct 12 20:54 runtime_log.err
[2025-10-12 20:54:13] -rw------- 1 boinc boinc       658 Oct 12 20:54 WM6KDm8yyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD2hNDm8RLY8m.diag
[2025-10-12 20:54:13] -rw-r--r-- 1 boinc boinc      9110 Oct 12 20:54 stderr.txt
[2025-10-12 20:54:13] HITS file was successfully produced:
[2025-10-12 20:54:13] -rw------- 1 boinc boinc 196864217 Oct 12 20:53 shared/HITS.pool.root.1
[2025-10-12 20:54:13]  *** Contents of shared directory: ***
[2025-10-12 20:54:13] total 411460
[2025-10-12 20:54:13] -rw-r--r-- 2 boinc boinc 222927020 Oct 12 19:39 ATLAS.root_0
[2025-10-12 20:54:13] -rw-r--r-- 2 boinc boinc    569678 Oct 12 19:39 input.tar.gz
[2025-10-12 20:54:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:39 start_atlas.sh
[2025-10-12 20:54:13] -rw------- 1 boinc boinc 196864217 Oct 12 20:53 HITS.pool.root.1
[2025-10-12 20:54:13] -rw------- 1 boinc boinc    942080 Oct 12 20:54 result.tar.gz
20:54:14 (3484573): run_atlas exited; CPU time 16566.796074
20:54:14 (3484573): called boinc_finish(0)

</stderr_txt>
]]>

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