Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:59:48 (1088971): wrapper (7.7.26015): starting
12:59:48 (1088971): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 12:59:48] Arguments: --nthreads 4
[2025-10-13 12:59:48] Threads: 4
[2025-10-13 12:59:48] Checking for CVMFS
[2025-10-13 12:59:48] No cvmfs_config command found, will try listing directly
[2025-10-13 12:59:48] CVMFS is ok
[2025-10-13 12:59:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:59:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:59:48] Further information can be found at the LHC@home message board.
[2025-10-13 12:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:59:48] Checking for apptainer binary...
[2025-10-13 12:59:48] which: no apptainer in ((null))
[2025-10-13 12:59:48] apptainer is not installed, using version from CVMFS
[2025-10-13 12:59:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:59:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-13 12:59:49] apptainer works
[2025-10-13 12:59:49] Set ATHENA_PROC_NUMBER=4
[2025-10-13 12:59:49] Set ATHENA_CORE_NUMBER=4
[2025-10-13 12:59:49] Starting ATLAS job with PandaID=6839590999
[2025-10-13 12:59:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:04:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:04:47] 2025-10-13 13:52:23,591 | INFO     | intersect: -602021456.6681721
[2025-10-13 16:04:47] 2025-10-13 13:52:23,591 | INFO     | chi2: 0.0009419447310340072
[2025-10-13 16:04:47] 2025-10-13 13:52:23,591 | INFO     | current chi2=0.0009419447310340072 (change=39.69964834084771 %)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,592 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,592 | INFO     | sum of deviations: 13880367.000000123
[2025-10-13 16:04:47] 2025-10-13 13:52:23,593 | INFO     | mean x: 1760358958.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,593 | INFO     | mean y: 2347746.510067114
[2025-10-13 16:04:47] 2025-10-13 13:52:23,593 | INFO     | -- intersect: -21474598.87422751
[2025-10-13 16:04:47] 2025-10-13 13:52:23,593 | INFO     | intersect: -21474598.87422751
[2025-10-13 16:04:47] 2025-10-13 13:52:23,593 | INFO     | chi2: 0.0006967984547869647
[2025-10-13 16:04:47] 2025-10-13 13:52:23,593 | INFO     | current chi2=0.0006967984547869647 (change=26.025547802357412 %)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,594 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,594 | INFO     | sum of deviations: -289668382.00000006
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | mean x: 1760359110.5
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | mean y: 2348211.222222222
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | -- intersect: 553101894.1390423
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | intersect: 553101894.1390423
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | chi2: 0.0005086282091955405
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | current chi2=0.0005086282091955405 (change=27.004974580340363 %)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,595 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,596 | INFO     | sum of deviations: -532950290.0000001
[2025-10-13 16:04:47] 2025-10-13 13:52:23,596 | INFO     | mean x: 1760359263.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,596 | INFO     | mean y: 2348607.9352517985
[2025-10-13 16:04:47] 2025-10-13 13:52:23,597 | INFO     | -- intersect: 1128995093.7956107
[2025-10-13 16:04:47] 2025-10-13 13:52:23,597 | INFO     | intersect: 1128995093.7956107
[2025-10-13 16:04:47] 2025-10-13 13:52:23,597 | INFO     | chi2: 0.000341129876448736
[2025-10-13 16:04:47] 2025-10-13 13:52:23,597 | INFO     | current chi2=0.000341129876448736 (change=32.93138872728357 %)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,597 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 16:04:47] 2025-10-13 13:52:23,598 | INFO     | sum of deviations: -686351839.5
[2025-10-13 16:04:47] 2025-10-13 13:52:23,598 | INFO     | mean x: 1760359415.5
[2025-10-13 16:04:47] 2025-10-13 13:52:23,598 | INFO     | mean y: 2348876.231343284
[2025-10-13 16:04:47] 2025-10-13 13:52:23,598 | INFO     | -- intersect: 1621843526.2745392
[2025-10-13 16:04:47] 2025-10-13 13:52:23,598 | INFO     | intersect: 1621843526.2745392
[2025-10-13 16:04:47] 2025-10-13 13:52:23,599 | INFO     | chi2: 0.00023358320652727143
[2025-10-13 16:04:47] 2025-10-13 13:52:23,599 | INFO     | current chi2=0.00023358320652727143 (change=31.526605362467087 %)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,599 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | sum of deviations: -724360298.9999999
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | mean x: 1760359568.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | mean y: 2348948.085271318
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | -- intersect: 1918080130.0246344
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | intersect: 1918080130.0246344
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | chi2: 0.00020178054978340875
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | current chi2=0.00020178054978340875 (change=13.615129793224087 %)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,600 | INFO     | left removable region: 80
[2025-10-13 16:04:47] 2025-10-13 13:52:23,601 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,601 | INFO     | sum of deviations: -217797023.00000006
[2025-10-13 16:04:47] 2025-10-13 13:52:23,601 | INFO     | mean x: 1760360605.0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,601 | INFO     | mean y: 2347399.987951807
[2025-10-13 16:04:47] 2025-10-13 13:52:23,601 | INFO     | -- intersect: 2165085471.5744696
[2025-10-13 16:04:47] 2025-10-13 13:52:23,601 | INFO     | intersect: 2165085471.5744696
[2025-10-13 16:04:47] 2025-10-13 13:52:23,602 | INFO     | chi2: 5.862567186632648e-05
[2025-10-13 16:04:47] 2025-10-13 13:52:23,602 | INFO     | -- intersect: 2165085471.5744696
[2025-10-13 16:04:47] 2025-10-13 13:52:23,602 | INFO     | current memory leak: -1.23 B/s (using 83 data points, chi2=0.00)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,602 | INFO     | could have reported an average CPU frequency of 2725 MHz (9 samples)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | ..............................
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . Timing measurements:
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . get job = 0 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . initial setup = 1 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . payload setup = 5 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . stage-in = 0 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . payload execution = 10311 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . stage-out = 0 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | . log creation = 0 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,603 | INFO     | ..............................
[2025-10-13 16:04:47] 2025-10-13 13:52:23,704 | INFO     | 
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | job summary report
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | --------------------------------------------------
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | PanDA job id: 6839590999
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | task id: 46676269
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | errors: (none)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | pilot state: finished 
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | transexitcode: 0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | exeerrorcode: 0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,705 | INFO     | exeerrordiag: 
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | exitcode: 0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | exitmsg: OK
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | cpuconsumptiontime: 39758 s
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | nevents: 400
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | neventsw: 0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | pid: 1114214
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | pgrp: 1114214
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | corecount: 4
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | event service: False
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | sizes: {0: 2348646, 1: 2348845, 5: 2349107, 12: 2349163, 10320: 2377941, 10321: 2387145, 10329: 2387347}
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | --------------------------------------------------
[2025-10-13 16:04:47] 2025-10-13 13:52:23,706 | INFO     | 
[2025-10-13 16:04:47] 2025-10-13 13:52:23,707 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-10-13 16:04:47] 2025-10-13 13:52:23,728 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:04:47] 2025-10-13 13:52:23,730 | INFO     | job 6839590999 has completed (purged errors)
[2025-10-13 16:04:47] 2025-10-13 13:52:23,730 | INFO     | overall cleanup function is called
[2025-10-13 16:04:47] 2025-10-13 13:52:24,737 | INFO     | --- collectZombieJob: --- 10, [1114214]
[2025-10-13 16:04:47] 2025-10-13 13:52:24,737 | INFO     | zombie collector waiting for pid 1114214
[2025-10-13 16:04:47] 2025-10-13 13:52:24,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:04:47] 2025-10-13 13:52:24,738 | INFO     | collected zombie processes
[2025-10-13 16:04:47] 2025-10-13 13:52:24,738 | INFO     | will attempt to kill all subprocesses of pid=1114214
[2025-10-13 16:04:47] 2025-10-13 13:52:25,146 | INFO     | process IDs to be killed: [1114214] (in reverse order)
[2025-10-13 16:04:47] 2025-10-13 13:52:25,252 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:04:47] 2025-10-13 13:52:25,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:04:47] 2025-10-13 13:52:25,267 | INFO     | did not find any defunct processes belonging to 1114214
[2025-10-13 16:04:47] 2025-10-13 13:52:25,281 | INFO     | did not find any defunct processes belonging to 1114214
[2025-10-13 16:04:47] 2025-10-13 13:52:25,281 | INFO     | ready for new job
[2025-10-13 16:04:47] 2025-10-13 13:52:25,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:04:47] 2025-10-13 13:52:25,283 | INFO     | ***************************************
[2025-10-13 16:04:47] 2025-10-13 13:52:25,284 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:04:47] 2025-10-13 13:52:25,284 | INFO     | ***************************************
[2025-10-13 16:04:47] 2025-10-13 13:52:25,284 | INFO     | 
[2025-10-13 16:04:47] 2025-10-13 13:52:25,287 | INFO     | architecture information:
[2025-10-13 16:04:47] 2025-10-13 13:52:25,288 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:04:47] 2025-10-13 13:52:25,303 | INFO     | cat /etc/os-release:
[2025-10-13 16:04:47] NAME="CentOS Linux"
[2025-10-13 16:04:47] VERSION="7 (Core)"
[2025-10-13 16:04:47] ID="centos"
[2025-10-13 16:04:47] ID_LIKE="rhel fedora"
[2025-10-13 16:04:47] VERSION_ID="7"
[2025-10-13 16:04:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:04:47] ANSI_COLOR="0;31"
[2025-10-13 16:04:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:04:47] HOME_URL="https://www.centos.org/"
[2025-10-13 16:04:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:04:47] 
[2025-10-13 16:04:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:04:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:04:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:04:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:04:47] 
[2025-10-13 16:04:47] 2025-10-13 13:52:25,304 | INFO     | ***************************************
[2025-10-13 16:04:47] 2025-10-13 13:52:25,806 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-10-13 16:04:47] 2025-10-13 13:52:25,823 | INFO     | sufficient remaining disk space (692745928704 B)
[2025-10-13 16:04:47] 2025-10-13 13:52:25,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:04:47] 2025-10-13 13:52:25,824 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:04:47] 2025-10-13 13:52:25,824 | INFO     | update_server=False
[2025-10-13 16:04:47] 2025-10-13 13:52:25,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:04:47] 2025-10-13 13:52:25,997 | INFO     | all job control threads have been joined
[2025-10-13 16:04:47] 2025-10-13 13:52:26,287 | INFO     | all data control threads have been joined
[2025-10-13 16:04:47] 2025-10-13 13:52:26,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:04:47] 2025-10-13 13:52:26,386 | INFO     | all payload control threads have been joined
[2025-10-13 16:04:47] 2025-10-13 13:52:26,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:04:47] 2025-10-13 13:52:26,753 | INFO     | aborting loop
[2025-10-13 16:04:47] 2025-10-13 13:52:26,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:04:47] 2025-10-13 13:52:26,829 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:26,871 | INFO     | [job] validate thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,000 | INFO     | [job] control thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,126 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,138 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,218 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,292 | INFO     | [data] control thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,378 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,391 | INFO     | [payload] control thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,604 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:27,759 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:28,071 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:28,352 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:28,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:04:47] 2025-10-13 13:52:29,716 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:30,832 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:36,714 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:04:47] 2025-10-13 13:52:37,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:04:47] 2025-10-13 13:52:57,165 | INFO     | PID=1094937 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:04:47] 2025-10-13 13:52:57,165 | INFO     | .. there are 3 such processes running
[2025-10-13 16:04:47] 2025-10-13 13:52:57,165 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:04:47] 2025-10-13 13:52:57,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:04:47] 2025-10-13 13:52:57,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:04:47] 2025-10-13 13:53:14,672 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:04:47] 2025-10-13 13:53:15,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23084509624128)>', '<ExcThread(monitor, started 23084270581504)>']
[2025-10-13 16:04:47] 2025-10-13 13:53:16,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:04:47] 2025-10-13 13:53:16,252 | INFO     | [monitor] control thread has ended
[2025-10-13 16:04:47] 2025-10-13 13:53:20,485 | INFO     | all workflow threads have been joined
[2025-10-13 16:04:47] 2025-10-13 13:53:20,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:04:47] 2025-10-13 13:53:20,486 | INFO     | traces error code: 0
[2025-10-13 16:04:47] 2025-10-13 13:53:20,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:04:47] 2025-10-13 13:53:20,645 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:04:47] 2025-10-13 13:53:20,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:04:47] 2025-10-13 13:53:20,650 [wrapper] pilotpid: 1094937
[2025-10-13 16:04:47] 2025-10-13 13:53:20,653 [wrapper] Pilot exit status: 0
[2025-10-13 16:04:47] 2025-10-13 13:53:20,663 [wrapper] pandaids: 6839590999
[2025-10-13 16:04:47] 2025-10-13 13:53:20,736 [wrapper] cleanup supervisor_pilot 1288814 1094938
[2025-10-13 16:04:47] 2025-10-13 13:53:20,739 [wrapper] Test setup, not cleaning
[2025-10-13 16:04:47] 2025-10-13 13:53:20,742 [wrapper] apfmon messages muted
[2025-10-13 16:04:47] 2025-10-13 13:53:20,745 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:04:47] 2025-10-13 13:53:20,748 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:04:47]  *** Error codes and diagnostics ***
[2025-10-13 16:04:47]     "exeErrorCode": 0,
[2025-10-13 16:04:47]     "exeErrorDiag": "",
[2025-10-13 16:04:47]     "pilotErrorCode": 0,
[2025-10-13 16:04:47]     "pilotErrorDiag": "",
[2025-10-13 16:04:47]  *** Listing of results directory ***
[2025-10-13 16:04:47] total 417284
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:19 queuedata.json
[2025-10-13 16:04:47] -rwx------ 1 boinc boinc     36292 Oct 12 08:21 runpilot2-wrapper.sh
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:04:47] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:59 run_atlas
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:59 job.xml
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc      6636 Oct 13 12:59 init_data.xml
[2025-10-13 16:04:47] -rw-r--r-- 2 boinc boinc 221415899 Oct 13 12:59 EVNT.46676267._004346.pool.root.1
[2025-10-13 16:04:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:59 start_atlas.sh
[2025-10-13 16:04:47] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:59 shared
[2025-10-13 16:04:47] -rw-r--r-- 2 boinc boinc    569684 Oct 13 12:59 input.tar.gz
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:59 boinc_lockfile
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:59 pandaJob.out
[2025-10-13 16:04:47] -rw------- 1 boinc boinc    972497 Oct 13 12:59 agis_schedconf.cvmfs.json
[2025-10-13 16:04:47] -rw------- 1 boinc boinc   1560580 Oct 13 12:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:04:47] drwx------ 5 boinc boinc      4096 Oct 13 12:59 pilot3
[2025-10-13 16:04:47] -rw------- 1 boinc boinc 198315577 Oct 13 15:51 HITS.46676269._072431.pool.root.1
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc       528 Oct 13 15:51 boinc_task_state.xml
[2025-10-13 16:04:47] -rw------- 1 boinc boinc        95 Oct 13 15:52 pilot_heartbeat.json
[2025-10-13 16:04:47] -rw------- 1 boinc boinc      1033 Oct 13 15:52 memory_monitor_summary.json
[2025-10-13 16:04:47] -rw------- 1 boinc boinc    351525 Oct 13 15:52 log.46676269._072431.job.log.tgz.1
[2025-10-13 16:04:47] -rw------- 1 boinc boinc      7830 Oct 13 15:52 heartbeat.json
[2025-10-13 16:04:47] -rw------- 1 boinc boinc      4905 Oct 13 15:53 pilotlog.txt
[2025-10-13 16:04:47] -rw------- 1 boinc boinc   1479596 Oct 13 15:53 log.46676269._072431.job.log.1
[2025-10-13 16:04:47] -rw------- 1 boinc boinc       357 Oct 13 15:53 output.list
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:53 runtime_log
[2025-10-13 16:04:47] -rw------- 1 boinc boinc   1853440 Oct 13 15:53 result.tar.gz
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc      9070 Oct 13 15:53 runtime_log.err
[2025-10-13 16:04:47] -rw------- 1 boinc boinc       664 Oct 13 15:53 LHNKDmAd4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuoiNDmRC9w6m.diag
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:04 wrapper_checkpoint.txt
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:04 boinc_mmap_file
[2025-10-13 16:04:47] -rw-r--r-- 1 boinc boinc     20738 Oct 13 16:04 stderr.txt
[2025-10-13 16:04:47] HITS file was successfully produced:
[2025-10-13 16:04:47] -rw------- 1 boinc boinc 198315577 Oct 13 15:51 shared/HITS.pool.root.1
[2025-10-13 16:04:47]  *** Contents of shared directory: ***
[2025-10-13 16:04:47] total 412292
[2025-10-13 16:04:47] -rw-r--r-- 2 boinc boinc 221415899 Oct 13 12:59 ATLAS.root_0
[2025-10-13 16:04:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:59 start_atlas.sh
[2025-10-13 16:04:47] -rw-r--r-- 2 boinc boinc    569684 Oct 13 12:59 input.tar.gz
[2025-10-13 16:04:47] -rw------- 1 boinc boinc 198315577 Oct 13 15:51 HITS.pool.root.1
[2025-10-13 16:04:47] -rw------- 1 boinc boinc   1853440 Oct 13 15:53 result.tar.gz
16:04:49 (1088971): run_atlas exited; CPU time 40180.351523
16:04:49 (1088971): called boinc_finish(0)

</stderr_txt>
]]>

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