Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:02:05 (446682): wrapper (7.7.26015): starting
05:02:05 (446682): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 05:02:05] Arguments: --nthreads 12
[2025-10-12 05:02:05] Threads: 12
[2025-10-12 05:02:05] Checking for CVMFS
[2025-10-12 05:02:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:02:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:02:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:02:05] 2.13.2.0 14624 315 50700 151613 0 188 2459997 4096000 402 130560 0 1044131 99.997 12172 1295 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 05:02:05] CVMFS is ok
[2025-10-12 05:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:02:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 05:02:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 05:02:05] Further information can be found at the LHC@home message board.
[2025-10-12 05:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:02:05] Checking for apptainer binary...
[2025-10-12 05:02:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:02:05] Running /usr/bin/apptainer --version
[2025-10-12 05:02:05] apptainer version 1.4.3
[2025-10-12 05:02:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:02:05] zhiwei-Z790-Riptide-WiFi
[2025-10-12 05:02:05] apptainer works
[2025-10-12 05:02:05] Set ATHENA_PROC_NUMBER=12
[2025-10-12 05:02:05] Set ATHENA_CORE_NUMBER=12
[2025-10-12 05:02:05] Starting ATLAS job with PandaID=6837632254
[2025-10-12 05:02:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:29:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:29:17] 2025-10-12 09:28:20,530 | INFO     | summary of transferred files:
[2025-10-12 05:29:17] 2025-10-12 09:28:20,530 | INFO     |  -- lfn=log.46676269._039935.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 05:29:17] 2025-10-12 09:28:20,530 | INFO     | stage-out finished correctly
[2025-10-12 05:29:17] 2025-10-12 09:28:21,193 | INFO     | time since job start (1571s) is within the limit (172800.0s)
[2025-10-12 05:29:17] 2025-10-12 09:28:23,198 | INFO     | time since job start (1573s) is within the limit (172800.0s)
[2025-10-12 05:29:17] 2025-10-12 09:28:23,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 05:29:17] 2025-10-12 09:28:25,204 | INFO     | time since job start (1575s) is within the limit (172800.0s)
[2025-10-12 05:29:17] 2025-10-12 09:28:26,156 | INFO     | job 6837632254 has state=finished
[2025-10-12 05:29:17] 2025-10-12 09:28:26,156 | INFO     | preparing for final server update for job 6837632254 in state='finished'
[2025-10-12 05:29:17] 2025-10-12 09:28:26,157 | INFO     | this job has now completed (state=finished)
[2025-10-12 05:29:17] 2025-10-12 09:28:26,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 05:29:17] 2025-10-12 09:28:26,157 | INFO     | log transfer has been attempted: DONE
[2025-10-12 05:29:17] 2025-10-12 09:28:26,157 | INFO     | job 6837632254 has finished - writing final server update
[2025-10-12 05:29:17] 2025-10-12 09:28:26,157 | INFO     | total number of processed events: 400 (read)
[2025-10-12 05:29:17] 2025-10-12 09:28:26,159 | INFO     | executing command: lscpu
[2025-10-12 05:29:17] 2025-10-12 09:28:26,173 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 05:29:17] 2025-10-12 09:28:26,398 | WARNING  | process 459303 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 05:29:17] 2025-10-12 09:28:26,398 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837632254/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:29:17] 2025-10-12 09:28:26,398 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837632254/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:29:17] 2025-10-12 09:28:26,398 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 05:29:17] 2025-10-12 09:28:26,399 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 05:29:17] 2025-10-12 09:28:26,399 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4280307 B
[2025-10-12 05:29:17] 2025-10-12 09:28:26,399 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15789 B
[2025-10-12 05:29:17] 2025-10-12 09:28:26,399 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-12 05:29:17] 2025-10-12 09:28:27,209 | INFO     | time since job start (1577s) is within the limit (172800.0s)
[2025-10-12 05:29:17] 2025-10-12 09:28:29,214 | INFO     | time since job start (1579s) is within the limit (172800.0s)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,325 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 05:29:17] 2025-10-12 09:28:30,330 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 2822.7842499999997
[2025-10-12 05:29:17] 2025-10-12 09:28:30,332 | INFO     | sufficient remaining disk space (1819342274560 B)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,332 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,333 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837632254/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,333 | INFO     | extracted standard info from prmon json
[2025-10-12 05:29:17] 2025-10-12 09:28:30,333 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:29:17] 2025-10-12 09:28:30,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:29:17] 2025-10-12 09:28:30,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:29:17] 2025-10-12 09:28:30,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:29:17] 2025-10-12 09:28:30,334 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-6837632254: 4557691 B (within 2537553920 B limit)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,334 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | sum of square deviations: 2120970.0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-6837632254/HITS.46676269._039935.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | sum of deviations: -496753866.0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | total size of present files: 0 B (workdir size: 4557691 B)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | mean x: 1760260599.0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-6837632254/HITS.46676269._039935.pool.root.1 since it does not exist
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | mean y: 2823059.6315789474
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | -- intersect: 412274688159.433
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | intersect: 412274688159.433
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | chi2: 0.007121034103620376
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | -- intersect: 412274688159.433
[2025-10-12 05:29:17] 2025-10-12 09:28:30,335 | INFO     | current memory leak: -234.21 B/s (using 19 data points, chi2=0.01)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | could have reported an average CPU frequency of 2763 MHz (4 samples)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | ..............................
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . Timing measurements:
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . get job = 0 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . initial setup = 1 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . payload setup = 1 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . stage-in = 0 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . payload execution = 1553 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . stage-out = 0 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | . log creation = 0 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,336 | INFO     | ..............................
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | 
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | job summary report
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | --------------------------------------------------
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | PanDA job id: 6837632254
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | task id: 46676269
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | errors: (none)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | pilot state: finished 
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | transexitcode: 0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | exeerrorcode: 0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | exeerrordiag: 
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | exitcode: 0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | exitmsg: OK
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | cpuconsumptiontime: 17338 s
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | nevents: 400
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | neventsw: 0
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | pid: 459303
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | pgrp: 459303
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | corecount: 12
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | event service: False
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | sizes: {0: 2348857, 1: 2349119, 10: 2349147, 1558: 2382887, 1561: 2382887, 1568: 2383109}
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | --------------------------------------------------
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | 
[2025-10-12 05:29:17] 2025-10-12 09:28:30,419 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-12 05:29:17] 2025-10-12 09:28:30,427 | INFO     | number of running child processes to parent process 459303: 1
[2025-10-12 05:29:17] 2025-10-12 09:28:30,427 | INFO     | maximum number of monitored processes: 6
[2025-10-12 05:29:17] 2025-10-12 09:28:30,427 | INFO     | aborting job monitoring since job object (job id=6837632254) has expired
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | job 6837632254 has completed (purged errors)
[2025-10-12 05:29:17] 2025-10-12 09:28:30,433 | INFO     | overall cleanup function is called
[2025-10-12 05:29:17] 2025-10-12 09:28:31,439 | INFO     | --- collectZombieJob: --- 10, [459303]
[2025-10-12 05:29:17] 2025-10-12 09:28:31,439 | INFO     | zombie collector waiting for pid 459303
[2025-10-12 05:29:17] 2025-10-12 09:28:31,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:29:17] 2025-10-12 09:28:31,440 | INFO     | collected zombie processes
[2025-10-12 05:29:17] 2025-10-12 09:28:31,440 | INFO     | will attempt to kill all subprocesses of pid=459303
[2025-10-12 05:29:17] 2025-10-12 09:28:31,502 | INFO     | process IDs to be killed: [459303] (in reverse order)
[2025-10-12 05:29:17] 2025-10-12 09:28:31,527 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:29:17] 2025-10-12 09:28:31,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:29:17] 2025-10-12 09:28:31,529 | INFO     | did not find any defunct processes belonging to 459303
[2025-10-12 05:29:17] 2025-10-12 09:28:31,531 | INFO     | did not find any defunct processes belonging to 459303
[2025-10-12 05:29:17] 2025-10-12 09:28:31,531 | INFO     | ready for new job
[2025-10-12 05:29:17] 2025-10-12 09:28:31,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:29:17] 2025-10-12 09:28:31,532 | INFO     | ***************************************
[2025-10-12 05:29:17] 2025-10-12 09:28:31,532 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:29:17] 2025-10-12 09:28:31,532 | INFO     | ***************************************
[2025-10-12 05:29:17] 2025-10-12 09:28:31,532 | INFO     | 
[2025-10-12 05:29:17] 2025-10-12 09:28:31,533 | INFO     | architecture information:
[2025-10-12 05:29:17] 2025-10-12 09:28:31,533 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:29:17] 2025-10-12 09:28:31,539 | INFO     | cat /etc/os-release:
[2025-10-12 05:29:17] NAME="CentOS Linux"
[2025-10-12 05:29:17] VERSION="7 (Core)"
[2025-10-12 05:29:17] ID="centos"
[2025-10-12 05:29:17] ID_LIKE="rhel fedora"
[2025-10-12 05:29:17] VERSION_ID="7"
[2025-10-12 05:29:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:29:17] ANSI_COLOR="0;31"
[2025-10-12 05:29:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:29:17] HOME_URL="https://www.centos.org/"
[2025-10-12 05:29:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:29:17] 
[2025-10-12 05:29:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:29:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:29:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:29:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:29:17] 
[2025-10-12 05:29:17] 2025-10-12 09:28:31,539 | INFO     | ***************************************
[2025-10-12 05:29:17] 2025-10-12 09:28:32,042 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-12 05:29:17] 2025-10-12 09:28:32,050 | INFO     | sufficient remaining disk space (1819346468864 B)
[2025-10-12 05:29:17] 2025-10-12 09:28:32,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:29:17] 2025-10-12 09:28:32,050 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:29:17] 2025-10-12 09:28:32,050 | INFO     | update_server=False
[2025-10-12 05:29:17] 2025-10-12 09:28:32,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:29:17] 2025-10-12 09:28:32,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:29:17] 2025-10-12 09:28:32,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:29:17] 2025-10-12 09:28:32,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:29:17] 2025-10-12 09:28:32,051 | INFO     | aborting loop
[2025-10-12 05:29:17] 2025-10-12 09:28:32,870 | INFO     | all data control threads have been joined
[2025-10-12 05:29:17] 2025-10-12 09:28:32,950 | INFO     | all job control threads have been joined
[2025-10-12 05:29:17] 2025-10-12 09:28:33,056 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,056 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,056 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,115 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,127 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,202 | INFO     | all payload control threads have been joined
[2025-10-12 05:29:17] 2025-10-12 09:28:33,742 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,875 | INFO     | [data] control thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:33,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:29:17] 2025-10-12 09:28:33,955 | INFO     | [job] control thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:34,053 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:34,207 | INFO     | [payload] control thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:34,308 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:34,378 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:34,411 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:34,517 | INFO     | [job] validate thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:37,917 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:28:43,030 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:29:17] 2025-10-12 09:28:44,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:29:17] 2025-10-12 09:29:02,338 | INFO     | PID=450531 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 05:29:17] 2025-10-12 09:29:02,338 | INFO     | .. there are 2 such processes running
[2025-10-12 05:29:17] 2025-10-12 09:29:02,338 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:29:17] 2025-10-12 09:29:02,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:29:17] 2025-10-12 09:29:02,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:29:17] 2025-10-12 09:29:12,201 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:29:17] 2025-10-12 09:29:12,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125416761960256)>', '<ExcThread(monitor, started 125416115263232)>']
[2025-10-12 05:29:17] 2025-10-12 09:29:13,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:29:17] 2025-10-12 09:29:13,393 | INFO     | [monitor] control thread has ended
[2025-10-12 05:29:17] 2025-10-12 09:29:17,536 | INFO     | all workflow threads have been joined
[2025-10-12 05:29:17] 2025-10-12 09:29:17,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:29:17] 2025-10-12 09:29:17,536 | INFO     | traces error code: 0
[2025-10-12 05:29:17] 2025-10-12 09:29:17,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:29:17] 2025-10-12 09:29:17,569 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:29:17] 2025-10-12 09:29:17,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:29:17] 2025-10-12 09:29:17,573 [wrapper] pilotpid: 450531
[2025-10-12 05:29:17] 2025-10-12 09:29:17,575 [wrapper] Pilot exit status: 0
[2025-10-12 05:29:17] 2025-10-12 09:29:17,578 [wrapper] pandaids: 6837632254
[2025-10-12 05:29:17] 2025-10-12 09:29:17,591 [wrapper] cleanup supervisor_pilot  484215 450532
[2025-10-12 05:29:17] 2025-10-12 09:29:17,592 [wrapper] Test setup, not cleaning
[2025-10-12 05:29:17] 2025-10-12 09:29:17,593 [wrapper] apfmon messages muted
[2025-10-12 05:29:17] 2025-10-12 09:29:17,594 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:29:17] 2025-10-12 09:29:17,594 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:29:17]  *** Error codes and diagnostics ***
[2025-10-12 05:29:17]     "exeErrorCode": 0,
[2025-10-12 05:29:17]     "exeErrorDiag": "",
[2025-10-12 05:29:17]     "pilotErrorCode": 0,
[2025-10-12 05:29:17]     "pilotErrorDiag": "",
[2025-10-12 05:29:17]  *** Listing of results directory ***
[2025-10-12 05:29:17] total 419020
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc    557409 Oct 10 10:05 pilot3.tar.gz
[2025-10-12 05:29:17] -rwx------ 1 boinc boinc     36292 Oct 10 10:24 runpilot2-wrapper.sh
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc      5112 Oct 10 10:24 queuedata.json
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc       100 Oct 12 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:29:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 05:02 run_atlas
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc       105 Oct 12 05:02 job.xml
[2025-10-12 05:29:17] -rw-r--r-- 2 boinc boinc 219289528 Oct 12 05:02 EVNT.46676267._001620.pool.root.1
[2025-10-12 05:29:17] -rw-r--r-- 2 boinc boinc    569676 Oct 12 05:02 input.tar.gz
[2025-10-12 05:29:17] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:02 start_atlas.sh
[2025-10-12 05:29:17] drwxrwx--x 2 boinc boinc      4096 Oct 12 05:02 shared
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:02 boinc_setup_complete
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc     11824 Oct 12 05:02 init_data.xml
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:02 boinc_lockfile
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc      2550 Oct 12 05:02 pandaJob.out
[2025-10-12 05:29:17] -rw------- 1 boinc boinc    975520 Oct 12 05:02 agis_schedconf.cvmfs.json
[2025-10-12 05:29:17] -rw------- 1 boinc boinc   1560580 Oct 12 05:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:29:17] drwx------ 5 boinc boinc      4096 Oct 12 05:02 pilot3
[2025-10-12 05:29:17] -rw------- 1 boinc boinc 204646766 Oct 12 05:27 HITS.46676269._039935.pool.root.1
[2025-10-12 05:29:17] -rw------- 1 boinc boinc      1014 Oct 12 05:28 memory_monitor_summary.json
[2025-10-12 05:29:17] -rw------- 1 boinc boinc        95 Oct 12 05:28 pilot_heartbeat.json
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc       529 Oct 12 05:28 boinc_task_state.xml
[2025-10-12 05:29:17] -rw------- 1 boinc boinc    343568 Oct 12 05:28 log.46676269._039935.job.log.tgz.1
[2025-10-12 05:29:17] -rw------- 1 boinc boinc      7771 Oct 12 05:28 heartbeat.json
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc        27 Oct 12 05:28 wrapper_checkpoint.txt
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc      8192 Oct 12 05:28 boinc_mmap_file
[2025-10-12 05:29:17] -rw------- 1 boinc boinc      4896 Oct 12 05:29 pilotlog.txt
[2025-10-12 05:29:17] -rw------- 1 boinc boinc    272397 Oct 12 05:29 log.46676269._039935.job.log.1
[2025-10-12 05:29:17] -rw------- 1 boinc boinc       357 Oct 12 05:29 output.list
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:29 runtime_log
[2025-10-12 05:29:17] -rw------- 1 boinc boinc    634880 Oct 12 05:29 result.tar.gz
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc      8741 Oct 12 05:29 runtime_log.err
[2025-10-12 05:29:17] -rw------- 1 boinc boinc       657 Oct 12 05:29 2TbMDmzDTR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0ZdNDmhI64No.diag
[2025-10-12 05:29:17] -rw-r--r-- 1 boinc boinc     22370 Oct 12 05:29 stderr.txt
[2025-10-12 05:29:17] HITS file was successfully produced:
[2025-10-12 05:29:17] -rw------- 1 boinc boinc 204646766 Oct 12 05:27 shared/HITS.pool.root.1
[2025-10-12 05:29:17]  *** Contents of shared directory: ***
[2025-10-12 05:29:17] total 415208
[2025-10-12 05:29:17] -rw-r--r-- 2 boinc boinc 219289528 Oct 12 05:02 ATLAS.root_0
[2025-10-12 05:29:17] -rw-r--r-- 2 boinc boinc    569676 Oct 12 05:02 input.tar.gz
[2025-10-12 05:29:17] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:02 start_atlas.sh
[2025-10-12 05:29:17] -rw------- 1 boinc boinc 204646766 Oct 12 05:27 HITS.pool.root.1
[2025-10-12 05:29:17] -rw------- 1 boinc boinc    634880 Oct 12 05:29 result.tar.gz
05:29:19 (446682): run_atlas exited; CPU time 17344.945666
05:29:19 (446682): called boinc_finish(0)

</stderr_txt>
]]>

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