Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:31:50 (3564822): wrapper (7.7.26015): starting
19:31:50 (3564822): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 19:31:50] Arguments: --nthreads 6
[2025-10-12 19:31:50] Threads: 6
[2025-10-12 19:31:50] Checking for CVMFS
[2025-10-12 19:31:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:31:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:31:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:31:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:31:51] 2.11.5.0 3651556 4182 72644 151617 2 57 38693582 52428801 1858 130560 0 12972099 99.997 141993 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 19:31:51] CVMFS is ok
[2025-10-12 19:31:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:31:51] Checking for apptainer binary...
[2025-10-12 19:31:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:31:51] Running /usr/bin/apptainer --version
[2025-10-12 19:31:51] apptainer version 1.3.5-1.el9
[2025-10-12 19:31:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:31:51] testio008
[2025-10-12 19:31:51] apptainer works
[2025-10-12 19:31:51] Set ATHENA_PROC_NUMBER=6
[2025-10-12 19:31:51] Set ATHENA_CORE_NUMBER=6
[2025-10-12 19:31:51] Starting ATLAS job with PandaID=6838990406
[2025-10-12 19:31:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:37:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:37:12]  scope=mc23_13p6TeV
[2025-10-12 20:37:12]  status=None
[2025-10-12 20:37:12]  status_code=0
[2025-10-12 20:37:12]  storage_token=
[2025-10-12 20:37:12]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6838990406/log.46676269._066059.job.log.tgz.1
[2025-10-12 20:37:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/59/log.46676269._066059.job.log.tgz.1
[2025-10-12 20:37:12]  workdir=None
[2025-10-12 20:37:12] ]
[2025-10-12 20:37:12] 2025-10-12 11:36:18,534 | INFO     | transferring file log.46676269._066059.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6838990406/log.46676269._066059.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 20:37:12] 2025-10-12 11:36:18,535 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6838990406/log.46676269._066059.job.log.tgz.1 /var/lib/boinc/slots/3/log.46676269._066059.job
[2025-10-12 20:37:12] 2025-10-12 11:36:18,542 | INFO     | adding to output.list: log.46676269._066059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/59/log.46676269._066059.job.log.tg
[2025-10-12 20:37:12] 2025-10-12 11:36:18,542 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:37:12] 2025-10-12 11:36:18,542 | INFO     | summary of transferred files:
[2025-10-12 20:37:12] 2025-10-12 11:36:18,542 | INFO     |  -- lfn=log.46676269._066059.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:37:12] 2025-10-12 11:36:18,543 | INFO     | stage-out finished correctly
[2025-10-12 20:37:12] 2025-10-12 11:36:19,355 | INFO     | monitor loop #295: job 0:6838990406 is in state 'finished'
[2025-10-12 20:37:12] 2025-10-12 11:36:19,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:37:12] 2025-10-12 11:36:19,551 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:37:12] 2025-10-12 11:36:19,927 | INFO     | time since job start (3859s) is within the limit (172800.0s)
[2025-10-12 20:37:12] 2025-10-12 11:36:21,858 | INFO     | monitor loop #296: job 0:6838990406 is in state 'finished'
[2025-10-12 20:37:12] 2025-10-12 11:36:21,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:37:12] 2025-10-12 11:36:21,932 | INFO     | time since job start (3861s) is within the limit (172800.0s)
[2025-10-12 20:37:12] 2025-10-12 11:36:22,459 | INFO     | job 6838990406 has state=finished
[2025-10-12 20:37:12] 2025-10-12 11:36:22,459 | INFO     | preparing for final server update for job 6838990406 in state='finished'
[2025-10-12 20:37:12] 2025-10-12 11:36:22,459 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:37:12] 2025-10-12 11:36:22,459 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:37:12] 2025-10-12 11:36:22,460 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:37:12] 2025-10-12 11:36:22,460 | INFO     | job 6838990406 has finished - writing final server update
[2025-10-12 20:37:12] 2025-10-12 11:36:22,460 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:37:12] 2025-10-12 11:36:22,461 | INFO     | executing command: lscpu
[2025-10-12 20:37:12] 2025-10-12 11:36:22,479 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:37:12] 2025-10-12 11:36:23,937 | INFO     | time since job start (3863s) is within the limit (172800.0s)
[2025-10-12 20:37:12] 2025-10-12 11:36:24,361 | INFO     | monitor loop #297: job 0:6838990406 is in state 'finished'
[2025-10-12 20:37:12] 2025-10-12 11:36:24,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,200 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:37:12] 2025-10-12 11:36:25,201 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4096.83705
[2025-10-12 20:37:12] 2025-10-12 11:36:25,203 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838990406/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,204 | INFO     | extracted standard info from prmon json
[2025-10-12 20:37:12] 2025-10-12 11:36:25,204 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:37:12] 2025-10-12 11:36:25,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:37:12] 2025-10-12 11:36:25,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:37:12] 2025-10-12 11:36:25,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | sum of square deviations: 54438230.0
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | sum of deviations: -7213655497.5
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | mean x: 1760267121.5
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | mean y: 2564496.2678571427
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | -- intersect: 233257036547.93036
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | intersect: 233257036547.93036
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | chi2: 0.037511286295307186
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | -- intersect: 233257036547.93036
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | current memory leak: -132.51 B/s (using 56 data points, chi2=0.04)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | could have reported an average CPU frequency of 3356 MHz (6 samples)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | ..............................
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | . Timing measurements:
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | . get job = 0 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | . initial setup = 5 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | . payload setup = 2 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | . stage-in = 0 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,205 | INFO     | . payload execution = 3837 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,206 | INFO     | . stage-out = 0 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,206 | INFO     | . log creation = 0 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,206 | INFO     | ..............................
[2025-10-12 20:37:12] 2025-10-12 11:36:25,249 | INFO     | 
[2025-10-12 20:37:12] 2025-10-12 11:36:25,249 | INFO     | job summary report
[2025-10-12 20:37:12] 2025-10-12 11:36:25,249 | INFO     | --------------------------------------------------
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | PanDA job id: 6838990406
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | task id: 46676269
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | errors: (none)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | pilot state: finished 
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | transexitcode: 0
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | exeerrorcode: 0
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | exeerrordiag: 
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | exitcode: 0
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | exitmsg: OK
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | cpuconsumptiontime: 20479 s
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | nevents: 400
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | neventsw: 0
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | pid: 3575314
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | pgrp: 3575314
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | corecount: 6
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | event service: False
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | sizes: {0: 2348680, 1: 2348879, 3: 2349141, 11: 2349169, 3843: 2375067, 3844: 2375066, 3845: 2384248, 3846: 2384304, 3852: 2384498}
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | --------------------------------------------------
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | 
[2025-10-12 20:37:12] 2025-10-12 11:36:25,250 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-12 20:37:12] 2025-10-12 11:36:25,258 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | job 6838990406 has completed (purged errors)
[2025-10-12 20:37:12] 2025-10-12 11:36:25,259 | INFO     | overall cleanup function is called
[2025-10-12 20:37:12] 2025-10-12 11:36:26,264 | INFO     | --- collectZombieJob: --- 10, [3575314]
[2025-10-12 20:37:12] 2025-10-12 11:36:26,265 | INFO     | zombie collector waiting for pid 3575314
[2025-10-12 20:37:12] 2025-10-12 11:36:26,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:37:12] 2025-10-12 11:36:26,265 | INFO     | collected zombie processes
[2025-10-12 20:37:12] 2025-10-12 11:36:26,265 | INFO     | will attempt to kill all subprocesses of pid=3575314
[2025-10-12 20:37:12] 2025-10-12 11:36:26,300 | INFO     | process IDs to be killed: [3575314] (in reverse order)
[2025-10-12 20:37:12] 2025-10-12 11:36:26,320 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:37:12] 2025-10-12 11:36:26,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:37:12] 2025-10-12 11:36:26,321 | INFO     | did not find any defunct processes belonging to 3575314
[2025-10-12 20:37:12] 2025-10-12 11:36:26,323 | INFO     | did not find any defunct processes belonging to 3575314
[2025-10-12 20:37:12] 2025-10-12 11:36:26,323 | INFO     | ready for new job
[2025-10-12 20:37:12] 2025-10-12 11:36:26,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:37:12] 2025-10-12 11:36:26,324 | INFO     | ***************************************
[2025-10-12 20:37:12] 2025-10-12 11:36:26,324 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:37:12] 2025-10-12 11:36:26,324 | INFO     | ***************************************
[2025-10-12 20:37:12] 2025-10-12 11:36:26,324 | INFO     | 
[2025-10-12 20:37:12] 2025-10-12 11:36:26,324 | INFO     | architecture information:
[2025-10-12 20:37:12] 2025-10-12 11:36:26,325 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:37:12] 2025-10-12 11:36:26,331 | INFO     | cat /etc/os-release:
[2025-10-12 20:37:12] NAME="CentOS Linux"
[2025-10-12 20:37:12] VERSION="7 (Core)"
[2025-10-12 20:37:12] ID="centos"
[2025-10-12 20:37:12] ID_LIKE="rhel fedora"
[2025-10-12 20:37:12] VERSION_ID="7"
[2025-10-12 20:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:37:12] ANSI_COLOR="0;31"
[2025-10-12 20:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:37:12] HOME_URL="https://www.centos.org/"
[2025-10-12 20:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:37:12] 
[2025-10-12 20:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:37:12] 
[2025-10-12 20:37:12] 2025-10-12 11:36:26,331 | INFO     | ***************************************
[2025-10-12 20:37:12] 2025-10-12 11:36:26,833 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | INFO     | sufficient remaining disk space (280197332992 B)
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | INFO     | update_server=False
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:37:12] 2025-10-12 11:36:26,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:37:12] 2025-10-12 11:36:26,864 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:37:12] 2025-10-12 11:36:26,865 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:37:12] 2025-10-12 11:36:26,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:37:12] 2025-10-12 11:36:26,865 | INFO     | will abort loop
[2025-10-12 20:37:12] 2025-10-12 11:36:27,053 | INFO     | all job control threads have been joined
[2025-10-12 20:37:12] 2025-10-12 11:36:27,561 | INFO     | all data control threads have been joined
[2025-10-12 20:37:12] 2025-10-12 11:36:27,752 | INFO     | all payload control threads have been joined
[2025-10-12 20:37:12] 2025-10-12 11:36:27,846 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:27,846 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:27,870 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,058 | INFO     | [job] control thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,142 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,373 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,566 | INFO     | [data] control thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,652 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,653 | INFO     | [job] validate thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,757 | INFO     | [payload] control thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,846 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:28,957 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:29,175 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:29,189 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:30,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:37:12] 2025-10-12 11:36:34,105 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:37:12] 2025-10-12 11:36:57,042 | INFO     | PID=3568604 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:37:12] 2025-10-12 11:36:57,042 | INFO     | .. there are 3 such processes running
[2025-10-12 20:37:12] 2025-10-12 11:36:57,042 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:37:12] 2025-10-12 11:36:57,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:37:12] 2025-10-12 11:36:57,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:37:12] 2025-10-12 11:37:06,476 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:37:12] 2025-10-12 11:37:07,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055729399616)>', '<ExcThread(monitor, started 140055226070784)>']
[2025-10-12 20:37:12] 2025-10-12 11:37:08,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:37:12] 2025-10-12 11:37:08,090 | INFO     | [monitor] control thread has ended
[2025-10-12 20:37:12] 2025-10-12 11:37:12,226 | INFO     | all workflow threads have been joined
[2025-10-12 20:37:12] 2025-10-12 11:37:12,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:37:12] 2025-10-12 11:37:12,227 | INFO     | traces error code: 0
[2025-10-12 20:37:12] 2025-10-12 11:37:12,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:37:12] 2025-10-12 11:37:12,282 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:37:12] 2025-10-12 11:37:12,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:37:12] 2025-10-12 11:37:12,284 [wrapper] pilotpid: 3568604
[2025-10-12 20:37:12] 2025-10-12 11:37:12,285 [wrapper] Pilot exit status: 0
[2025-10-12 20:37:12] 2025-10-12 11:37:12,288 [wrapper] pandaids: 6838990406
[2025-10-12 20:37:12] 2025-10-12 11:37:12,299 [wrapper] cleanup supervisor_pilot 3633416 3568605
[2025-10-12 20:37:12] 2025-10-12 11:37:12,300 [wrapper] Test setup, not cleaning
[2025-10-12 20:37:12] 2025-10-12 11:37:12,301 [wrapper] apfmon messages muted
[2025-10-12 20:37:12] 2025-10-12 11:37:12,302 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:37:12] 2025-10-12 11:37:12,303 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:37:12]  *** Error codes and diagnostics ***
[2025-10-12 20:37:12]     "exeErrorCode": 0,
[2025-10-12 20:37:12]     "exeErrorDiag": "",
[2025-10-12 20:37:12]     "pilotErrorCode": 0,
[2025-10-12 20:37:12]     "pilotErrorDiag": "",
[2025-10-12 20:37:12]  *** Listing of results directory ***
[2025-10-12 20:37:12] total 403748
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc    557409 Oct 12 07:04 pilot3.tar.gz
[2025-10-12 20:37:12] -rwx------. 1 boinc boinc     36292 Oct 12 07:18 runpilot2-wrapper.sh
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:18 queuedata.json
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc       100 Oct 12 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:37:12] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 19:31 run_atlas
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc       105 Oct 12 19:31 job.xml
[2025-10-12 20:37:12] -rw-r--r--. 2 boinc boinc 219331980 Oct 12 19:31 EVNT.46676267._002656.pool.root.1
[2025-10-12 20:37:12] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:31 start_atlas.sh
[2025-10-12 20:37:12] drwxrwx--x. 2 boinc boinc        68 Oct 12 19:31 shared
[2025-10-12 20:37:12] -rw-r--r--. 2 boinc boinc    569674 Oct 12 19:31 input.tar.gz
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc      9509 Oct 12 19:31 init_data.xml
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc         0 Oct 12 19:31 boinc_lockfile
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc      2547 Oct 12 19:31 pandaJob.out
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc    975520 Oct 12 19:31 agis_schedconf.cvmfs.json
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc   1560580 Oct 12 19:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:37:12] drwx------. 5 boinc boinc      4096 Oct 12 19:32 pilot3
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc 188490121 Oct 12 20:35 HITS.46676269._066059.pool.root.1
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc       529 Oct 12 20:36 boinc_task_state.xml
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc      1021 Oct 12 20:36 memory_monitor_summary.json
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc    268643 Oct 12 20:36 log.46676269._066059.job.log.tgz.1
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc        95 Oct 12 20:36 pilot_heartbeat.json
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc      7771 Oct 12 20:36 heartbeat.json
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc        27 Oct 12 20:37 wrapper_checkpoint.txt
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:37 boinc_mmap_file
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc      5010 Oct 12 20:37 pilotlog.txt
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc    590202 Oct 12 20:37 log.46676269._066059.job.log.1
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc       357 Oct 12 20:37 output.list
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:37 runtime_log
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc    880640 Oct 12 20:37 result.tar.gz
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc      8661 Oct 12 20:37 runtime_log.err
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc       642 Oct 12 20:37 fgJNDmx5wR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXhSMDmxcSGpm.diag
[2025-10-12 20:37:12] -rw-r--r--. 1 boinc boinc     21623 Oct 12 20:37 stderr.txt
[2025-10-12 20:37:12] HITS file was successfully produced:
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc 188490121 Oct 12 20:35 shared/HITS.pool.root.1
[2025-10-12 20:37:12]  *** Contents of shared directory: ***
[2025-10-12 20:37:12] total 399704
[2025-10-12 20:37:12] -rw-r--r--. 2 boinc boinc 219331980 Oct 12 19:31 ATLAS.root_0
[2025-10-12 20:37:12] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:31 start_atlas.sh
[2025-10-12 20:37:12] -rw-r--r--. 2 boinc boinc    569674 Oct 12 19:31 input.tar.gz
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc 188490121 Oct 12 20:35 HITS.pool.root.1
[2025-10-12 20:37:12] -rw-------. 1 boinc boinc    880640 Oct 12 20:37 result.tar.gz
20:37:13 (3564822): run_atlas exited; CPU time 20502.966887
20:37:13 (3564822): called boinc_finish(0)

</stderr_txt>
]]>

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