Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:39:15 (1436155): wrapper (7.7.26015): starting
04:39:15 (1436155): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:39:15] Arguments: --nthreads 8
[2025-10-12 04:39:15] Threads: 8
[2025-10-12 04:39:15] Checking for CVMFS
[2025-10-12 04:39:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:39:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:39:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:39:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:39:18] 2.13.2.0 1889558 129016 241808 151613 3 280 28175511 40960001 20288 16776704 0 191336350 99.704 168838562 30544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 04:39:18] CVMFS is ok
[2025-10-12 04:39:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:39:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:39:18] Further information can be found at the LHC@home message board.
[2025-10-12 04:39:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:39:18] Checking for apptainer binary...
[2025-10-12 04:39:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:39:18] Running /usr/bin/apptainer --version
[2025-10-12 04:39:18] apptainer version 1.4.3-1.el9
[2025-10-12 04:39:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:39:19] c6-5-7-1.aglt2.org
[2025-10-12 04:39:19] apptainer works
[2025-10-12 04:39:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:39:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:39:19] Starting ATLAS job with PandaID=6839163849
[2025-10-12 04:39:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:23:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:23:05] 2025-10-12 14:22:05,730 | INFO     | sum of square deviations: 11450323673.213228
[2025-10-12 10:23:05] 2025-10-12 14:22:05,737 | INFO     | sum of deviations: 12297645705.276276
[2025-10-12 10:23:05] 2025-10-12 14:22:05,737 | INFO     | mean x: 1760268703.4894896
[2025-10-12 10:23:05] 2025-10-12 14:22:05,737 | INFO     | mean y: 2142678.5075075077
[2025-10-12 10:23:05] 2025-10-12 14:22:05,737 | INFO     | -- intersect: -1888385613.9145582
[2025-10-12 10:23:05] 2025-10-12 14:22:05,737 | INFO     | intersect: -1888385613.9145582
[2025-10-12 10:23:05] 2025-10-12 14:22:05,738 | INFO     | chi2: 3.726648086512567
[2025-10-12 10:23:05] 2025-10-12 14:22:05,738 | INFO     | sum of square deviations: 10942267664.972557
[2025-10-12 10:23:05] 2025-10-12 14:22:05,744 | INFO     | sum of deviations: 53863333012.07012
[2025-10-12 10:23:05] 2025-10-12 14:22:05,744 | INFO     | mean x: 1760268550.9908535
[2025-10-12 10:23:05] 2025-10-12 14:22:05,745 | INFO     | mean y: 2155064.3567073173
[2025-10-12 10:23:05] 2025-10-12 14:22:05,745 | INFO     | -- intersect: -8662770164.643555
[2025-10-12 10:23:05] 2025-10-12 14:22:05,745 | INFO     | intersect: -8662770164.643555
[2025-10-12 10:23:05] 2025-10-12 14:22:05,745 | INFO     | chi2: 2.2286670260332357
[2025-10-12 10:23:05] 2025-10-12 14:22:05,745 | INFO     | current chi2=2.2286670260332357 (change=40.196472156864054 %)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,746 | INFO     | sum of square deviations: 10449447626.712051
[2025-10-12 10:23:05] 2025-10-12 14:22:05,747 | INFO     | sum of deviations: 54439347013.851395
[2025-10-12 10:23:05] 2025-10-12 14:22:05,748 | INFO     | mean x: 1760268398.489164
[2025-10-12 10:23:05] 2025-10-12 14:22:05,752 | INFO     | mean y: 2155236.6718266252
[2025-10-12 10:23:05] 2025-10-12 14:22:05,752 | INFO     | -- intersect: -9168459862.43658
[2025-10-12 10:23:05] 2025-10-12 14:22:05,752 | INFO     | intersect: -9168459862.43658
[2025-10-12 10:23:05] 2025-10-12 14:22:05,753 | INFO     | chi2: 2.2251196722954414
[2025-10-12 10:23:05] 2025-10-12 14:22:05,753 | INFO     | current chi2=2.2251196722954414 (change=0.15916930148637895 %)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,753 | INFO     | right removable region: 322
[2025-10-12 10:23:05] 2025-10-12 14:22:05,753 | INFO     | sum of square deviations: 10942228807.987745
[2025-10-12 10:23:05] 2025-10-12 14:22:05,755 | INFO     | sum of deviations: -49077108721.60365
[2025-10-12 10:23:05] 2025-10-12 14:22:05,755 | INFO     | mean x: 1760268855.9939024
[2025-10-12 10:23:05] 2025-10-12 14:22:05,755 | INFO     | mean y: 2161039.698170732
[2025-10-12 10:23:05] 2025-10-12 14:22:05,755 | INFO     | -- intersect: 7897161915.735635
[2025-10-12 10:23:05] 2025-10-12 14:22:05,756 | INFO     | intersect: 7897161915.735635
[2025-10-12 10:23:05] 2025-10-12 14:22:05,760 | INFO     | chi2: 1.807995789067295
[2025-10-12 10:23:05] 2025-10-12 14:22:05,760 | INFO     | current chi2=1.807995789067295 (change=51.48466538574521 %)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,761 | INFO     | sum of square deviations: 10449370156.749231
[2025-10-12 10:23:05] 2025-10-12 14:22:05,763 | INFO     | sum of deviations: -56474867509.48605
[2025-10-12 10:23:05] 2025-10-12 14:22:05,763 | INFO     | mean x: 1760269008.501548
[2025-10-12 10:23:05] 2025-10-12 14:22:05,763 | INFO     | mean y: 2163296.9721362228
[2025-10-12 10:23:05] 2025-10-12 14:22:05,763 | INFO     | -- intersect: 9515747134.55587
[2025-10-12 10:23:05] 2025-10-12 14:22:05,763 | INFO     | intersect: 9515747134.55587
[2025-10-12 10:23:05] 2025-10-12 14:22:05,768 | INFO     | chi2: 1.7005649852179001
[2025-10-12 10:23:05] 2025-10-12 14:22:05,768 | INFO     | current chi2=1.7005649852179001 (change=5.941983078667242 %)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,768 | INFO     | left removable region: 20
[2025-10-12 10:23:05] 2025-10-12 14:22:05,769 | INFO     | sum of square deviations: 8540891058.970176
[2025-10-12 10:23:05] 2025-10-12 14:22:05,770 | INFO     | sum of deviations: -2964708047.2317863
[2025-10-12 10:23:05] 2025-10-12 14:22:05,771 | INFO     | mean x: 1760268978.0099337
[2025-10-12 10:23:05] 2025-10-12 14:22:05,771 | INFO     | mean y: 2173013.4105960266
[2025-10-12 10:23:05] 2025-10-12 14:22:05,771 | INFO     | -- intersect: 613196332.6833007
[2025-10-12 10:23:05] 2025-10-12 14:22:05,771 | INFO     | intersect: 613196332.6833007
[2025-10-12 10:23:05] 2025-10-12 14:22:05,771 | INFO     | chi2: 0.13247346142458188
[2025-10-12 10:23:05] 2025-10-12 14:22:05,771 | INFO     | -- intersect: 613196332.6833007
[2025-10-12 10:23:05] 2025-10-12 14:22:05,772 | INFO     | current memory leak: -0.35 B/s (using 302 data points, chi2=0.13)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,776 | INFO     | could have reported an average CPU frequency of 2765 MHz (15 samples)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | ..............................
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . Timing measurements:
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . get job = 0 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . initial setup = 4 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . payload setup = 40 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . stage-in = 0 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . payload execution = 20326 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . stage-out = 6 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | . log creation = 1 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,777 | INFO     | ..............................
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | 
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | job summary report
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | --------------------------------------------------
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | PanDA job id: 6839163849
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | task id: 46676269
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | errors: (none)
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | pilot state: finished 
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | transexitcode: 0
[2025-10-12 10:23:05] 2025-10-12 14:22:05,988 | INFO     | exeerrorcode: 0
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | exeerrordiag: 
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | exitcode: 0
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | exitmsg: OK
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | cpuconsumptiontime: 43970 s
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | nevents: 400
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | neventsw: 0
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | pid: 1453428
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | pgrp: 1453428
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | corecount: 8
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | event service: False
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 13: 2348912, 24: 2348968, 35: 2348996, 36: 2349414, 46: 2349442, 20372: 2382615, 20373: 2382614, 20380: 2391668, 20381:
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | --------------------------------------------------
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | 
[2025-10-12 10:23:05] 2025-10-12 14:22:05,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 10:23:05] 2025-10-12 14:22:06,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,104 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | job 6839163849 has completed (purged errors)
[2025-10-12 10:23:05] 2025-10-12 14:22:06,105 | INFO     | overall cleanup function is called
[2025-10-12 10:23:05] 2025-10-12 14:22:07,159 | INFO     | --- collectZombieJob: --- 10, [1453428]
[2025-10-12 10:23:05] 2025-10-12 14:22:07,159 | INFO     | zombie collector waiting for pid 1453428
[2025-10-12 10:23:05] 2025-10-12 14:22:07,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:23:05] 2025-10-12 14:22:07,159 | INFO     | collected zombie processes
[2025-10-12 10:23:05] 2025-10-12 14:22:07,160 | INFO     | will attempt to kill all subprocesses of pid=1453428
[2025-10-12 10:23:05] 2025-10-12 14:22:08,158 | INFO     | PID=1442039 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:23:05] 2025-10-12 14:22:08,158 | INFO     | .. there are 30 such processes running
[2025-10-12 10:23:05] 2025-10-12 14:22:09,230 | INFO     | process IDs to be killed: [1453428] (in reverse order)
[2025-10-12 10:23:05] 2025-10-12 14:22:09,745 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:23:05] 2025-10-12 14:22:09,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:23:05] 2025-10-12 14:22:09,804 | INFO     | did not find any defunct processes belonging to 1453428
[2025-10-12 10:23:05] 2025-10-12 14:22:09,866 | INFO     | did not find any defunct processes belonging to 1453428
[2025-10-12 10:23:05] 2025-10-12 14:22:09,866 | INFO     | ready for new job
[2025-10-12 10:23:05] 2025-10-12 14:22:09,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:23:05] 2025-10-12 14:22:09,869 | INFO     | ***************************************
[2025-10-12 10:23:05] 2025-10-12 14:22:09,885 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:23:05] 2025-10-12 14:22:09,885 | INFO     | ***************************************
[2025-10-12 10:23:05] 2025-10-12 14:22:09,885 | INFO     | 
[2025-10-12 10:23:05] 2025-10-12 14:22:09,914 | INFO     | architecture information:
[2025-10-12 10:23:05] 2025-10-12 14:22:09,931 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:23:05] 2025-10-12 14:22:10,126 | INFO     | cat /etc/os-release:
[2025-10-12 10:23:05] NAME="CentOS Linux"
[2025-10-12 10:23:05] VERSION="7 (Core)"
[2025-10-12 10:23:05] ID="centos"
[2025-10-12 10:23:05] ID_LIKE="rhel fedora"
[2025-10-12 10:23:05] VERSION_ID="7"
[2025-10-12 10:23:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:23:05] ANSI_COLOR="0;31"
[2025-10-12 10:23:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:23:05] HOME_URL="https://www.centos.org/"
[2025-10-12 10:23:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:23:05] 
[2025-10-12 10:23:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:23:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:23:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:23:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:23:05] 
[2025-10-12 10:23:05] 2025-10-12 14:22:10,127 | INFO     | ***************************************
[2025-10-12 10:23:05] 2025-10-12 14:22:10,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 10:23:05] 2025-10-12 14:22:10,764 | INFO     | sufficient remaining disk space (74642882560 B)
[2025-10-12 10:23:05] 2025-10-12 14:22:10,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:23:05] 2025-10-12 14:22:10,764 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:23:05] 2025-10-12 14:22:10,765 | INFO     | update_server=False
[2025-10-12 10:23:05] 2025-10-12 14:22:10,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:23:05] 2025-10-12 14:22:10,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:23:05] 2025-10-12 14:22:10,869 | INFO     | all payload control threads have been joined
[2025-10-12 10:23:05] 2025-10-12 14:22:11,005 | INFO     | all data control threads have been joined
[2025-10-12 10:23:05] 2025-10-12 14:22:11,020 | INFO     | all job control threads have been joined
[2025-10-12 10:23:05] 2025-10-12 14:22:11,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:23:05] 2025-10-12 14:22:11,060 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 10:23:05] 2025-10-12 14:22:11,060 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 10:23:05] 2025-10-12 14:22:11,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:23:05] 2025-10-12 14:22:11,060 | INFO     | will abort loop
[2025-10-12 10:23:05] 2025-10-12 14:22:11,777 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:11,876 | INFO     | [job] validate thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:11,877 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:11,882 | INFO     | [payload] control thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:11,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,011 | INFO     | [data] control thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,025 | INFO     | [job] control thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,029 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:23:05] 2025-10-12 14:22:12,066 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,074 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,264 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,606 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,631 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:12,783 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:13,154 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:16,042 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:23:05] 2025-10-12 14:22:42,616 | INFO     | PID=1442039 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:23:05] 2025-10-12 14:22:42,621 | INFO     | .. there are 30 such processes running
[2025-10-12 10:23:05] 2025-10-12 14:22:42,621 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:23:05] 2025-10-12 14:22:42,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:23:05] 2025-10-12 14:22:42,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:23:05] 2025-10-12 14:22:56,300 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:23:05] 2025-10-12 14:22:58,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984825620288)>', '<ExcThread(monitor, started 139984543647488)>']
[2025-10-12 10:23:05] 2025-10-12 14:22:58,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:23:05] 2025-10-12 14:22:58,758 | INFO     | [monitor] control thread has ended
[2025-10-12 10:23:05] 2025-10-12 14:23:03,070 | INFO     | all workflow threads have been joined
[2025-10-12 10:23:05] 2025-10-12 14:23:03,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:23:05] 2025-10-12 14:23:03,070 | INFO     | traces error code: 0
[2025-10-12 10:23:05] 2025-10-12 14:23:03,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:23:05] 2025-10-12 14:23:04,400 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:23:05] 2025-10-12 14:23:04,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:23:05] 2025-10-12 14:23:04,416 [wrapper] pilotpid: 1442039
[2025-10-12 10:23:05] 2025-10-12 14:23:04,421 [wrapper] Pilot exit status: 0
[2025-10-12 10:23:05] 2025-10-12 14:23:04,632 [wrapper] pandaids: 6839163849
[2025-10-12 10:23:05] 2025-10-12 14:23:04,841 [wrapper] cleanup supervisor_pilot 2588857 1442040
[2025-10-12 10:23:05] 2025-10-12 14:23:04,866 [wrapper] Test setup, not cleaning
[2025-10-12 10:23:05] 2025-10-12 14:23:04,876 [wrapper] apfmon messages muted
[2025-10-12 10:23:05] 2025-10-12 14:23:04,891 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:23:05] 2025-10-12 14:23:04,959 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:23:05]  *** Error codes and diagnostics ***
[2025-10-12 10:23:05]     "exeErrorCode": 0,
[2025-10-12 10:23:05]     "exeErrorDiag": "",
[2025-10-12 10:23:05]     "pilotErrorCode": 0,
[2025-10-12 10:23:05]     "pilotErrorDiag": "",
[2025-10-12 10:23:05]  *** Listing of results directory ***
[2025-10-12 10:23:05] total 422696
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 10:23:05] -rwx------. 1 boincer umatlas     36292 Oct 11 20:27 runpilot2-wrapper.sh
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 20:27 queuedata.json
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas       100 Oct 12 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:23:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 04:39 run_atlas
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas       105 Oct 12 04:39 job.xml
[2025-10-12 10:23:05] -rw-r--r--. 2 boincer umatlas 218943155 Oct 12 04:39 EVNT.46676267._002759.pool.root.1
[2025-10-12 10:23:05] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 04:39 input.tar.gz
[2025-10-12 10:23:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:39 start_atlas.sh
[2025-10-12 10:23:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 04:39 shared
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas         0 Oct 12 04:39 boinc_lockfile
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 04:39 pandaJob.out
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas    975520 Oct 12 04:40 agis_schedconf.cvmfs.json
[2025-10-12 10:23:05] drwx------. 5 boincer umatlas      4096 Oct 12 04:40 pilot3
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas 203978474 Oct 12 10:19 HITS.46676269._067553.pool.root.1
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas       531 Oct 12 10:19 boinc_task_state.xml
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas      1042 Oct 12 10:21 memory_monitor_summary.json
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas    523215 Oct 12 10:21 log.46676269._067553.job.log.tgz.1
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas      7823 Oct 12 10:22 heartbeat.json
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas        95 Oct 12 10:22 pilot_heartbeat.json
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 10:22 init_data.xml
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:23 boinc_mmap_file
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:23 wrapper_checkpoint.txt
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas      5010 Oct 12 10:23 pilotlog.txt
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas   2484778 Oct 12 10:23 log.46676269._067553.job.log.1
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas       357 Oct 12 10:23 output.list
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:23 runtime_log
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas   3031040 Oct 12 10:23 result.tar.gz
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 10:23 runtime_log.err
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas       657 Oct 12 10:23 7klLDm66yR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmErSMDmM0ktOn.diag
[2025-10-12 10:23:05] -rw-r--r--. 1 boincer umatlas     21196 Oct 12 10:23 stderr.txt
[2025-10-12 10:23:05] HITS file was successfully produced:
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas 203978474 Oct 12 10:19 shared/HITS.pool.root.1
[2025-10-12 10:23:05]  *** Contents of shared directory: ***
[2025-10-12 10:23:05] total 416552
[2025-10-12 10:23:05] -rw-r--r--. 2 boincer umatlas 218943155 Oct 12 04:39 ATLAS.root_0
[2025-10-12 10:23:05] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 04:39 input.tar.gz
[2025-10-12 10:23:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:39 start_atlas.sh
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas 203978474 Oct 12 10:19 HITS.pool.root.1
[2025-10-12 10:23:05] -rw-------. 1 boincer umatlas   3031040 Oct 12 10:23 result.tar.gz
10:23:07 (1436155): run_atlas exited; CPU time 44631.086132
10:23:07 (1436155): called boinc_finish(0)

</stderr_txt>
]]>

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