Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:48:14 (2817225): wrapper (7.7.26015): starting
03:48:14 (2817225): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 03:48:14] Arguments: --nthreads 4
[2025-10-14 03:48:14] Threads: 4
[2025-10-14 03:48:14] Checking for CVMFS
[2025-10-14 03:48:14] No cvmfs_config command found, will try listing directly
[2025-10-14 03:48:14] CVMFS is ok
[2025-10-14 03:48:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 03:48:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 03:48:14] Further information can be found at the LHC@home message board.
[2025-10-14 03:48:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 03:48:14] Checking for apptainer binary...
[2025-10-14 03:48:14] which: no apptainer in ((null))
[2025-10-14 03:48:14] apptainer is not installed, using version from CVMFS
[2025-10-14 03:48:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 03:48:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-14 03:48:14] apptainer works
[2025-10-14 03:48:14] Set ATHENA_PROC_NUMBER=4
[2025-10-14 03:48:14] Set ATHENA_CORE_NUMBER=4
[2025-10-14 03:48:14] Starting ATLAS job with PandaID=6839319355
[2025-10-14 03:48:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 06:50:16]  *** The last 200 lines of the pilot log: ***
[2025-10-14 06:50:16] 2025-10-14 04:39:56,234 | INFO     | chi2: 1.2043145852112784
[2025-10-14 06:50:16] 2025-10-14 04:39:56,234 | INFO     | current chi2=1.2043145852112784 (change=-0.037747824585241174 %)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,234 | INFO     | right removable region: 162
[2025-10-14 06:50:16] 2025-10-14 04:39:56,234 | INFO     | sum of square deviations: 1342841922.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,238 | INFO     | sum of deviations: 6176545667.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,238 | INFO     | mean x: 1760411789.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,239 | INFO     | mean y: 2324034.411042945
[2025-10-14 06:50:16] 2025-10-14 04:39:56,239 | INFO     | -- intersect: -8094879090.800644
[2025-10-14 06:50:16] 2025-10-14 04:39:56,239 | INFO     | intersect: -8094879090.800644
[2025-10-14 06:50:16] 2025-10-14 04:39:56,239 | INFO     | chi2: 0.007932932585289341
[2025-10-14 06:50:16] 2025-10-14 04:39:56,239 | INFO     | current chi2=0.007932932585289341 (change=99.34104201740828 %)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,239 | INFO     | sum of square deviations: 1223016419.5
[2025-10-14 06:50:16] 2025-10-14 04:39:56,240 | INFO     | sum of deviations: 4222527848.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,240 | INFO     | mean x: 1760411941.5
[2025-10-14 06:50:16] 2025-10-14 04:39:56,240 | INFO     | mean y: 2326488.9367088606
[2025-10-14 06:50:16] 2025-10-14 04:39:56,241 | INFO     | -- intersect: -6075587370.939722
[2025-10-14 06:50:16] 2025-10-14 04:39:56,241 | INFO     | intersect: -6075587370.939722
[2025-10-14 06:50:16] 2025-10-14 04:39:56,241 | INFO     | chi2: 0.0006268816339332022
[2025-10-14 06:50:16] 2025-10-14 04:39:56,241 | INFO     | current chi2=0.0006268816339332022 (change=92.09773148588609 %)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,241 | INFO     | sum of square deviations: 1110539892.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,242 | INFO     | sum of deviations: 4136526022.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,242 | INFO     | mean x: 1760412094.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,242 | INFO     | mean y: 2326602.77124183
[2025-10-14 06:50:16] 2025-10-14 04:39:56,242 | INFO     | -- intersect: -6554835808.711505
[2025-10-14 06:50:16] 2025-10-14 04:39:56,243 | INFO     | intersect: -6554835808.711505
[2025-10-14 06:50:16] 2025-10-14 04:39:56,243 | INFO     | chi2: 0.0004359858341673738
[2025-10-14 06:50:16] 2025-10-14 04:39:56,243 | INFO     | current chi2=0.0004359858341673738 (change=30.4516497904243 %)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,243 | INFO     | sum of square deviations: 1005179777.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,244 | INFO     | sum of deviations: 3845484865.499999
[2025-10-14 06:50:16] 2025-10-14 04:39:56,244 | INFO     | mean x: 1760412246.5
[2025-10-14 06:50:16] 2025-10-14 04:39:56,244 | INFO     | mean y: 2327031.0472972975
[2025-10-14 06:50:16] 2025-10-14 04:39:56,244 | INFO     | -- intersect: -6732427095.38456
[2025-10-14 06:50:16] 2025-10-14 04:39:56,244 | INFO     | intersect: -6732427095.38456
[2025-10-14 06:50:16] 2025-10-14 04:39:56,245 | INFO     | chi2: 0.0002448793410463561
[2025-10-14 06:50:16] 2025-10-14 04:39:56,245 | INFO     | current chi2=0.0002448793410463561 (change=43.83318863696209 %)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,245 | INFO     | sum of square deviations: 906703512.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | sum of deviations: 3427444087.999998
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | mean x: 1760412399.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | mean y: 2327678.314685315
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | -- intersect: -6652234689.140271
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | intersect: -6652234689.140271
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | chi2: 0.00023910002597600388
[2025-10-14 06:50:16] 2025-10-14 04:39:56,246 | INFO     | current chi2=0.00023910002597600388 (change=2.3600664088924534 %)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,247 | INFO     | left removable region: 50
[2025-10-14 06:50:16] 2025-10-14 04:39:56,247 | INFO     | sum of square deviations: 435610028.0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,247 | INFO     | sum of deviations: 1512335362.9999998
[2025-10-14 06:50:16] 2025-10-14 04:39:56,247 | INFO     | mean x: 1760412978.5
[2025-10-14 06:50:16] 2025-10-14 04:39:56,248 | INFO     | mean y: 2330616.410714286
[2025-10-14 06:50:16] 2025-10-14 04:39:56,248 | INFO     | -- intersect: -6109408392.659362
[2025-10-14 06:50:16] 2025-10-14 04:39:56,248 | INFO     | intersect: -6109408392.659362
[2025-10-14 06:50:16] 2025-10-14 04:39:56,248 | INFO     | chi2: 0.00016976946764994354
[2025-10-14 06:50:16] 2025-10-14 04:39:56,248 | INFO     | -- intersect: -6109408392.659362
[2025-10-14 06:50:16] 2025-10-14 04:39:56,248 | INFO     | current memory leak: 3.47 B/s (using 112 data points, chi2=0.00)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | could have reported an average CPU frequency of 2719 MHz (9 samples)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | ..............................
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . Timing measurements:
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . get job = 0 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . initial setup = 1 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . payload setup = 9 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . stage-in = 0 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . payload execution = 10247 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,249 | INFO     | . stage-out = 0 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,250 | INFO     | . log creation = 0 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,250 | INFO     | ..............................
[2025-10-14 06:50:16] 2025-10-14 04:39:56,327 | INFO     | time since job start (10288s) is within the limit (172800.0s)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,346 | INFO     | 
[2025-10-14 06:50:16] 2025-10-14 04:39:56,346 | INFO     | job summary report
[2025-10-14 06:50:16] 2025-10-14 04:39:56,346 | INFO     | --------------------------------------------------
[2025-10-14 06:50:16] 2025-10-14 04:39:56,346 | INFO     | PanDA job id: 6839319355
[2025-10-14 06:50:16] 2025-10-14 04:39:56,346 | INFO     | task id: 46676269
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | errors: (none)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | pilot state: finished 
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | transexitcode: 0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | exeerrorcode: 0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | exeerrordiag: 
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | exitcode: 0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | exitmsg: OK
[2025-10-14 06:50:16] 2025-10-14 04:39:56,347 | INFO     | cpuconsumptiontime: 38758 s
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | nevents: 400
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | neventsw: 0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | pid: 2965585
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | pgrp: 2965585
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | corecount: 4
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | event service: False
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | sizes: {0: 2348691, 1: 2348890, 7: 2349152, 11: 2349180, 10260: 2378337, 10261: 2387540, 10262: 2387540, 10270: 2387798}
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | --------------------------------------------------
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | 
[2025-10-14 06:50:16] 2025-10-14 04:39:56,348 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-10-14 06:50:16] 2025-10-14 04:39:56,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,376 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,376 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 06:50:16] 2025-10-14 04:39:56,378 | INFO     | job 6839319355 has completed (purged errors)
[2025-10-14 06:50:16] 2025-10-14 04:39:56,378 | INFO     | overall cleanup function is called
[2025-10-14 06:50:16] 2025-10-14 04:39:57,383 | INFO     | --- collectZombieJob: --- 10, [2965585]
[2025-10-14 06:50:16] 2025-10-14 04:39:57,383 | INFO     | zombie collector waiting for pid 2965585
[2025-10-14 06:50:16] 2025-10-14 04:39:57,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 06:50:16] 2025-10-14 04:39:57,384 | INFO     | collected zombie processes
[2025-10-14 06:50:16] 2025-10-14 04:39:57,384 | INFO     | will attempt to kill all subprocesses of pid=2965585
[2025-10-14 06:50:16] 2025-10-14 04:39:58,101 | INFO     | process IDs to be killed: [2965585] (in reverse order)
[2025-10-14 06:50:16] 2025-10-14 04:39:58,349 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 06:50:16] 2025-10-14 04:39:58,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 06:50:16] 2025-10-14 04:39:58,382 | INFO     | did not find any defunct processes belonging to 2965585
[2025-10-14 06:50:16] 2025-10-14 04:39:58,413 | INFO     | did not find any defunct processes belonging to 2965585
[2025-10-14 06:50:16] 2025-10-14 04:39:58,413 | INFO     | ready for new job
[2025-10-14 06:50:16] 2025-10-14 04:39:58,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 06:50:16] 2025-10-14 04:39:58,415 | INFO     | ***************************************
[2025-10-14 06:50:16] 2025-10-14 04:39:58,416 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 06:50:16] 2025-10-14 04:39:58,416 | INFO     | ***************************************
[2025-10-14 06:50:16] 2025-10-14 04:39:58,416 | INFO     | 
[2025-10-14 06:50:16] 2025-10-14 04:39:58,424 | INFO     | architecture information:
[2025-10-14 06:50:16] 2025-10-14 04:39:58,425 | INFO     | executing command: cat /etc/os-release
[2025-10-14 06:50:16] 2025-10-14 04:39:58,451 | INFO     | cat /etc/os-release:
[2025-10-14 06:50:16] NAME="CentOS Linux"
[2025-10-14 06:50:16] VERSION="7 (Core)"
[2025-10-14 06:50:16] ID="centos"
[2025-10-14 06:50:16] ID_LIKE="rhel fedora"
[2025-10-14 06:50:16] VERSION_ID="7"
[2025-10-14 06:50:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 06:50:16] ANSI_COLOR="0;31"
[2025-10-14 06:50:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 06:50:16] HOME_URL="https://www.centos.org/"
[2025-10-14 06:50:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 06:50:16] 
[2025-10-14 06:50:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 06:50:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 06:50:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 06:50:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 06:50:16] 
[2025-10-14 06:50:16] 2025-10-14 04:39:58,452 | INFO     | ***************************************
[2025-10-14 06:50:16] 2025-10-14 04:39:58,954 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-10-14 06:50:16] 2025-10-14 04:39:58,976 | INFO     | sufficient remaining disk space (3356556787712 B)
[2025-10-14 06:50:16] 2025-10-14 04:39:58,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 06:50:16] 2025-10-14 04:39:58,976 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 06:50:16] 2025-10-14 04:39:58,976 | INFO     | update_server=False
[2025-10-14 06:50:16] 2025-10-14 04:39:58,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 06:50:16] 2025-10-14 04:39:58,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 06:50:16] 2025-10-14 04:39:58,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 06:50:16] 2025-10-14 04:39:59,360 | INFO     | all payload control threads have been joined
[2025-10-14 06:50:16] 2025-10-14 04:39:59,440 | INFO     | all data control threads have been joined
[2025-10-14 06:50:16] 2025-10-14 04:39:59,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:50:16] 2025-10-14 04:39:59,488 | INFO     | aborting loop
[2025-10-14 06:50:16] 2025-10-14 04:39:59,982 | INFO     | [job] retrieve thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,005 | INFO     | [payload] failed_post thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,244 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,247 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,275 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,347 | INFO     | all job control threads have been joined
[2025-10-14 06:50:16] 2025-10-14 04:40:00,366 | INFO     | [payload] control thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,445 | INFO     | [data] control thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,493 | INFO     | [job] job monitor thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,553 | INFO     | [data] copytool_in thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:00,983 | INFO     | [data] copytool_out thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:01,142 | INFO     | [payload] validate_post thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:01,351 | INFO     | [job] validate thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:01,354 | INFO     | [job] control thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:01,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:50:16] 2025-10-14 04:40:02,362 | INFO     | [job] queue monitor thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:02,984 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 06:50:16] 2025-10-14 04:40:30,308 | INFO     | PID=2852411 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 06:50:16] 2025-10-14 04:40:30,308 | INFO     | .. there are 8 such processes running
[2025-10-14 06:50:16] 2025-10-14 04:40:30,309 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 06:50:16] 2025-10-14 04:40:30,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 06:50:16] 2025-10-14 04:40:30,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 06:50:16] 2025-10-14 04:40:45,161 | INFO     | [monitor] cgroup control has ended
[2025-10-14 06:50:16] 2025-10-14 04:40:46,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22449300371264)>', '<ExcThread(monitor, started 22449064216320)>']
[2025-10-14 06:50:16] 2025-10-14 04:40:47,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 06:50:16] 2025-10-14 04:40:47,350 | INFO     | [monitor] control thread has ended
[2025-10-14 06:50:16] 2025-10-14 04:40:51,438 | INFO     | all workflow threads have been joined
[2025-10-14 06:50:16] 2025-10-14 04:40:51,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 06:50:16] 2025-10-14 04:40:51,438 | INFO     | traces error code: 0
[2025-10-14 06:50:16] 2025-10-14 04:40:51,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 06:50:16] 2025-10-14 04:40:51,587 [wrapper] ==== pilot stdout END ====
[2025-10-14 06:50:16] 2025-10-14 04:40:51,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 06:50:16] 2025-10-14 04:40:51,598 [wrapper] pilotpid: 2852411
[2025-10-14 06:50:16] 2025-10-14 04:40:51,601 [wrapper] Pilot exit status: 0
[2025-10-14 06:50:16] 2025-10-14 04:40:51,613 [wrapper] pandaids: 6839319355
[2025-10-14 06:50:16] 2025-10-14 04:40:51,784 [wrapper] cleanup supervisor_pilot 3312589 2852413
[2025-10-14 06:50:16] 2025-10-14 04:40:51,789 [wrapper] Test setup, not cleaning
[2025-10-14 06:50:16] 2025-10-14 04:40:51,792 [wrapper] apfmon messages muted
[2025-10-14 06:50:16] 2025-10-14 04:40:51,796 [wrapper] ==== wrapper stdout END ====
[2025-10-14 06:50:16] 2025-10-14 04:40:51,799 [wrapper] ==== wrapper stderr END ====
[2025-10-14 06:50:16]  *** Error codes and diagnostics ***
[2025-10-14 06:50:16]     "exeErrorCode": 0,
[2025-10-14 06:50:16]     "exeErrorDiag": "",
[2025-10-14 06:50:16]     "pilotErrorCode": 0,
[2025-10-14 06:50:16]     "pilotErrorDiag": "",
[2025-10-14 06:50:16]  *** Listing of results directory ***
[2025-10-14 06:50:16] total 417088
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:56 pilot3.tar.gz
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:17 queuedata.json
[2025-10-14 06:50:16] -rwx------ 1 boinc boinc     36292 Oct 12 05:17 runpilot2-wrapper.sh
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc       100 Oct 14 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 06:50:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 03:48 run_atlas
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc       105 Oct 14 03:48 job.xml
[2025-10-14 06:50:16] -rw-r--r-- 2 boinc boinc 220528641 Oct 14 03:48 EVNT.46676267._003217.pool.root.1
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc      6686 Oct 14 03:48 init_data.xml
[2025-10-14 06:50:16] -rw-r--r-- 2 boinc boinc    569683 Oct 14 03:48 input.tar.gz
[2025-10-14 06:50:16] -rw-r--r-- 2 boinc boinc     15120 Oct 14 03:48 start_atlas.sh
[2025-10-14 06:50:16] drwxrwx--x 2 boinc boinc      4096 Oct 14 03:48 shared
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc         0 Oct 14 03:48 boinc_lockfile
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc      2547 Oct 14 03:48 pandaJob.out
[2025-10-14 06:50:16] -rw------- 1 boinc boinc    972807 Oct 14 03:48 agis_schedconf.cvmfs.json
[2025-10-14 06:50:16] -rw------- 1 boinc boinc   1560580 Oct 14 03:48 agis_ddmendpoints.agis.ALL.json
[2025-10-14 06:50:16] drwx------ 5 boinc boinc      4096 Oct 14 03:48 pilot3
[2025-10-14 06:50:16] -rw------- 1 boinc boinc 199140505 Oct 14 06:39 HITS.46676269._070057.pool.root.1
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc       529 Oct 14 06:39 boinc_task_state.xml
[2025-10-14 06:50:16] -rw------- 1 boinc boinc      1023 Oct 14 06:39 memory_monitor_summary.json
[2025-10-14 06:50:16] -rw------- 1 boinc boinc    328069 Oct 14 06:39 log.46676269._070057.job.log.tgz.1
[2025-10-14 06:50:16] -rw------- 1 boinc boinc      7778 Oct 14 06:39 heartbeat.json
[2025-10-14 06:50:16] -rw------- 1 boinc boinc        95 Oct 14 06:40 pilot_heartbeat.json
[2025-10-14 06:50:16] -rw------- 1 boinc boinc      4834 Oct 14 06:40 pilotlog.txt
[2025-10-14 06:50:16] -rw------- 1 boinc boinc   1435351 Oct 14 06:40 log.46676269._070057.job.log.1
[2025-10-14 06:50:16] -rw------- 1 boinc boinc       357 Oct 14 06:40 output.list
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc       620 Oct 14 06:40 runtime_log
[2025-10-14 06:50:16] -rw------- 1 boinc boinc   1781760 Oct 14 06:40 result.tar.gz
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc      9070 Oct 14 06:40 runtime_log.err
[2025-10-14 06:50:16] -rw------- 1 boinc boinc       665 Oct 14 06:40 TuiLDmRl1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmc5SMDmqZU3Do.diag
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc        26 Oct 14 06:49 wrapper_checkpoint.txt
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc      8192 Oct 14 06:50 boinc_mmap_file
[2025-10-14 06:50:16] -rw-r--r-- 1 boinc boinc     20760 Oct 14 06:50 stderr.txt
[2025-10-14 06:50:16] HITS file was successfully produced:
[2025-10-14 06:50:16] -rw------- 1 boinc boinc 199140505 Oct 14 06:39 shared/HITS.pool.root.1
[2025-10-14 06:50:16]  *** Contents of shared directory: ***
[2025-10-14 06:50:16] total 412160
[2025-10-14 06:50:16] -rw-r--r-- 2 boinc boinc 220528641 Oct 14 03:48 ATLAS.root_0
[2025-10-14 06:50:16] -rw-r--r-- 2 boinc boinc    569683 Oct 14 03:48 input.tar.gz
[2025-10-14 06:50:16] -rw-r--r-- 2 boinc boinc     15120 Oct 14 03:48 start_atlas.sh
[2025-10-14 06:50:16] -rw------- 1 boinc boinc 199140505 Oct 14 06:39 HITS.pool.root.1
[2025-10-14 06:50:16] -rw------- 1 boinc boinc   1781760 Oct 14 06:40 result.tar.gz
06:50:17 (2817225): run_atlas exited; CPU time 39455.120811
06:50:17 (2817225): called boinc_finish(0)

</stderr_txt>
]]>

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