Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:52:01 (3535964): wrapper (7.7.26015): starting
18:52:01 (3535964): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 18:52:01] Arguments: --nthreads 6
[2025-10-12 18:52:01] Threads: 6
[2025-10-12 18:52:01] Checking for CVMFS
[2025-10-12 18:52:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:52:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:52:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:52:02] 2.11.5.0 3651556 4143 76260 151615 0 188 38675547 52428800 1858 130560 0 12881714 99.997 139402 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 18:52:02] CVMFS is ok
[2025-10-12 18:52:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:52:02] Checking for apptainer binary...
[2025-10-12 18:52:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:52:02] Running /usr/bin/apptainer --version
[2025-10-12 18:52:02] apptainer version 1.3.5-1.el9
[2025-10-12 18:52:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:52:02] testio008
[2025-10-12 18:52:02] apptainer works
[2025-10-12 18:52:02] Set ATHENA_PROC_NUMBER=6
[2025-10-12 18:52:02] Set ATHENA_CORE_NUMBER=6
[2025-10-12 18:52:02] Starting ATLAS job with PandaID=6839319331
[2025-10-12 18:52:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:57:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:57:24]  mtime=0
[2025-10-12 19:57:24]  protocol_id=None
[2025-10-12 19:57:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 19:57:24]  replicas=None
[2025-10-12 19:57:24]  scope=mc23_13p6TeV
[2025-10-12 19:57:24]  status=None
[2025-10-12 19:57:24]  status_code=0
[2025-10-12 19:57:24]  storage_token=
[2025-10-12 19:57:24]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6839319331/log.46676269._070033.job.log.tgz.1
[2025-10-12 19:57:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/51/log.46676269._070033.job.log.tgz.1
[2025-10-12 19:57:24]  workdir=None
[2025-10-12 19:57:24] ]
[2025-10-12 19:57:24] 2025-10-12 10:56:30,918 | INFO     | transferring file log.46676269._070033.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6839319331/log.46676269._070033.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 19:57:24] 2025-10-12 10:56:30,918 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6839319331/log.46676269._070033.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._070033.job
[2025-10-12 19:57:24] 2025-10-12 10:56:30,931 | INFO     | adding to output.list: log.46676269._070033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/51/log.46676269._070033.job.log.tg
[2025-10-12 19:57:24] 2025-10-12 10:56:30,932 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:57:24] 2025-10-12 10:56:30,932 | INFO     | summary of transferred files:
[2025-10-12 19:57:24] 2025-10-12 10:56:30,932 | INFO     |  -- lfn=log.46676269._070033.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:57:24] 2025-10-12 10:56:30,932 | INFO     | stage-out finished correctly
[2025-10-12 19:57:24] 2025-10-12 10:56:31,017 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:57:24] 2025-10-12 10:56:32,724 | INFO     | time since job start (3861s) is within the limit (172800.0s)
[2025-10-12 19:57:24] 2025-10-12 10:56:33,867 | INFO     | job 6839319331 has state=finished
[2025-10-12 19:57:24] 2025-10-12 10:56:33,867 | INFO     | preparing for final server update for job 6839319331 in state='finished'
[2025-10-12 19:57:24] 2025-10-12 10:56:33,868 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:57:24] 2025-10-12 10:56:33,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:57:24] 2025-10-12 10:56:33,868 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:57:24] 2025-10-12 10:56:33,868 | INFO     | job 6839319331 has finished - writing final server update
[2025-10-12 19:57:24] 2025-10-12 10:56:33,868 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:57:24] 2025-10-12 10:56:33,868 | INFO     | executing command: lscpu
[2025-10-12 19:57:24] 2025-10-12 10:56:33,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:57:24] 2025-10-12 10:56:34,729 | INFO     | time since job start (3863s) is within the limit (172800.0s)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,541 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:57:24] 2025-10-12 10:56:35,542 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4099.770050000001
[2025-10-12 19:57:24] 2025-10-12 10:56:35,544 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6839319331/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,545 | INFO     | extracted standard info from prmon json
[2025-10-12 19:57:24] 2025-10-12 10:56:35,545 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:57:24] 2025-10-12 10:56:35,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:57:24] 2025-10-12 10:56:35,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:57:24] 2025-10-12 10:56:35,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | sum of square deviations: 54438230.0
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | sum of deviations: -970710842.5
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | mean x: 1760264732.5
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | mean y: 2448396.375
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | -- intersect: 31390464897.060497
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | intersect: 31390464897.060497
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | chi2: 0.019559935636955943
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | -- intersect: 31390464897.060497
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | current memory leak: -17.83 B/s (using 56 data points, chi2=0.02)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | could have reported an average CPU frequency of 3727 MHz (6 samples)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | ..............................
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . Timing measurements:
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . get job = 0 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . initial setup = 6 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . payload setup = 2 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . stage-in = 0 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . payload execution = 3839 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,546 | INFO     | . stage-out = 0 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,547 | INFO     | . log creation = 0 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,547 | INFO     | ..............................
[2025-10-12 19:57:24] 2025-10-12 10:56:35,590 | INFO     | 
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | job summary report
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | --------------------------------------------------
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | PanDA job id: 6839319331
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | task id: 46676269
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | errors: (none)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | pilot state: finished 
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | transexitcode: 0
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | exeerrorcode: 0
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | exeerrordiag: 
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | exitcode: 0
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | exitmsg: OK
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | cpuconsumptiontime: 20697 s
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | nevents: 400
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | neventsw: 0
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | pid: 3546448
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | pgrp: 3546448
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | corecount: 6
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | event service: False
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | sizes: {0: 2348804, 2: 2349066, 11: 2349094, 3845: 2374909, 3846: 2383963, 3850: 2384101}
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | --------------------------------------------------
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | 
[2025-10-12 19:57:24] 2025-10-12 10:56:35,591 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | job 6839319331 has completed (purged errors)
[2025-10-12 19:57:24] 2025-10-12 10:56:35,600 | INFO     | overall cleanup function is called
[2025-10-12 19:57:24] 2025-10-12 10:56:36,461 | WARNING  | process 3546448 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 19:57:24] 2025-10-12 10:56:36,492 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:57:24] 2025-10-12 10:56:36,529 | INFO     | number of running child processes to parent process 3546448: 1
[2025-10-12 19:57:24] 2025-10-12 10:56:36,529 | INFO     | maximum number of monitored processes: 6
[2025-10-12 19:57:24] 2025-10-12 10:56:36,529 | INFO     | aborting job monitoring since job object (job id=6839319331) has expired
[2025-10-12 19:57:24] 2025-10-12 10:56:36,605 | INFO     | --- collectZombieJob: --- 10, [3546448]
[2025-10-12 19:57:24] 2025-10-12 10:56:36,605 | INFO     | zombie collector waiting for pid 3546448
[2025-10-12 19:57:24] 2025-10-12 10:56:36,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:57:24] 2025-10-12 10:56:36,606 | INFO     | collected zombie processes
[2025-10-12 19:57:24] 2025-10-12 10:56:36,606 | INFO     | will attempt to kill all subprocesses of pid=3546448
[2025-10-12 19:57:24] 2025-10-12 10:56:36,641 | INFO     | process IDs to be killed: [3546448] (in reverse order)
[2025-10-12 19:57:24] 2025-10-12 10:56:36,661 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:57:24] 2025-10-12 10:56:36,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:57:24] 2025-10-12 10:56:36,663 | INFO     | did not find any defunct processes belonging to 3546448
[2025-10-12 19:57:24] 2025-10-12 10:56:36,664 | INFO     | did not find any defunct processes belonging to 3546448
[2025-10-12 19:57:24] 2025-10-12 10:56:36,664 | INFO     | ready for new job
[2025-10-12 19:57:24] 2025-10-12 10:56:36,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:57:24] 2025-10-12 10:56:36,665 | INFO     | ***************************************
[2025-10-12 19:57:24] 2025-10-12 10:56:36,665 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:57:24] 2025-10-12 10:56:36,665 | INFO     | ***************************************
[2025-10-12 19:57:24] 2025-10-12 10:56:36,665 | INFO     | 
[2025-10-12 19:57:24] 2025-10-12 10:56:36,666 | INFO     | architecture information:
[2025-10-12 19:57:24] 2025-10-12 10:56:36,666 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:57:24] 2025-10-12 10:56:36,672 | INFO     | cat /etc/os-release:
[2025-10-12 19:57:24] NAME="CentOS Linux"
[2025-10-12 19:57:24] VERSION="7 (Core)"
[2025-10-12 19:57:24] ID="centos"
[2025-10-12 19:57:24] ID_LIKE="rhel fedora"
[2025-10-12 19:57:24] VERSION_ID="7"
[2025-10-12 19:57:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:57:24] ANSI_COLOR="0;31"
[2025-10-12 19:57:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:57:24] HOME_URL="https://www.centos.org/"
[2025-10-12 19:57:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:57:24] 
[2025-10-12 19:57:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:57:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:57:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:57:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:57:24] 
[2025-10-12 19:57:24] 2025-10-12 10:56:36,672 | INFO     | ***************************************
[2025-10-12 19:57:24] 2025-10-12 10:56:37,175 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 19:57:24] 2025-10-12 10:56:37,182 | INFO     | sufficient remaining disk space (280130224128 B)
[2025-10-12 19:57:24] 2025-10-12 10:56:37,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | INFO     | update_server=False
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:57:24] 2025-10-12 10:56:37,183 | INFO     | will abort loop
[2025-10-12 19:57:24] 2025-10-12 10:56:37,526 | INFO     | all data control threads have been joined
[2025-10-12 19:57:24] 2025-10-12 10:56:37,597 | INFO     | all job control threads have been joined
[2025-10-12 19:57:24] 2025-10-12 10:56:38,187 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,188 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,188 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,427 | INFO     | all payload control threads have been joined
[2025-10-12 19:57:24] 2025-10-12 10:56:38,531 | INFO     | [data] control thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,602 | INFO     | [job] control thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,721 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,777 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,834 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,906 | INFO     | [job] validate thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:38,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:39,187 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:39,323 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:39,367 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:39,432 | INFO     | [payload] control thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:39,751 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:56:41,188 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:57:24] 2025-10-12 10:57:07,836 | INFO     | PID=3539726 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:57:24] 2025-10-12 10:57:07,836 | INFO     | .. there are 3 such processes running
[2025-10-12 19:57:24] 2025-10-12 10:57:07,836 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:57:24] 2025-10-12 10:57:07,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:57:24] 2025-10-12 10:57:07,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:57:24] 2025-10-12 10:57:17,735 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:57:24] 2025-10-12 10:57:18,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191013394240)>', '<ExcThread(monitor, started 140190525933312)>']
[2025-10-12 19:57:24] 2025-10-12 10:57:19,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:57:24] 2025-10-12 10:57:19,896 | INFO     | [monitor] control thread has ended
[2025-10-12 19:57:24] 2025-10-12 10:57:23,951 | INFO     | all workflow threads have been joined
[2025-10-12 19:57:24] 2025-10-12 10:57:23,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:57:24] 2025-10-12 10:57:23,952 | INFO     | traces error code: 0
[2025-10-12 19:57:24] 2025-10-12 10:57:23,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:57:24] 2025-10-12 10:57:24,007 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:57:24] 2025-10-12 10:57:24,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:57:24] 2025-10-12 10:57:24,009 [wrapper] pilotpid: 3539726
[2025-10-12 19:57:24] 2025-10-12 10:57:24,010 [wrapper] Pilot exit status: 0
[2025-10-12 19:57:24] 2025-10-12 10:57:24,014 [wrapper] pandaids: 6839319331
[2025-10-12 19:57:24] 2025-10-12 10:57:24,025 [wrapper] cleanup supervisor_pilot 3604231 3539727
[2025-10-12 19:57:24] 2025-10-12 10:57:24,026 [wrapper] Test setup, not cleaning
[2025-10-12 19:57:24] 2025-10-12 10:57:24,027 [wrapper] apfmon messages muted
[2025-10-12 19:57:24] 2025-10-12 10:57:24,028 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:57:24] 2025-10-12 10:57:24,029 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:57:24]  *** Error codes and diagnostics ***
[2025-10-12 19:57:24]     "exeErrorCode": 0,
[2025-10-12 19:57:24]     "exeErrorDiag": "",
[2025-10-12 19:57:24]     "pilotErrorCode": 0,
[2025-10-12 19:57:24]     "pilotErrorDiag": "",
[2025-10-12 19:57:24]  *** Listing of results directory ***
[2025-10-12 19:57:24] total 407984
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:56 pilot3.tar.gz
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:17 queuedata.json
[2025-10-12 19:57:24] -rwx------. 1 boinc boinc     36292 Oct 12 12:18 runpilot2-wrapper.sh
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc       100 Oct 12 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:57:24] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 18:52 run_atlas
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc       105 Oct 12 18:52 job.xml
[2025-10-12 19:57:24] -rw-r--r--. 2 boinc boinc 220483396 Oct 12 18:52 EVNT.46676267._003216.pool.root.1
[2025-10-12 19:57:24] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:52 start_atlas.sh
[2025-10-12 19:57:24] drwxrwx--x. 2 boinc boinc        68 Oct 12 18:52 shared
[2025-10-12 19:57:24] -rw-r--r--. 2 boinc boinc    569673 Oct 12 18:52 input.tar.gz
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc      9509 Oct 12 18:52 init_data.xml
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc         0 Oct 12 18:52 boinc_lockfile
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc      2548 Oct 12 18:52 pandaJob.out
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc    975536 Oct 12 18:52 agis_schedconf.cvmfs.json
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc   1560580 Oct 12 18:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:57:24] drwx------. 5 boinc boinc      4096 Oct 12 18:52 pilot3
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc 191696975 Oct 12 19:56 HITS.46676269._070033.pool.root.1
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc       529 Oct 12 19:56 boinc_task_state.xml
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc      1021 Oct 12 19:56 memory_monitor_summary.json
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc    269428 Oct 12 19:56 log.46676269._070033.job.log.tgz.1
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc      7764 Oct 12 19:56 heartbeat.json
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc        95 Oct 12 19:56 pilot_heartbeat.json
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc      8192 Oct 12 19:57 boinc_mmap_file
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc        27 Oct 12 19:57 wrapper_checkpoint.txt
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc      4826 Oct 12 19:57 pilotlog.txt
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc    577878 Oct 12 19:57 log.46676269._070033.job.log.1
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc       357 Oct 12 19:57 output.list
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc       620 Oct 12 19:57 runtime_log
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc    870400 Oct 12 19:57 result.tar.gz
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc      8661 Oct 12 19:57 runtime_log.err
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc       641 Oct 12 19:57 3CzNDmAm1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeSiNDmsHLeLm.diag
[2025-10-12 19:57:24] -rw-r--r--. 1 boinc boinc     21349 Oct 12 19:57 stderr.txt
[2025-10-12 19:57:24] HITS file was successfully produced:
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc 191696975 Oct 12 19:56 shared/HITS.pool.root.1
[2025-10-12 19:57:24]  *** Contents of shared directory: ***
[2025-10-12 19:57:24] total 403952
[2025-10-12 19:57:24] -rw-r--r--. 2 boinc boinc 220483396 Oct 12 18:52 ATLAS.root_0
[2025-10-12 19:57:24] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:52 start_atlas.sh
[2025-10-12 19:57:24] -rw-r--r--. 2 boinc boinc    569673 Oct 12 18:52 input.tar.gz
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc 191696975 Oct 12 19:56 HITS.pool.root.1
[2025-10-12 19:57:24] -rw-------. 1 boinc boinc    870400 Oct 12 19:57 result.tar.gz
19:57:25 (3535964): run_atlas exited; CPU time 20720.253440
19:57:25 (3535964): called boinc_finish(0)

</stderr_txt>
]]>

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