Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:28:36 (3894): wrapper (7.7.26015): starting
10:28:36 (3894): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 10:28:36] Arguments: --nthreads 2
[2025-10-12 10:28:36] Threads: 2
[2025-10-12 10:28:36] Checking for CVMFS
[2025-10-12 10:28:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:28:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:28:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:28:42] 2.13.2.0 4104 0 29836 151613 3 1 3640630 8388609 0 130560 0 0 0.000 1291 551 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 10:28:42] CVMFS is ok
[2025-10-12 10:28:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:28:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 10:28:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 10:28:42] Further information can be found at the LHC@home message board.
[2025-10-12 10:28:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:28:42] Checking for apptainer binary...
[2025-10-12 10:28:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:28:42] Running /usr/bin/apptainer --version
[2025-10-12 10:28:42] apptainer version 1.4.3
[2025-10-12 10:28:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:28:42] debian-e15
[2025-10-12 10:28:42] apptainer works
[2025-10-12 10:28:42] Set ATHENA_PROC_NUMBER=2
[2025-10-12 10:28:42] Set ATHENA_CORE_NUMBER=2
[2025-10-12 10:28:42] Starting ATLAS job with PandaID=6839319334
[2025-10-12 10:28:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:47:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:47:39] 2025-10-12 10:47:03,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:47:39] 2025-10-12 10:47:03,942 | INFO     | time since job start (8284s) is within the limit (172800.0s)
[2025-10-12 12:47:39] 2025-10-12 10:47:05,947 | INFO     | time since job start (8286s) is within the limit (172800.0s)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,029 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:47:39] 2025-10-12 10:47:06,031 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2003.80625
[2025-10-12 12:47:39] 2025-10-12 10:47:06,032 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839319334/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,033 | INFO     | extracted standard info from prmon json
[2025-10-12 12:47:39] 2025-10-12 10:47:06,033 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:47:39] 2025-10-12 10:47:06,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:47:39] 2025-10-12 10:47:06,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:47:39] 2025-10-12 10:47:06,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:47:39] 2025-10-12 10:47:06,034 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:47:39] 2025-10-12 10:47:06,034 | INFO     | sum of square deviations: 779958810.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,034 | INFO     | sum of deviations: -35873384683.50001
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | mean x: 1760261877.5
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | mean y: 2396136.3161764704
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | -- intersect: 80963788796.59969
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | intersect: 80963788796.59969
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | chi2: 1.3710817986935555
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | sum of square deviations: 697054930.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | sum of deviations: -33827202483.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | mean x: 1760261725.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | mean y: 2399902.0534351147
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | -- intersect: 85425696161.71817
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | intersect: 85425696161.71817
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | chi2: 1.357546459307695
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | current chi2=1.357546459307695 (change=0.9872014491591851 %)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,035 | INFO     | right removable region: 130
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | sum of square deviations: 697054930.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | sum of deviations: -43675300147.000015
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | mean x: 1760262030.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | mean y: 2409834.6412213743
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | -- intersect: 110294969558.18774
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | intersect: 110294969558.18774
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | chi2: 0.30483112748829566
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | current chi2=0.30483112748829566 (change=77.76710858690153 %)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | sum of deviations: -38091990277.0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | mean x: 1760262182.5
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | mean y: 2398741.587301587
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | -- intersect: 108108030833.07835
[2025-10-12 12:47:39] 2025-10-12 10:47:06,036 | INFO     | intersect: 108108030833.07835
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | chi2: 0.3030821961809628
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | current chi2=0.3030821961809628 (change=0.5737377681024347 %)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | left removable region: 20
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | sum of deviations: -24982495130.5
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | mean x: 1760262304.5
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | mean y: 2377037.2818181817
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | -- intersect: 106561985077.51207
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | intersect: 106561985077.51207
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | chi2: 0.2728027796719793
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | -- intersect: 106561985077.51207
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | current memory leak: -60.54 B/s (using 110 data points, chi2=0.27)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | could have reported an average CPU frequency of 2615 MHz (8 samples)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | ..............................
[2025-10-12 12:47:39] 2025-10-12 10:47:06,037 | INFO     | . Timing measurements:
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . get job = 0 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . initial setup = 2 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . payload setup = 4 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . stage-in = 0 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . payload execution = 8255 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . stage-out = 0 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | . log creation = 0 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,038 | INFO     | ..............................
[2025-10-12 12:47:39] 2025-10-12 10:47:06,333 | INFO     | 
[2025-10-12 12:47:39] 2025-10-12 10:47:06,333 | INFO     | job summary report
[2025-10-12 12:47:39] 2025-10-12 10:47:06,333 | INFO     | --------------------------------------------------
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | PanDA job id: 6839319334
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | task id: 46676269
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | errors: (none)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | pilot state: finished 
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | transexitcode: 0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | exeerrorcode: 0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | exeerrordiag: 
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | exitcode: 0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | exitmsg: OK
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | cpuconsumptiontime: 16361 s
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | nevents: 400
[2025-10-12 12:47:39] 2025-10-12 10:47:06,334 | INFO     | neventsw: 0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | pid: 14899
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | pgrp: 14899
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | corecount: 2
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | event service: False
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | sizes: {0: 2348750, 1: 2348864, 3: 2349154, 11: 2349182, 8263: 2377176, 8264: 2386188, 8265: 2386372, 8273: 2386566}
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | --------------------------------------------------
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | 
[2025-10-12 12:47:39] 2025-10-12 10:47:06,335 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | job 6839319334 has completed (purged errors)
[2025-10-12 12:47:39] 2025-10-12 10:47:06,349 | INFO     | overall cleanup function is called
[2025-10-12 12:47:39] 2025-10-12 10:47:07,353 | INFO     | --- collectZombieJob: --- 10, [14899]
[2025-10-12 12:47:39] 2025-10-12 10:47:07,353 | INFO     | zombie collector waiting for pid 14899
[2025-10-12 12:47:39] 2025-10-12 10:47:07,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:47:39] 2025-10-12 10:47:07,353 | INFO     | collected zombie processes
[2025-10-12 12:47:39] 2025-10-12 10:47:07,353 | INFO     | will attempt to kill all subprocesses of pid=14899
[2025-10-12 12:47:39] 2025-10-12 10:47:07,401 | INFO     | process IDs to be killed: [14899] (in reverse order)
[2025-10-12 12:47:39] 2025-10-12 10:47:07,429 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:47:39] 2025-10-12 10:47:07,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:47:39] 2025-10-12 10:47:07,431 | INFO     | did not find any defunct processes belonging to 14899
[2025-10-12 12:47:39] 2025-10-12 10:47:07,432 | INFO     | did not find any defunct processes belonging to 14899
[2025-10-12 12:47:39] 2025-10-12 10:47:07,432 | INFO     | ready for new job
[2025-10-12 12:47:39] 2025-10-12 10:47:07,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:47:39] 2025-10-12 10:47:07,433 | INFO     | ***************************************
[2025-10-12 12:47:39] 2025-10-12 10:47:07,433 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:47:39] 2025-10-12 10:47:07,433 | INFO     | ***************************************
[2025-10-12 12:47:39] 2025-10-12 10:47:07,433 | INFO     | 
[2025-10-12 12:47:39] 2025-10-12 10:47:07,434 | INFO     | architecture information:
[2025-10-12 12:47:39] 2025-10-12 10:47:07,434 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:47:39] 2025-10-12 10:47:07,444 | INFO     | cat /etc/os-release:
[2025-10-12 12:47:39] NAME="CentOS Linux"
[2025-10-12 12:47:39] VERSION="7 (Core)"
[2025-10-12 12:47:39] ID="centos"
[2025-10-12 12:47:39] ID_LIKE="rhel fedora"
[2025-10-12 12:47:39] VERSION_ID="7"
[2025-10-12 12:47:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:47:39] ANSI_COLOR="0;31"
[2025-10-12 12:47:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:47:39] HOME_URL="https://www.centos.org/"
[2025-10-12 12:47:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:47:39] 
[2025-10-12 12:47:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:47:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:47:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:47:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:47:39] 
[2025-10-12 12:47:39] 2025-10-12 10:47:07,444 | INFO     | ***************************************
[2025-10-12 12:47:39] 2025-10-12 10:47:07,945 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 12:47:39] 2025-10-12 10:47:07,955 | INFO     | sufficient remaining disk space (75905368064 B)
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | INFO     | update_server=False
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | INFO     | aborting loop
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:47:39] 2025-10-12 10:47:07,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:47:39] 2025-10-12 10:47:08,289 | INFO     | all payload control threads have been joined
[2025-10-12 12:47:39] 2025-10-12 10:47:08,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:47:39] 2025-10-12 10:47:08,961 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:08,961 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:08,962 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:08,962 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:08,985 | INFO     | all data control threads have been joined
[2025-10-12 12:47:39] 2025-10-12 10:47:09,100 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:09,125 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:09,295 | INFO     | [payload] control thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:09,455 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:09,497 | INFO     | all job control threads have been joined
[2025-10-12 12:47:39] 2025-10-12 10:47:09,961 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:09,989 | INFO     | [data] control thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:10,031 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:10,263 | INFO     | [job] validate thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:10,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:10,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:10,503 | INFO     | [job] control thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:11,085 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:47:39] 2025-10-12 10:47:12,834 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:47:39] 2025-10-12 10:47:13,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073863423808)>', '<ExcThread(monitor, started 140073060243200)>']
[2025-10-12 12:47:39] 2025-10-12 10:47:18,512 | INFO     | all workflow threads have been joined
[2025-10-12 12:47:39] 2025-10-12 10:47:18,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:47:39] 2025-10-12 10:47:18,513 | INFO     | traces error code: 0
[2025-10-12 12:47:39] 2025-10-12 10:47:18,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:47:39] 2025-10-12 10:47:39,115 | INFO     | PID=8248 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 12:47:39] 2025-10-12 10:47:39,115 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:47:39] 2025-10-12 10:47:39,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:47:39] 2025-10-12 10:47:39,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:47:39] 2025-10-12 10:47:39,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:47:39] 2025-10-12 10:47:39,116 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 12:47:39] 2025-10-12 10:47:39,116 | INFO     | [monitor] control thread has ended
[2025-10-12 12:47:39] 2025-10-12 10:47:39,185 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:47:39] 2025-10-12 10:47:39,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:47:39] 2025-10-12 10:47:39,190 [wrapper] pilotpid: 8248
[2025-10-12 12:47:39] 2025-10-12 10:47:39,192 [wrapper] Pilot exit status: 0
[2025-10-12 12:47:39] 2025-10-12 10:47:39,200 [wrapper] pandaids: 6839319334
[2025-10-12 12:47:39] 2025-10-12 10:47:39,219 [wrapper] cleanup supervisor_pilot   49573 8249
[2025-10-12 12:47:39] 2025-10-12 10:47:39,222 [wrapper] Test setup, not cleaning
[2025-10-12 12:47:39] 2025-10-12 10:47:39,224 [wrapper] apfmon messages muted
[2025-10-12 12:47:39] 2025-10-12 10:47:39,227 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:47:39] 2025-10-12 10:47:39,229 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:47:39]  *** Error codes and diagnostics ***
[2025-10-12 12:47:39]     "exeErrorCode": 0,
[2025-10-12 12:47:39]     "exeErrorDiag": "",
[2025-10-12 12:47:39]     "pilotErrorCode": 0,
[2025-10-12 12:47:39]     "pilotErrorDiag": "",
[2025-10-12 12:47:39]  *** Listing of results directory ***
[2025-10-12 12:47:39] total 410312
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:17 queuedata.json
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:18 pilot3.tar.gz
[2025-10-12 12:47:39] -rwx------ 1 boinc boinc     36292 Oct 12 05:18 runpilot2-wrapper.sh
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:47:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:28 run_atlas
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:28 job.xml
[2025-10-12 12:47:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:28 start_atlas.sh
[2025-10-12 12:47:39] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:28 shared
[2025-10-12 12:47:39] -rw-r--r-- 2 boinc boinc    569676 Oct 12 10:28 input.tar.gz
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc      6814 Oct 12 10:28 init_data.xml
[2025-10-12 12:47:39] -rw-r--r-- 2 boinc boinc 220483396 Oct 12 10:28 EVNT.46676267._003216.pool.root.1
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:28 boinc_lockfile
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:28 pandaJob.out
[2025-10-12 12:47:39] -rw------- 1 boinc boinc    975520 Oct 12 10:28 agis_schedconf.cvmfs.json
[2025-10-12 12:47:39] -rw------- 1 boinc boinc   1560580 Oct 12 10:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:47:39] drwx------ 5 boinc boinc      4096 Oct 12 10:28 pilot3
[2025-10-12 12:47:39] -rw------- 1 boinc boinc 192845096 Oct 12 12:46 HITS.46676269._070036.pool.root.1
[2025-10-12 12:47:39] -rw------- 1 boinc boinc        95 Oct 12 12:46 pilot_heartbeat.json
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc       529 Oct 12 12:46 boinc_task_state.xml
[2025-10-12 12:47:39] -rw------- 1 boinc boinc      1023 Oct 12 12:46 memory_monitor_summary.json
[2025-10-12 12:47:39] -rw------- 1 boinc boinc    277861 Oct 12 12:46 log.46676269._070036.job.log.tgz.1
[2025-10-12 12:47:39] -rw------- 1 boinc boinc      7774 Oct 12 12:47 heartbeat.json
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:47 boinc_mmap_file
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:47 wrapper_checkpoint.txt
[2025-10-12 12:47:39] -rw------- 1 boinc boinc       814 Oct 12 12:47 pilotlog.txt
[2025-10-12 12:47:39] -rw------- 1 boinc boinc   1184194 Oct 12 12:47 log.46676269._070036.job.log.1
[2025-10-12 12:47:39] -rw------- 1 boinc boinc       357 Oct 12 12:47 output.list
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:47 runtime_log
[2025-10-12 12:47:39] -rw------- 1 boinc boinc   1484800 Oct 12 12:47 result.tar.gz
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc      8773 Oct 12 12:47 runtime_log.err
[2025-10-12 12:47:39] -rw------- 1 boinc boinc       645 Oct 12 12:47 CnJNDmPm1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrSiNDmqRyhFn.diag
[2025-10-12 12:47:39] -rw-r--r-- 1 boinc boinc     21141 Oct 12 12:47 stderr.txt
[2025-10-12 12:47:39] HITS file was successfully produced:
[2025-10-12 12:47:39] -rw------- 1 boinc boinc 192845096 Oct 12 12:46 shared/HITS.pool.root.1
[2025-10-12 12:47:39]  *** Contents of shared directory: ***
[2025-10-12 12:47:39] total 405680
[2025-10-12 12:47:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:28 start_atlas.sh
[2025-10-12 12:47:39] -rw-r--r-- 2 boinc boinc    569676 Oct 12 10:28 input.tar.gz
[2025-10-12 12:47:39] -rw-r--r-- 2 boinc boinc 220483396 Oct 12 10:28 ATLAS.root_0
[2025-10-12 12:47:39] -rw------- 1 boinc boinc 192845096 Oct 12 12:46 HITS.pool.root.1
[2025-10-12 12:47:39] -rw------- 1 boinc boinc   1484800 Oct 12 12:47 result.tar.gz
12:47:40 (3894): run_atlas exited; CPU time 16411.162681
12:47:40 (3894): called boinc_finish(0)

</stderr_txt>
]]>

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