Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:24:44 (6351): wrapper (7.7.26015): starting
04:24:44 (6351): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:24:44] Arguments: --nthreads 8
[2025-10-12 04:24:44] Threads: 8
[2025-10-12 04:24:44] Checking for CVMFS
[2025-10-12 04:24:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:24:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:24:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:24:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:24:45] 2.11.2.0 2847 8256 74556 151613 1 57 12076496 20275200 1 130560 0 4943598 99.988 276197 31282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 04:24:45] CVMFS is ok
[2025-10-12 04:24:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:24:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:24:45] Further information can be found at the LHC@home message board.
[2025-10-12 04:24:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:24:45] Checking for apptainer binary...
[2025-10-12 04:24:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:24:45] Running /usr/bin/apptainer --version
[2025-10-12 04:24:45] apptainer version 1.3.2-1.el7
[2025-10-12 04:24:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:24:47] c-204-19.aglt2.org
[2025-10-12 04:24:47] apptainer works
[2025-10-12 04:24:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:24:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:24:47] Starting ATLAS job with PandaID=6839319323
[2025-10-12 04:24:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:34:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:34:22] 2025-10-12 10:33:38,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:34:22] 2025-10-12 10:33:38,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:34:22] 2025-10-12 10:33:38,741 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:34:22] 2025-10-12 10:33:38,742 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 06:34:22] 2025-10-12 10:33:38,743 | INFO     | sum of deviations: -3030063278.500003
[2025-10-12 06:34:22] 2025-10-12 10:33:38,743 | INFO     | mean x: 1760261348.5
[2025-10-12 06:34:22] 2025-10-12 10:33:38,743 | INFO     | mean y: 2585443.3412698414
[2025-10-12 06:34:22] 2025-10-12 10:33:38,743 | INFO     | -- intersect: 8601945792.288912
[2025-10-12 06:34:22] 2025-10-12 10:33:38,743 | INFO     | intersect: 8601945792.288912
[2025-10-12 06:34:22] 2025-10-12 10:33:38,744 | INFO     | chi2: 1.6252183361330097
[2025-10-12 06:34:22] 2025-10-12 10:33:38,744 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | sum of deviations: -2186791500.999999
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | mean x: 1760261196.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | mean y: 2587256.8429752067
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | -- intersect: 7010353740.361026
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | intersect: 7010353740.361026
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | chi2: 1.6270323699338678
[2025-10-12 06:34:22] 2025-10-12 10:33:38,745 | INFO     | current chi2=1.6270323699338678 (change=-0.11161785223112522 %)
[2025-10-12 06:34:22] 2025-10-12 10:33:38,746 | INFO     | right removable region: 120
[2025-10-12 06:34:22] 2025-10-12 10:33:38,746 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,746 | INFO     | sum of deviations: -22375972542.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,746 | INFO     | mean x: 1760261501.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,747 | INFO     | mean y: 2626286.7603305783
[2025-10-12 06:34:22] 2025-10-12 10:33:38,747 | INFO     | -- intersect: 71708418774.93579
[2025-10-12 06:34:22] 2025-10-12 10:33:38,747 | INFO     | intersect: 71708418774.93579
[2025-10-12 06:34:22] 2025-10-12 10:33:38,747 | INFO     | chi2: 0.15242901909449438
[2025-10-12 06:34:22] 2025-10-12 10:33:38,747 | INFO     | current chi2=0.15242901909449438 (change=90.62101283836245 %)
[2025-10-12 06:34:22] 2025-10-12 10:33:38,747 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,748 | INFO     | sum of deviations: -23785841630.000004
[2025-10-12 06:34:22] 2025-10-12 10:33:38,748 | INFO     | mean x: 1760261653.5
[2025-10-12 06:34:22] 2025-10-12 10:33:38,748 | INFO     | mean y: 2629455.6551724137
[2025-10-12 06:34:22] 2025-10-12 10:33:38,748 | INFO     | -- intersect: 86514486746.18784
[2025-10-12 06:34:22] 2025-10-12 10:33:38,749 | INFO     | intersect: 86514486746.18784
[2025-10-12 06:34:22] 2025-10-12 10:33:38,749 | INFO     | chi2: 0.1023661560466581
[2025-10-12 06:34:22] 2025-10-12 10:33:38,749 | INFO     | current chi2=0.1023661560466581 (change=32.843393826999 %)
[2025-10-12 06:34:22] 2025-10-12 10:33:38,749 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,750 | INFO     | sum of deviations: -21363100237.999996
[2025-10-12 06:34:22] 2025-10-12 10:33:38,750 | INFO     | mean x: 1760261806.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,750 | INFO     | mean y: 2623272.6306306305
[2025-10-12 06:34:22] 2025-10-12 10:33:38,750 | INFO     | -- intersect: 88683388799.35165
[2025-10-12 06:34:22] 2025-10-12 10:33:38,750 | INFO     | intersect: 88683388799.35165
[2025-10-12 06:34:22] 2025-10-12 10:33:38,751 | INFO     | chi2: 0.10162219831490589
[2025-10-12 06:34:22] 2025-10-12 10:33:38,751 | INFO     | current chi2=0.10162219831490589 (change=0.7267614224110466 %)
[2025-10-12 06:34:22] 2025-10-12 10:33:38,751 | INFO     | left removable region: 30
[2025-10-12 06:34:22] 2025-10-12 10:33:38,751 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 06:34:22] 2025-10-12 10:33:38,751 | INFO     | sum of deviations: -11162428064.0
[2025-10-12 06:34:22] 2025-10-12 10:33:38,752 | INFO     | mean x: 1760262080.5
[2025-10-12 06:34:22] 2025-10-12 10:33:38,752 | INFO     | mean y: 2598211.577777778
[2025-10-12 06:34:22] 2025-10-12 10:33:38,752 | INFO     | -- intersect: 86935399472.00006
[2025-10-12 06:34:22] 2025-10-12 10:33:38,752 | INFO     | intersect: 86935399472.00006
[2025-10-12 06:34:22] 2025-10-12 10:33:38,752 | INFO     | chi2: 0.09103771037909916
[2025-10-12 06:34:22] 2025-10-12 10:33:38,752 | INFO     | -- intersect: 86935399472.00006
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | current memory leak: -49.39 B/s (using 90 data points, chi2=0.09)
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | ..............................
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | . Timing measurements:
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | . get job = 0 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | . initial setup = 2 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,753 | INFO     | . payload setup = 8 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,754 | INFO     | . stage-in = 0 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,754 | INFO     | . payload execution = 7674 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,754 | INFO     | . stage-out = 0 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,754 | INFO     | . log creation = 0 s
[2025-10-12 06:34:22] 2025-10-12 10:33:38,754 | INFO     | ..............................
[2025-10-12 06:34:22] 2025-10-12 10:33:39,252 | INFO     | 
[2025-10-12 06:34:22] 2025-10-12 10:33:39,252 | INFO     | job summary report
[2025-10-12 06:34:22] 2025-10-12 10:33:39,253 | INFO     | --------------------------------------------------
[2025-10-12 06:34:22] 2025-10-12 10:33:39,253 | INFO     | PanDA job id: 6839319323
[2025-10-12 06:34:22] 2025-10-12 10:33:39,253 | INFO     | task id: 46676269
[2025-10-12 06:34:22] 2025-10-12 10:33:39,253 | INFO     | errors: (none)
[2025-10-12 06:34:22] 2025-10-12 10:33:39,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | pilot state: finished 
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | transexitcode: 0
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | exeerrorcode: 0
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | exeerrordiag: 
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | exitcode: 0
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | exitmsg: OK
[2025-10-12 06:34:22] 2025-10-12 10:33:39,254 | INFO     | cpuconsumptiontime: 56383 s
[2025-10-12 06:34:22] 2025-10-12 10:33:39,255 | INFO     | nevents: 400
[2025-10-12 06:34:22] 2025-10-12 10:33:39,255 | INFO     | neventsw: 0
[2025-10-12 06:34:22] 2025-10-12 10:33:39,255 | INFO     | pid: 16582
[2025-10-12 06:34:22] 2025-10-12 10:33:39,255 | INFO     | pgrp: 16582
[2025-10-12 06:34:22] 2025-10-12 10:33:39,255 | INFO     | corecount: 8
[2025-10-12 06:34:22] 2025-10-12 10:33:39,255 | INFO     | event service: False
[2025-10-12 06:34:22] 2025-10-12 10:33:39,256 | INFO     | sizes: {0: 2348685, 1: 2348884, 6: 2349146, 11: 2349174, 7686: 2376727, 7687: 2376726, 7689: 2385964, 7697: 2386102}
[2025-10-12 06:34:22] 2025-10-12 10:33:39,256 | INFO     | --------------------------------------------------
[2025-10-12 06:34:22] 2025-10-12 10:33:39,256 | INFO     | 
[2025-10-12 06:34:22] 2025-10-12 10:33:39,256 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 06:34:22] 2025-10-12 10:33:39,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:34:22] 2025-10-12 10:33:39,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:34:22] 2025-10-12 10:33:39,288 | INFO     | job 6839319323 has completed (purged errors)
[2025-10-12 06:34:22] 2025-10-12 10:33:39,289 | INFO     | overall cleanup function is called
[2025-10-12 06:34:22] 2025-10-12 10:33:40,295 | INFO     | --- collectZombieJob: --- 10, [16582]
[2025-10-12 06:34:22] 2025-10-12 10:33:40,295 | INFO     | zombie collector waiting for pid 16582
[2025-10-12 06:34:22] 2025-10-12 10:33:40,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:34:22] 2025-10-12 10:33:40,296 | INFO     | collected zombie processes
[2025-10-12 06:34:22] 2025-10-12 10:33:40,296 | INFO     | will attempt to kill all subprocesses of pid=16582
[2025-10-12 06:34:22] 2025-10-12 10:33:40,386 | INFO     | process IDs to be killed: [16582] (in reverse order)
[2025-10-12 06:34:22] 2025-10-12 10:33:40,475 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:34:22] 2025-10-12 10:33:40,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:34:22] 2025-10-12 10:33:40,479 | INFO     | did not find any defunct processes belonging to 16582
[2025-10-12 06:34:22] 2025-10-12 10:33:40,484 | INFO     | did not find any defunct processes belonging to 16582
[2025-10-12 06:34:22] 2025-10-12 10:33:40,484 | INFO     | ready for new job
[2025-10-12 06:34:22] 2025-10-12 10:33:40,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:34:22] 2025-10-12 10:33:40,486 | INFO     | ***************************************
[2025-10-12 06:34:22] 2025-10-12 10:33:40,486 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:34:22] 2025-10-12 10:33:40,486 | INFO     | ***************************************
[2025-10-12 06:34:22] 2025-10-12 10:33:40,486 | INFO     | 
[2025-10-12 06:34:22] 2025-10-12 10:33:40,487 | INFO     | architecture information:
[2025-10-12 06:34:22] 2025-10-12 10:33:40,487 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:34:22] 2025-10-12 10:33:40,505 | INFO     | cat /etc/os-release:
[2025-10-12 06:34:22] NAME="CentOS Linux"
[2025-10-12 06:34:22] VERSION="7 (Core)"
[2025-10-12 06:34:22] ID="centos"
[2025-10-12 06:34:22] ID_LIKE="rhel fedora"
[2025-10-12 06:34:22] VERSION_ID="7"
[2025-10-12 06:34:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:34:22] ANSI_COLOR="0;31"
[2025-10-12 06:34:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:34:22] HOME_URL="https://www.centos.org/"
[2025-10-12 06:34:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:34:22] 
[2025-10-12 06:34:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:34:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:34:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:34:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:34:22] 
[2025-10-12 06:34:22] 2025-10-12 10:33:40,505 | INFO     | ***************************************
[2025-10-12 06:34:22] 2025-10-12 10:33:41,009 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 06:34:22] 2025-10-12 10:33:41,028 | INFO     | sufficient remaining disk space (18537775104 B)
[2025-10-12 06:34:22] 2025-10-12 10:33:41,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:34:22] 2025-10-12 10:33:41,029 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:34:22] 2025-10-12 10:33:41,029 | INFO     | update_server=False
[2025-10-12 06:34:22] 2025-10-12 10:33:41,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:34:22] 2025-10-12 10:33:41,085 | INFO     | all payload control threads have been joined
[2025-10-12 06:34:22] 2025-10-12 10:33:41,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:34:22] 2025-10-12 10:33:41,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:34:22] 2025-10-12 10:33:41,435 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 06:34:22] 2025-10-12 10:33:41,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 06:34:22] 2025-10-12 10:33:41,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:34:22] 2025-10-12 10:33:41,436 | INFO     | will abort loop
[2025-10-12 06:34:22] 2025-10-12 10:33:41,615 | INFO     | all data control threads have been joined
[2025-10-12 06:34:22] 2025-10-12 10:33:42,030 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,090 | INFO     | [payload] control thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,188 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,233 | INFO     | all job control threads have been joined
[2025-10-12 06:34:22] 2025-10-12 10:33:42,361 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,437 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,470 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,621 | INFO     | [data] control thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:42,627 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:43,234 | INFO     | [job] control thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:43,286 | INFO     | [job] validate thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:43,300 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:43,368 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:43,415 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:43,855 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:34:22] 2025-10-12 10:33:44,856 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:33:45,384 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:34:22] 2025-10-12 10:34:11,663 | INFO     | PID=10027 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 06:34:22] 2025-10-12 10:34:11,664 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:34:22] 2025-10-12 10:34:11,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:34:22] 2025-10-12 10:34:11,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:34:22] 2025-10-12 10:34:16,491 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:34:22] 2025-10-12 10:34:17,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218753611584)>', '<ExcThread(monitor, started 140217663092480)>']
[2025-10-12 06:34:22] 2025-10-12 10:34:17,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:34:22] 2025-10-12 10:34:17,686 | INFO     | [monitor] control thread has ended
[2025-10-12 06:34:22] 2025-10-12 10:34:22,151 | INFO     | all workflow threads have been joined
[2025-10-12 06:34:22] 2025-10-12 10:34:22,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:34:22] 2025-10-12 10:34:22,159 | INFO     | traces error code: 0
[2025-10-12 06:34:22] 2025-10-12 10:34:22,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:34:22] 2025-10-12 10:34:22,279 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:34:22] 2025-10-12 10:34:22,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:34:22] 2025-10-12 10:34:22,288 [wrapper] pilotpid: 10027
[2025-10-12 06:34:22] 2025-10-12 10:34:22,294 [wrapper] Pilot exit status: 0
[2025-10-12 06:34:22] 2025-10-12 10:34:22,313 [wrapper] pandaids: 6839319323
[2025-10-12 06:34:22] 2025-10-12 10:34:22,364 [wrapper] cleanup supervisor_pilot 10376 10028
[2025-10-12 06:34:22] 2025-10-12 10:34:22,369 [wrapper] Test setup, not cleaning
[2025-10-12 06:34:22] 2025-10-12 10:34:22,374 [wrapper] apfmon messages muted
[2025-10-12 06:34:22] 2025-10-12 10:34:22,379 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:34:22] 2025-10-12 10:34:22,383 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:34:22]  *** Error codes and diagnostics ***
[2025-10-12 06:34:22]     "exeErrorCode": 0,
[2025-10-12 06:34:22]     "exeErrorDiag": "",
[2025-10-12 06:34:22]     "pilotErrorCode": 0,
[2025-10-12 06:34:22]     "pilotErrorDiag": "",
[2025-10-12 06:34:22]  *** Listing of results directory ***
[2025-10-12 06:34:22] total 423352
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 06:34:22] -rwx------ 1 boincer umatlas     36292 Oct 11 23:14 runpilot2-wrapper.sh
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 23:14 queuedata.json
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:34:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 04:24 run_atlas
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 04:24 job.xml
[2025-10-12 06:34:22] -rw-r--r-- 2 boincer umatlas 224721727 Oct 12 04:24 EVNT.46676267._003215.pool.root.1
[2025-10-12 06:34:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:24 start_atlas.sh
[2025-10-12 06:34:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 04:24 shared
[2025-10-12 06:34:22] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 04:24 input.tar.gz
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 04:24 boinc_lockfile
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 04:24 pandaJob.out
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas    975520 Oct 12 04:25 agis_schedconf.cvmfs.json
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas   1560580 Oct 12 04:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:34:22] drwx------ 5 boincer umatlas      4096 Oct 12 04:25 pilot3
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 06:27 init_data.xml
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas 201949757 Oct 12 06:32 HITS.46676269._070025.pool.root.1
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas       529 Oct 12 06:33 boinc_task_state.xml
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas      1049 Oct 12 06:33 memory_monitor_summary.json
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas    378000 Oct 12 06:33 log.46676269._070025.job.log.tgz.1
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas      7851 Oct 12 06:33 heartbeat.json
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas        95 Oct 12 06:34 pilot_heartbeat.json
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas        27 Oct 12 06:34 wrapper_checkpoint.txt
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 06:34 boinc_mmap_file
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas      4932 Oct 12 06:34 pilotlog.txt
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas   1087308 Oct 12 06:34 log.46676269._070025.job.log.1
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas       357 Oct 12 06:34 output.list
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 06:34 runtime_log
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas   1484800 Oct 12 06:34 result.tar.gz
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 06:34 runtime_log.err
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas       659 Oct 12 06:34 NiqKDmGi1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbSiNDmPp0vjn.diag
[2025-10-12 06:34:22] -rw-r--r-- 1 boincer umatlas     20888 Oct 12 06:34 stderr.txt
[2025-10-12 06:34:22] HITS file was successfully produced:
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas 201949757 Oct 12 06:32 shared/HITS.pool.root.1
[2025-10-12 06:34:22]  *** Contents of shared directory: ***
[2025-10-12 06:34:22] total 418712
[2025-10-12 06:34:22] -rw-r--r-- 2 boincer umatlas 224721727 Oct 12 04:24 ATLAS.root_0
[2025-10-12 06:34:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:24 start_atlas.sh
[2025-10-12 06:34:22] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 04:24 input.tar.gz
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas 201949757 Oct 12 06:32 HITS.pool.root.1
[2025-10-12 06:34:22] -rw------- 1 boincer umatlas   1484800 Oct 12 06:34 result.tar.gz
06:34:24 (6351): run_atlas exited; CPU time 56399.303029
06:34:24 (6351): called boinc_finish(0)

</stderr_txt>
]]>

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