Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:17:10 (20048): wrapper (7.7.26015): starting
04:17:10 (20048): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:17:10] Arguments: --nthreads 8
[2025-10-12 04:17:10] Threads: 8
[2025-10-12 04:17:10] Checking for CVMFS
[2025-10-12 04:17:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:17:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:17:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:17:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:17:11] 2.11.2.0 27562 269016 271700 151612 3 188 16040906 18432000 2749 130560 7 627505375 99.264 1123215167 26113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 04:17:11] CVMFS is ok
[2025-10-12 04:17:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:17:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:17:11] Further information can be found at the LHC@home message board.
[2025-10-12 04:17:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:17:11] Checking for apptainer binary...
[2025-10-12 04:17:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:17:11] Running /usr/bin/apptainer --version
[2025-10-12 04:17:11] apptainer version 1.3.2-1.el7
[2025-10-12 04:17:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:17:12] c-9-30.aglt2.org
[2025-10-12 04:17:12] apptainer works
[2025-10-12 04:17:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:17:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:17:12] Starting ATLAS job with PandaID=6839319344
[2025-10-12 04:17:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:02:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:02:45] 2025-10-12 11:02:03,679 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 07:02:45] 2025-10-12 11:02:03,680 | INFO     | sum of deviations: 11655155686.000004
[2025-10-12 07:02:45] 2025-10-12 11:02:03,680 | INFO     | mean x: 1760261980.5
[2025-10-12 07:02:45] 2025-10-12 11:02:03,680 | INFO     | mean y: 2452261.407407407
[2025-10-12 07:02:45] 2025-10-12 11:02:03,680 | INFO     | -- intersect: -15560373993.318542
[2025-10-12 07:02:45] 2025-10-12 11:02:03,681 | INFO     | intersect: -15560373993.318542
[2025-10-12 07:02:45] 2025-10-12 11:02:03,681 | INFO     | chi2: 2.2513394242457894
[2025-10-12 07:02:45] 2025-10-12 11:02:03,681 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | sum of deviations: 22059441224.000004
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | mean x: 1760261828.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | mean y: 2465315.4522292996
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | -- intersect: -32357795770.743942
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | intersect: -32357795770.743942
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | chi2: 1.4278419312257709
[2025-10-12 07:02:45] 2025-10-12 11:02:03,682 | INFO     | current chi2=1.4278419312257709 (change=36.57811363987883 %)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,683 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,683 | INFO     | sum of deviations: 21327630476.5
[2025-10-12 07:02:45] 2025-10-12 11:02:03,683 | INFO     | mean x: 1760261675.5
[2025-10-12 07:02:45] 2025-10-12 11:02:03,683 | INFO     | mean y: 2464310.0197368423
[2025-10-12 07:02:45] 2025-10-12 11:02:03,683 | INFO     | -- intersect: -34474534279.35598
[2025-10-12 07:02:45] 2025-10-12 11:02:03,684 | INFO     | intersect: -34474534279.35598
[2025-10-12 07:02:45] 2025-10-12 11:02:03,684 | INFO     | chi2: 1.428987645085438
[2025-10-12 07:02:45] 2025-10-12 11:02:03,684 | INFO     | current chi2=1.428987645085438 (change=-0.08024094506620476 %)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,684 | INFO     | right removable region: 151
[2025-10-12 07:02:45] 2025-10-12 11:02:03,684 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | sum of deviations: -13491200115.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | mean x: 1760262133.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | mean y: 2484278.286624204
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | -- intersect: 19793503883.007893
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | intersect: 19793503883.007893
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | chi2: 0.8528361039044048
[2025-10-12 07:02:45] 2025-10-12 11:02:03,685 | INFO     | current chi2=0.8528361039044048 (change=62.11872387078598 %)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,686 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,686 | INFO     | sum of deviations: -13637274436.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,686 | INFO     | mean x: 1760262285.5
[2025-10-12 07:02:45] 2025-10-12 11:02:03,686 | INFO     | mean y: 2484467.5789473685
[2025-10-12 07:02:45] 2025-10-12 11:02:03,687 | INFO     | -- intersect: 22047711430.0482
[2025-10-12 07:02:45] 2025-10-12 11:02:03,687 | INFO     | intersect: 22047711430.0482
[2025-10-12 07:02:45] 2025-10-12 11:02:03,687 | INFO     | chi2: 0.852176316604959
[2025-10-12 07:02:45] 2025-10-12 11:02:03,687 | INFO     | current chi2=0.852176316604959 (change=0.07736390338368936 %)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,687 | INFO     | left removable region: 20
[2025-10-12 07:02:45] 2025-10-12 11:02:03,687 | INFO     | sum of square deviations: 697054930.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | sum of deviations: -2014184559.0000002
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | mean x: 1760262255.0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | mean y: 2497862.396946565
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | -- intersect: 5088887616.231011
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | intersect: 5088887616.231011
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | chi2: 0.0015793694477802555
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | -- intersect: 5088887616.231011
[2025-10-12 07:02:45] 2025-10-12 11:02:03,688 | INFO     | current memory leak: -2.89 B/s (using 131 data points, chi2=0.00)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | ..............................
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . Timing measurements:
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . get job = 0 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . initial setup = 2 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . payload setup = 5 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . stage-in = 0 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . payload execution = 9850 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,689 | INFO     | . stage-out = 1 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,690 | INFO     | . log creation = 0 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,690 | INFO     | ..............................
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | 
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | job summary report
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | --------------------------------------------------
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | PanDA job id: 6839319344
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | task id: 46676269
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | errors: (none)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | pilot state: finished 
[2025-10-12 07:02:45] 2025-10-12 11:02:03,795 | INFO     | transexitcode: 0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | exeerrorcode: 0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | exeerrordiag: 
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | exitcode: 0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | exitmsg: OK
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | cpuconsumptiontime: 74368 s
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | nevents: 400
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | neventsw: 0
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | pid: 31454
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | pgrp: 31454
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | corecount: 8
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | event service: False
[2025-10-12 07:02:45] 2025-10-12 11:02:03,796 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 12: 2349203, 9858: 2377650, 9860: 2386648, 9861: 2386832, 9864: 2387090}
[2025-10-12 07:02:45] 2025-10-12 11:02:03,797 | INFO     | --------------------------------------------------
[2025-10-12 07:02:45] 2025-10-12 11:02:03,797 | INFO     | 
[2025-10-12 07:02:45] 2025-10-12 11:02:03,797 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 07:02:45] 2025-10-12 11:02:03,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | job 6839319344 has completed (purged errors)
[2025-10-12 07:02:45] 2025-10-12 11:02:03,814 | INFO     | overall cleanup function is called
[2025-10-12 07:02:45] 2025-10-12 11:02:04,821 | INFO     | --- collectZombieJob: --- 10, [31454]
[2025-10-12 07:02:45] 2025-10-12 11:02:04,822 | INFO     | zombie collector waiting for pid 31454
[2025-10-12 07:02:45] 2025-10-12 11:02:04,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:02:45] 2025-10-12 11:02:04,822 | INFO     | collected zombie processes
[2025-10-12 07:02:45] 2025-10-12 11:02:04,822 | INFO     | will attempt to kill all subprocesses of pid=31454
[2025-10-12 07:02:45] 2025-10-12 11:02:05,155 | INFO     | process IDs to be killed: [31454] (in reverse order)
[2025-10-12 07:02:45] 2025-10-12 11:02:05,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:02:45] 2025-10-12 11:02:05,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:02:45] 2025-10-12 11:02:05,252 | INFO     | did not find any defunct processes belonging to 31454
[2025-10-12 07:02:45] 2025-10-12 11:02:05,257 | INFO     | did not find any defunct processes belonging to 31454
[2025-10-12 07:02:45] 2025-10-12 11:02:05,257 | INFO     | ready for new job
[2025-10-12 07:02:45] 2025-10-12 11:02:05,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:02:45] 2025-10-12 11:02:05,258 | INFO     | ***************************************
[2025-10-12 07:02:45] 2025-10-12 11:02:05,258 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:02:45] 2025-10-12 11:02:05,258 | INFO     | ***************************************
[2025-10-12 07:02:45] 2025-10-12 11:02:05,259 | INFO     | 
[2025-10-12 07:02:45] 2025-10-12 11:02:05,260 | INFO     | architecture information:
[2025-10-12 07:02:45] 2025-10-12 11:02:05,260 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:02:45] 2025-10-12 11:02:05,275 | INFO     | cat /etc/os-release:
[2025-10-12 07:02:45] NAME="CentOS Linux"
[2025-10-12 07:02:45] VERSION="7 (Core)"
[2025-10-12 07:02:45] ID="centos"
[2025-10-12 07:02:45] ID_LIKE="rhel fedora"
[2025-10-12 07:02:45] VERSION_ID="7"
[2025-10-12 07:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:02:45] ANSI_COLOR="0;31"
[2025-10-12 07:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:02:45] HOME_URL="https://www.centos.org/"
[2025-10-12 07:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:02:45] 
[2025-10-12 07:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:02:45] 
[2025-10-12 07:02:45] 2025-10-12 11:02:05,275 | INFO     | ***************************************
[2025-10-12 07:02:45] 2025-10-12 11:02:05,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 07:02:45] 2025-10-12 11:02:05,794 | INFO     | sufficient remaining disk space (104904785920 B)
[2025-10-12 07:02:45] 2025-10-12 11:02:05,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:02:45] 2025-10-12 11:02:05,795 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:02:45] 2025-10-12 11:02:05,795 | INFO     | update_server=False
[2025-10-12 07:02:45] 2025-10-12 11:02:05,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:02:45] 2025-10-12 11:02:05,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:02:45] 2025-10-12 11:02:05,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:02:45] 2025-10-12 11:02:05,814 | INFO     | all data control threads have been joined
[2025-10-12 07:02:45] 2025-10-12 11:02:06,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:02:45] 2025-10-12 11:02:06,180 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 07:02:45] 2025-10-12 11:02:06,181 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 07:02:45] 2025-10-12 11:02:06,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:02:45] 2025-10-12 11:02:06,181 | INFO     | will abort loop
[2025-10-12 07:02:45] 2025-10-12 11:02:06,477 | INFO     | all payload control threads have been joined
[2025-10-12 07:02:45] 2025-10-12 11:02:06,801 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:06,801 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:06,820 | INFO     | [data] control thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,035 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,069 | INFO     | [job] validate thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,074 | INFO     | all job control threads have been joined
[2025-10-12 07:02:45] 2025-10-12 11:02:07,186 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,291 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,483 | INFO     | [payload] control thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,590 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,802 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:07,944 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:08,080 | INFO     | [job] control thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:08,186 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:08,330 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:10,104 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:16,691 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:02:45] 2025-10-12 11:02:17,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:02:45] 2025-10-12 11:02:21,312 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-12 07:02:45] 2025-10-12 11:02:36,658 | INFO     | PID=24449 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 07:02:45] 2025-10-12 11:02:36,658 | INFO     | .. there are 4 such processes running
[2025-10-12 07:02:45] 2025-10-12 11:02:36,659 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:02:45] 2025-10-12 11:02:36,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:02:45] 2025-10-12 11:02:36,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:02:45] 2025-10-12 11:02:38,866 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:02:45] 2025-10-12 11:02:39,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887904376640)>', '<ExcThread(monitor, started 139887445518080)>']
[2025-10-12 07:02:45] 2025-10-12 11:02:40,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:02:45] 2025-10-12 11:02:40,680 | INFO     | [monitor] control thread has ended
[2025-10-12 07:02:45] 2025-10-12 11:02:44,897 | INFO     | all workflow threads have been joined
[2025-10-12 07:02:45] 2025-10-12 11:02:44,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:02:45] 2025-10-12 11:02:44,897 | INFO     | traces error code: 0
[2025-10-12 07:02:45] 2025-10-12 11:02:44,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:02:45] 2025-10-12 11:02:45,004 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:02:45] 2025-10-12 11:02:45,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:02:45] 2025-10-12 11:02:45,008 [wrapper] pilotpid: 24449
[2025-10-12 07:02:45] 2025-10-12 11:02:45,013 [wrapper] Pilot exit status: 0
[2025-10-12 07:02:45] 2025-10-12 11:02:45,059 [wrapper] pandaids: 6839319344
[2025-10-12 07:02:45] 2025-10-12 11:02:45,119 [wrapper] cleanup supervisor_pilot 29982 24450
[2025-10-12 07:02:45] 2025-10-12 11:02:45,121 [wrapper] Test setup, not cleaning
[2025-10-12 07:02:45] 2025-10-12 11:02:45,123 [wrapper] apfmon messages muted
[2025-10-12 07:02:45] 2025-10-12 11:02:45,125 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:02:45] 2025-10-12 11:02:45,127 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:02:45]  *** Error codes and diagnostics ***
[2025-10-12 07:02:45]     "exeErrorCode": 0,
[2025-10-12 07:02:45]     "exeErrorDiag": "",
[2025-10-12 07:02:45]     "pilotErrorCode": 0,
[2025-10-12 07:02:45]     "pilotErrorDiag": "",
[2025-10-12 07:02:45]  *** Listing of results directory ***
[2025-10-12 07:02:45] total 415236
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 23:17 queuedata.json
[2025-10-12 07:02:45] -rwx------ 1 boincer umatlas     36292 Oct 11 23:17 runpilot2-wrapper.sh
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas       100 Oct 12 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:02:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 04:17 run_atlas
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas       105 Oct 12 04:17 job.xml
[2025-10-12 07:02:45] -rw-r--r-- 2 boincer umatlas 220483396 Oct 12 04:17 EVNT.46676267._003216.pool.root.1
[2025-10-12 07:02:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:17 start_atlas.sh
[2025-10-12 07:02:45] drwxrwx--x 2 boincer umatlas      4096 Oct 12 04:17 shared
[2025-10-12 07:02:45] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 04:17 input.tar.gz
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas         0 Oct 12 04:17 boinc_lockfile
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 04:17 pandaJob.out
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas    975520 Oct 12 04:17 agis_schedconf.cvmfs.json
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas   1560580 Oct 12 04:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:02:45] drwx------ 5 boincer umatlas      4096 Oct 12 04:17 pilot3
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas      6034 Oct 12 07:01 init_data.xml
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas 197253517 Oct 12 07:01 HITS.46676269._070046.pool.root.1
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas       529 Oct 12 07:01 boinc_task_state.xml
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas      1047 Oct 12 07:01 memory_monitor_summary.json
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas    403629 Oct 12 07:01 log.46676269._070046.job.log.tgz.1
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas        95 Oct 12 07:02 pilot_heartbeat.json
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas      7830 Oct 12 07:02 heartbeat.json
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas        27 Oct 12 07:02 wrapper_checkpoint.txt
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 07:02 boinc_mmap_file
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas      5080 Oct 12 07:02 pilotlog.txt
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas   1378538 Oct 12 07:02 log.46676269._070046.job.log.1
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas       357 Oct 12 07:02 output.list
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas       620 Oct 12 07:02 runtime_log
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas   1802240 Oct 12 07:02 result.tar.gz
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas       656 Oct 12 07:02 xs4KDmRl1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmR5SMDmylApSo.diag
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 07:02 runtime_log.err
[2025-10-12 07:02:45] -rw-r--r-- 1 boincer umatlas     20913 Oct 12 07:02 stderr.txt
[2025-10-12 07:02:45] HITS file was successfully produced:
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas 197253517 Oct 12 07:01 shared/HITS.pool.root.1
[2025-10-12 07:02:45]  *** Contents of shared directory: ***
[2025-10-12 07:02:45] total 410288
[2025-10-12 07:02:45] -rw-r--r-- 2 boincer umatlas 220483396 Oct 12 04:17 ATLAS.root_0
[2025-10-12 07:02:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:17 start_atlas.sh
[2025-10-12 07:02:45] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 04:17 input.tar.gz
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas 197253517 Oct 12 07:01 HITS.pool.root.1
[2025-10-12 07:02:45] -rw------- 1 boincer umatlas   1802240 Oct 12 07:02 result.tar.gz
07:02:47 (20048): run_atlas exited; CPU time 74663.278645
07:02:47 (20048): called boinc_finish(0)

</stderr_txt>
]]>

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