Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:11:52 (2909810): wrapper (7.7.26015): starting
20:11:52 (2909810): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 20:11:52] Arguments: --nthreads 3
[2025-10-12 20:11:52] Threads: 3
[2025-10-12 20:11:52] Checking for CVMFS
[2025-10-12 20:11:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:11:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:11:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:11:52] 2.9.2.0 1532479 4481 84752 151631 3 56 29957170 36864001 0 130560 0 3610156 99.991 158770 874 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 20:11:52] CVMFS is ok
[2025-10-12 20:11:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:11:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:11:52] Further information can be found at the LHC@home message board.
[2025-10-12 20:11:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:11:52] Checking for apptainer binary...
[2025-10-12 20:11:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:11:52] Running /usr/bin/apptainer --version
[2025-10-12 20:11:52] apptainer version 1.4.1-1.1
[2025-10-12 20:11:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:11:52] magicA161
[2025-10-12 20:11:52] apptainer works
[2025-10-12 20:11:52] Set ATHENA_PROC_NUMBER=3
[2025-10-12 20:11:52] Set ATHENA_CORE_NUMBER=3
[2025-10-12 20:11:52] Starting ATLAS job with PandaID=6839164524
[2025-10-12 20:11:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:36:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:36:09] 2025-10-12 19:35:37,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:36:09] 2025-10-12 19:35:37,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:36:09] 2025-10-12 19:35:37,747 | INFO     | aborting loop
[2025-10-12 21:36:09] 2025-10-12 19:35:37,864 | INFO     | all data control threads have been joined
[2025-10-12 21:36:09] 2025-10-12 19:35:38,060 | INFO     | all job control threads have been joined
[2025-10-12 21:36:09] 2025-10-12 19:35:38,401 | INFO     | all payload control threads have been joined
[2025-10-12 21:36:09] 2025-10-12 19:35:38,708 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:38,710 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:38,752 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:38,870 | INFO     | [data] control thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:38,941 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,066 | INFO     | [job] control thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:36:09] 2025-10-12 19:35:39,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:36:09] 2025-10-12 19:35:39,278 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,407 | INFO     | [payload] control thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,467 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,789 | INFO     | [job] validate thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,889 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:39,942 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:40,018 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:41,142 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:43,166 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:35:48,195 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:36:09] 2025-10-12 19:35:49,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:36:09] 2025-10-12 19:36:03,628 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:36:09] 2025-10-12 19:36:04,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118698534720)>', '<ExcThread(monitor, started 140117536667392)>']
[2025-10-12 21:36:09] 2025-10-12 19:36:07,227 | INFO     | PID=2913538 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:36:09] 2025-10-12 19:36:07,227 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:36:09] 2025-10-12 19:36:07,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:36:09] 2025-10-12 19:36:07,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:36:09] 2025-10-12 19:36:07,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:36:09] 2025-10-12 19:36:07,227 | INFO     | [monitor] control thread has ended
[2025-10-12 21:36:09] 2025-10-12 19:36:09,396 | INFO     | all workflow threads have been joined
[2025-10-12 21:36:09] 2025-10-12 19:36:09,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:36:09] 2025-10-12 19:36:09,397 | INFO     | traces error code: 0
[2025-10-12 21:36:09] 2025-10-12 19:36:09,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:36:09] 2025-10-12 19:36:09,449 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:36:09] 2025-10-12 19:36:09,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:36:09] 2025-10-12 19:36:09,454 [wrapper] pilotpid: 2913538
[2025-10-12 21:36:09] 2025-10-12 19:36:09,456 [wrapper] Pilot exit status: 0
[2025-10-12 21:36:09] 2025-10-12 19:36:09,464 [wrapper] pandaids: 6839164524
[2025-10-12 21:36:09] 2025-10-12 19:36:09,481 [wrapper] cleanup supervisor_pilot 2932455 2913539
[2025-10-12 21:36:09] 2025-10-12 19:36:09,483 [wrapper] Test setup, not cleaning
[2025-10-12 21:36:09] 2025-10-12 19:36:09,486 [wrapper] apfmon messages muted
[2025-10-12 21:36:09] 2025-10-12 19:36:09,488 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:36:09] 2025-10-12 19:36:09,491 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:36:09]  *** Error codes and diagnostics ***
[2025-10-12 21:36:09]     "exeErrorCode": 0,
[2025-10-12 21:36:09]     "exeErrorDiag": "",
[2025-10-12 21:36:09]     "pilotErrorCode": 0,
[2025-10-12 21:36:09]     "pilotErrorDiag": "",
[2025-10-12 21:36:09]  *** Listing of results directory ***
[2025-10-12 21:36:09] total 419980
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-12 21:36:09] -rwx------ 1 boinc boinc     36292 Oct 12 02:43 runpilot2-wrapper.sh
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:43 queuedata.json
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:36:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:11 run_atlas
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:11 job.xml
[2025-10-12 21:36:09] -rw-r--r-- 2 boinc boinc 224538319 Oct 12 20:11 EVNT.46676267._003109.pool.root.1
[2025-10-12 21:36:09] -rw-r--r-- 2 boinc boinc    576704 Oct 12 20:11 input.tar.gz
[2025-10-12 21:36:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 21:36:09] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:11 shared
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:11 boinc_setup_complete
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc      6449 Oct 12 20:11 init_data.xml
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:11 boinc_lockfile
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:11 pandaJob.out
[2025-10-12 21:36:09] -rw------- 1 boinc boinc    975528 Oct 12 20:11 agis_schedconf.cvmfs.json
[2025-10-12 21:36:09] -rw------- 1 boinc boinc   1560580 Oct 12 20:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:36:09] drwx------ 4 boinc boinc      4096 Oct 12 20:11 pilot3
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:35 boinc_task_state.xml
[2025-10-12 21:36:09] -rw------- 1 boinc boinc 199639017 Oct 12 21:35 HITS.46676269._068015.pool.root.1
[2025-10-12 21:36:09] -rw------- 1 boinc boinc        95 Oct 12 21:35 pilot_heartbeat.json
[2025-10-12 21:36:09] -rw------- 1 boinc boinc      1017 Oct 12 21:35 memory_monitor_summary.json
[2025-10-12 21:36:09] -rw------- 1 boinc boinc    258398 Oct 12 21:35 log.46676269._068015.job.log.tgz.1
[2025-10-12 21:36:09] -rw------- 1 boinc boinc      7756 Oct 12 21:35 heartbeat.json
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:36 wrapper_checkpoint.txt
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:36 boinc_mmap_file
[2025-10-12 21:36:09] -rw------- 1 boinc boinc      4824 Oct 12 21:36 pilotlog.txt
[2025-10-12 21:36:09] -rw------- 1 boinc boinc    732516 Oct 12 21:36 log.46676269._068015.job.log.1
[2025-10-12 21:36:09] -rw------- 1 boinc boinc       357 Oct 12 21:36 output.list
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:36 runtime_log
[2025-10-12 21:36:09] -rw------- 1 boinc boinc   1013760 Oct 12 21:36 result.tar.gz
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc      8792 Oct 12 21:36 runtime_log.err
[2025-10-12 21:36:09] -rw------- 1 boinc boinc       661 Oct 12 21:36 cOEMDm5LzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma7hNDm267GUo.diag
[2025-10-12 21:36:09] -rw-r--r-- 1 boinc boinc      7291 Oct 12 21:36 stderr.txt
[2025-10-12 21:36:09] HITS file was successfully produced:
[2025-10-12 21:36:09] -rw------- 1 boinc boinc 199639017 Oct 12 21:35 shared/HITS.pool.root.1
[2025-10-12 21:36:09]  *** Contents of shared directory: ***
[2025-10-12 21:36:09] total 415816
[2025-10-12 21:36:09] -rw-r--r-- 2 boinc boinc 224538319 Oct 12 20:11 ATLAS.root_0
[2025-10-12 21:36:09] -rw-r--r-- 2 boinc boinc    576704 Oct 12 20:11 input.tar.gz
[2025-10-12 21:36:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 21:36:09] -rw------- 1 boinc boinc 199639017 Oct 12 21:35 HITS.pool.root.1
[2025-10-12 21:36:09] -rw------- 1 boinc boinc   1013760 Oct 12 21:36 result.tar.gz
21:36:11 (2909810): run_atlas exited; CPU time 14388.048805
21:36:11 (2909810): called boinc_finish(0)

</stderr_txt>
]]>

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