Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:40 (3466131): wrapper (7.7.26015): starting
05:06:40 (3466131): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:06:40] Arguments: --nthreads 8
[2025-10-12 05:06:40] Threads: 8
[2025-10-12 05:06:40] Checking for CVMFS
[2025-10-12 05:06:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:06:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:06:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:06:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:06:41] 2.13.2.0 864990 129042 395568 151613 2 301 32208360 40960000 20481 16776704 0 190087953 99.687 163427729 30834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 05:06:41] CVMFS is ok
[2025-10-12 05:06:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:06:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:06:41] Further information can be found at the LHC@home message board.
[2025-10-12 05:06:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:06:41] Checking for apptainer binary...
[2025-10-12 05:06:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:06:41] Running /usr/bin/apptainer --version
[2025-10-12 05:06:42] apptainer version 1.4.3-1.el9
[2025-10-12 05:06:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:06:42] c6-5-37-3.aglt2.org
[2025-10-12 05:06:42] apptainer works
[2025-10-12 05:06:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:06:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:06:42] Starting ATLAS job with PandaID=6839162100
[2025-10-12 05:06:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:25:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:25:40] 2025-10-12 13:24:55,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:25:40] 2025-10-12 13:24:55,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:25:40] 2025-10-12 13:24:55,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:25:40] 2025-10-12 13:24:55,600 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:25:40] 2025-10-12 13:24:55,601 | INFO     | sum of square deviations: 4903677237.91237
[2025-10-12 09:25:40] 2025-10-12 13:24:55,602 | INFO     | sum of deviations: 35901921954.58166
[2025-10-12 09:25:40] 2025-10-12 13:24:55,602 | INFO     | mean x: 1760267767.4422312
[2025-10-12 09:25:40] 2025-10-12 13:24:55,638 | INFO     | mean y: 2130635.247011952
[2025-10-12 09:25:40] 2025-10-12 13:24:55,638 | INFO     | -- intersect: -12885543846.522385
[2025-10-12 09:25:40] 2025-10-12 13:24:55,638 | INFO     | intersect: -12885543846.522385
[2025-10-12 09:25:40] 2025-10-12 13:24:55,638 | INFO     | chi2: 2.5353769015710816
[2025-10-12 09:25:40] 2025-10-12 13:24:55,639 | INFO     | sum of square deviations: 4616416798.959387
[2025-10-12 09:25:40] 2025-10-12 13:24:55,640 | INFO     | sum of deviations: 51573740848.6992
[2025-10-12 09:25:40] 2025-10-12 13:24:55,640 | INFO     | mean x: 1760267614.9349594
[2025-10-12 09:25:40] 2025-10-12 13:24:55,640 | INFO     | mean y: 2138846.9186991868
[2025-10-12 09:25:40] 2025-10-12 13:24:55,640 | INFO     | -- intersect: -19663240114.850414
[2025-10-12 09:25:40] 2025-10-12 13:24:55,640 | INFO     | intersect: -19663240114.850414
[2025-10-12 09:25:40] 2025-10-12 13:24:55,641 | INFO     | chi2: 1.8493731784953487
[2025-10-12 09:25:40] 2025-10-12 13:24:55,641 | INFO     | current chi2=1.8493731784953487 (change=27.057268000297757 %)
[2025-10-12 09:25:40] 2025-10-12 13:24:55,641 | INFO     | sum of square deviations: 4340553286.506245
[2025-10-12 09:25:40] 2025-10-12 13:24:55,683 | INFO     | sum of deviations: 50902769802.771774
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | mean x: 1760267462.4149377
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | mean y: 2138467.4522821577
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | -- intersect: -20640964730.743618
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | intersect: -20640964730.743618
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | chi2: 1.8457154734481174
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | current chi2=1.8457154734481174 (change=0.19778079890869818 %)
[2025-10-12 09:25:40] 2025-10-12 13:24:55,684 | INFO     | right removable region: 240
[2025-10-12 09:25:40] 2025-10-12 13:24:55,685 | INFO     | sum of square deviations: 4616410089.414609
[2025-10-12 09:25:40] 2025-10-12 13:24:55,686 | INFO     | sum of deviations: -3976858283.4878044
[2025-10-12 09:25:40] 2025-10-12 13:24:55,686 | INFO     | mean x: 1760267919.9512196
[2025-10-12 09:25:40] 2025-10-12 13:24:55,686 | INFO     | mean y: 2151681.4593495936
[2025-10-12 09:25:40] 2025-10-12 13:24:55,686 | INFO     | -- intersect: 1518554237.3474343
[2025-10-12 09:25:40] 2025-10-12 13:24:55,686 | INFO     | intersect: 1518554237.3474343
[2025-10-12 09:25:40] 2025-10-12 13:24:55,726 | INFO     | chi2: 0.9226412881512274
[2025-10-12 09:25:40] 2025-10-12 13:24:55,726 | INFO     | current chi2=0.9226412881512274 (change=63.609304495142325 %)
[2025-10-12 09:25:40] 2025-10-12 13:24:55,726 | INFO     | sum of square deviations: 4340599777.792515
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | sum of deviations: -13432410662.746885
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | mean x: 1760268072.4564316
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | mean y: 2156885.643153527
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | -- intersect: 5449478646.734327
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | intersect: 5449478646.734327
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | chi2: 0.8128647725045602
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | current chi2=0.8128647725045602 (change=11.898071011610092 %)
[2025-10-12 09:25:40] 2025-10-12 13:24:55,728 | INFO     | left removable region: 20
[2025-10-12 09:25:40] 2025-10-12 13:24:55,729 | INFO     | sum of square deviations: 3301842659.1090918
[2025-10-12 09:25:40] 2025-10-12 13:24:55,763 | INFO     | sum of deviations: 3682137705.1727285
[2025-10-12 09:25:40] 2025-10-12 13:24:55,763 | INFO     | mean x: 1760268041.9363637
[2025-10-12 09:25:40] 2025-10-12 13:24:55,763 | INFO     | mean y: 2165308.440909091
[2025-10-12 09:25:40] 2025-10-12 13:24:55,763 | INFO     | -- intersect: -1960844440.2347944
[2025-10-12 09:25:40] 2025-10-12 13:24:55,763 | INFO     | intersect: -1960844440.2347944
[2025-10-12 09:25:40] 2025-10-12 13:24:55,764 | INFO     | chi2: 0.10629866508277581
[2025-10-12 09:25:40] 2025-10-12 13:24:55,764 | INFO     | -- intersect: -1960844440.2347944
[2025-10-12 09:25:40] 2025-10-12 13:24:55,764 | INFO     | current memory leak: 1.12 B/s (using 220 data points, chi2=0.11)
[2025-10-12 09:25:40] 2025-10-12 13:24:55,764 | INFO     | could have reported an average CPU frequency of 2874 MHz (12 samples)
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | ..............................
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . Timing measurements:
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . get job = 0 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . initial setup = 3 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . payload setup = 41 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . stage-in = 0 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . payload execution = 15320 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . stage-out = 5 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | . log creation = 0 s
[2025-10-12 09:25:40] 2025-10-12 13:24:55,765 | INFO     | ..............................
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | 
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | job summary report
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | --------------------------------------------------
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | PanDA job id: 6839162100
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | task id: 46676269
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | errors: (none)
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | pilot state: finished 
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | transexitcode: 0
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | exeerrorcode: 0
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | exeerrordiag: 
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | exitcode: 0
[2025-10-12 09:25:40] 2025-10-12 13:24:56,524 | INFO     | exitmsg: OK
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | cpuconsumptiontime: 39784 s
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | nevents: 400
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | neventsw: 0
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | pid: 3483698
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | pgrp: 3483698
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | corecount: 8
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | event service: False
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | sizes: {0: 2348567, 1: 2348651, 2: 2348850, 13: 2348850, 18: 2349168, 24: 2349196, 15368: 2380217, 15376: 2389215, 15377: 2389271, 15414: 2389465}
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | --------------------------------------------------
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | 
[2025-10-12 09:25:40] 2025-10-12 13:24:56,525 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:25:40] 2025-10-12 13:24:56,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | job 6839162100 has completed (purged errors)
[2025-10-12 09:25:40] 2025-10-12 13:24:56,693 | INFO     | overall cleanup function is called
[2025-10-12 09:25:40] 2025-10-12 13:24:57,739 | INFO     | --- collectZombieJob: --- 10, [3483698]
[2025-10-12 09:25:40] 2025-10-12 13:24:57,739 | INFO     | zombie collector waiting for pid 3483698
[2025-10-12 09:25:40] 2025-10-12 13:24:57,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:25:40] 2025-10-12 13:24:57,739 | INFO     | collected zombie processes
[2025-10-12 09:25:40] 2025-10-12 13:24:57,739 | INFO     | will attempt to kill all subprocesses of pid=3483698
[2025-10-12 09:25:40] 2025-10-12 13:24:59,828 | INFO     | process IDs to be killed: [3483698] (in reverse order)
[2025-10-12 09:25:40] 2025-10-12 13:25:00,345 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:25:40] 2025-10-12 13:25:00,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:25:40] 2025-10-12 13:25:00,370 | INFO     | did not find any defunct processes belonging to 3483698
[2025-10-12 09:25:40] 2025-10-12 13:25:00,394 | INFO     | did not find any defunct processes belonging to 3483698
[2025-10-12 09:25:40] 2025-10-12 13:25:00,394 | INFO     | ready for new job
[2025-10-12 09:25:40] 2025-10-12 13:25:00,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:25:40] 2025-10-12 13:25:00,396 | INFO     | ***************************************
[2025-10-12 09:25:40] 2025-10-12 13:25:00,396 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:25:40] 2025-10-12 13:25:00,401 | INFO     | ***************************************
[2025-10-12 09:25:40] 2025-10-12 13:25:00,401 | INFO     | 
[2025-10-12 09:25:40] 2025-10-12 13:25:00,418 | INFO     | architecture information:
[2025-10-12 09:25:40] 2025-10-12 13:25:00,422 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:25:40] 2025-10-12 13:25:00,570 | INFO     | cat /etc/os-release:
[2025-10-12 09:25:40] NAME="CentOS Linux"
[2025-10-12 09:25:40] VERSION="7 (Core)"
[2025-10-12 09:25:40] ID="centos"
[2025-10-12 09:25:40] ID_LIKE="rhel fedora"
[2025-10-12 09:25:40] VERSION_ID="7"
[2025-10-12 09:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:25:40] ANSI_COLOR="0;31"
[2025-10-12 09:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:25:40] HOME_URL="https://www.centos.org/"
[2025-10-12 09:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:25:40] 
[2025-10-12 09:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:25:40] 
[2025-10-12 09:25:40] 2025-10-12 13:25:00,570 | INFO     | ***************************************
[2025-10-12 09:25:40] 2025-10-12 13:25:01,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:25:40] 2025-10-12 13:25:01,167 | INFO     | sufficient remaining disk space (74113351680 B)
[2025-10-12 09:25:40] 2025-10-12 13:25:01,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:25:40] 2025-10-12 13:25:01,168 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:25:40] 2025-10-12 13:25:01,168 | INFO     | update_server=False
[2025-10-12 09:25:40] 2025-10-12 13:25:01,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:25:40] 2025-10-12 13:25:01,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:25:40] 2025-10-12 13:25:01,169 | INFO     | aborting loop
[2025-10-12 09:25:40] 2025-10-12 13:25:01,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:25:40] 2025-10-12 13:25:01,658 | INFO     | all data control threads have been joined
[2025-10-12 09:25:40] 2025-10-12 13:25:01,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:25:40] 2025-10-12 13:25:01,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:25:40] 2025-10-12 13:25:02,174 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,175 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,267 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,558 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,592 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,592 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,663 | INFO     | [data] control thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:02,671 | INFO     | all payload control threads have been joined
[2025-10-12 09:25:40] 2025-10-12 13:25:02,872 | INFO     | all job control threads have been joined
[2025-10-12 09:25:40] 2025-10-12 13:25:03,217 | INFO     | [job] validate thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,223 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,231 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,298 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,514 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,681 | INFO     | [payload] control thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,727 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:03,880 | INFO     | [job] control thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:05,847 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:25:40] 2025-10-12 13:25:31,510 | INFO     | PID=3469823 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:25:40] 2025-10-12 13:25:31,510 | INFO     | .. there are 23 such processes running
[2025-10-12 09:25:40] 2025-10-12 13:25:31,515 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:25:40] 2025-10-12 13:25:31,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:25:40] 2025-10-12 13:25:31,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:25:40] 2025-10-12 13:25:32,187 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:25:40] 2025-10-12 13:25:33,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850803201856)>', '<ExcThread(monitor, started 139849990379264)>']
[2025-10-12 09:25:40] 2025-10-12 13:25:34,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:25:40] 2025-10-12 13:25:34,537 | INFO     | [monitor] control thread has ended
[2025-10-12 09:25:40] 2025-10-12 13:25:39,014 | INFO     | all workflow threads have been joined
[2025-10-12 09:25:40] 2025-10-12 13:25:39,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:25:40] 2025-10-12 13:25:39,014 | INFO     | traces error code: 0
[2025-10-12 09:25:40] 2025-10-12 13:25:39,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:25:40] 2025-10-12 13:25:39,434 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:25:40] 2025-10-12 13:25:39,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:25:40] 2025-10-12 13:25:39,492 [wrapper] pilotpid: 3469823
[2025-10-12 09:25:40] 2025-10-12 13:25:39,514 [wrapper] Pilot exit status: 0
[2025-10-12 09:25:40] 2025-10-12 13:25:39,704 [wrapper] pandaids: 6839162100
[2025-10-12 09:25:40] 2025-10-12 13:25:39,929 [wrapper] cleanup supervisor_pilot 4133250 3469824
[2025-10-12 09:25:40] 2025-10-12 13:25:39,983 [wrapper] Test setup, not cleaning
[2025-10-12 09:25:40] 2025-10-12 13:25:40,003 [wrapper] apfmon messages muted
[2025-10-12 09:25:40] 2025-10-12 13:25:40,042 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:25:40] 2025-10-12 13:25:40,125 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:25:40]  *** Error codes and diagnostics ***
[2025-10-12 09:25:40]     "exeErrorCode": 0,
[2025-10-12 09:25:40]     "exeErrorDiag": "",
[2025-10-12 09:25:40]     "pilotErrorCode": 0,
[2025-10-12 09:25:40]     "pilotErrorDiag": "",
[2025-10-12 09:25:40]  *** Listing of results directory ***
[2025-10-12 09:25:40] total 410096
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:05 queuedata.json
[2025-10-12 09:25:40] -rwx------. 1 boincer umatlas     36292 Oct 11 19:06 runpilot2-wrapper.sh
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:25:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:06 run_atlas
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:06 job.xml
[2025-10-12 09:25:40] -rw-r--r--. 2 boincer umatlas 219862656 Oct 12 05:06 EVNT.46676267._000040.pool.root.1
[2025-10-12 09:25:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:06 start_atlas.sh
[2025-10-12 09:25:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:06 shared
[2025-10-12 09:25:40] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 05:06 input.tar.gz
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:06 boinc_lockfile
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas      2543 Oct 12 05:06 pandaJob.out
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas    975520 Oct 12 05:07 agis_schedconf.cvmfs.json
[2025-10-12 09:25:40] drwx------. 5 boincer umatlas      4096 Oct 12 05:07 pilot3
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 09:18 init_data.xml
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas 191374433 Oct 12 09:22 HITS.46676269._066707.pool.root.1
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas       530 Oct 12 09:22 boinc_task_state.xml
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas      1055 Oct 12 09:24 memory_monitor_summary.json
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas    462062 Oct 12 09:24 log.46676269._066707.job.log.tgz.1
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas      7825 Oct 12 09:24 heartbeat.json
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas        95 Oct 12 09:25 pilot_heartbeat.json
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas      4824 Oct 12 09:25 pilotlog.txt
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas   1936126 Oct 12 09:25 log.46676269._066707.job.log.1
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:25 boinc_mmap_file
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:25 wrapper_checkpoint.txt
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas       357 Oct 12 09:25 output.list
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:25 runtime_log
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas   2416640 Oct 12 09:25 result.tar.gz
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 09:25 runtime_log.err
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas       657 Oct 12 09:25 bYHODmIqxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVlSMDmsdnDfm.diag
[2025-10-12 09:25:40] -rw-r--r--. 1 boincer umatlas     21027 Oct 12 09:25 stderr.txt
[2025-10-12 09:25:40] HITS file was successfully produced:
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas 191374433 Oct 12 09:22 shared/HITS.pool.root.1
[2025-10-12 09:25:40]  *** Contents of shared directory: ***
[2025-10-12 09:25:40] total 404548
[2025-10-12 09:25:40] -rw-r--r--. 2 boincer umatlas 219862656 Oct 12 05:06 ATLAS.root_0
[2025-10-12 09:25:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:06 start_atlas.sh
[2025-10-12 09:25:40] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 05:06 input.tar.gz
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas 191374433 Oct 12 09:22 HITS.pool.root.1
[2025-10-12 09:25:40] -rw-------. 1 boincer umatlas   2416640 Oct 12 09:25 result.tar.gz
09:25:42 (3466131): run_atlas exited; CPU time 40196.607305
09:25:42 (3466131): called boinc_finish(0)

</stderr_txt>
]]>

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