Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:40:56 (3099471): wrapper (7.7.26015): starting
18:40:56 (3099471): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:40:56] Arguments: --nthreads 3
[2025-10-12 18:40:56] Threads: 3
[2025-10-12 18:40:56] Checking for CVMFS
[2025-10-12 18:40:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:40:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:40:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:40:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:40:57] 2.9.2.0 1694695 4601 84204 151627 1 57 29963105 36864000 0 130560 0 3681586 99.991 158787 1022 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:40:57] CVMFS is ok
[2025-10-12 18:40:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:40:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:40:57] Further information can be found at the LHC@home message board.
[2025-10-12 18:40:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:40:57] Checking for apptainer binary...
[2025-10-12 18:40:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:40:57] Running /usr/bin/apptainer --version
[2025-10-12 18:40:57] apptainer version 1.4.1-1.1
[2025-10-12 18:40:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:40:57] thA312a
[2025-10-12 18:40:57] apptainer works
[2025-10-12 18:40:57] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:40:57] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:40:57] Starting ATLAS job with PandaID=6839319372
[2025-10-12 18:40:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:59:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:59:25] 
[2025-10-12 19:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:59:25] 
[2025-10-12 19:59:25] 2025-10-12 17:58:54,562 | INFO     | ***************************************
[2025-10-12 19:59:25] 2025-10-12 17:58:55,065 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 19:59:25] 2025-10-12 17:58:55,078 | INFO     | sufficient remaining disk space (274602131456 B)
[2025-10-12 19:59:25] 2025-10-12 17:58:55,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:59:25] 2025-10-12 17:58:55,078 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:59:25] 2025-10-12 17:58:55,078 | INFO     | update_server=False
[2025-10-12 19:59:25] 2025-10-12 17:58:55,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:59:25] 2025-10-12 17:58:55,258 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:59:25] 2025-10-12 17:58:55,258 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:59:25] 2025-10-12 17:58:55,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:59:25] 2025-10-12 17:58:55,258 | INFO     | will abort loop
[2025-10-12 19:59:25] 2025-10-12 17:58:55,384 | INFO     | all payload control threads have been joined
[2025-10-12 19:59:25] 2025-10-12 17:58:55,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:59:25] 2025-10-12 17:58:55,874 | INFO     | all data control threads have been joined
[2025-10-12 19:59:25] 2025-10-12 17:58:56,084 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,085 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,136 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,263 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:59:25] 2025-10-12 17:58:56,390 | INFO     | [payload] control thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,442 | INFO     | all job control threads have been joined
[2025-10-12 19:59:25] 2025-10-12 17:58:56,643 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,879 | INFO     | [data] control thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:56,963 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:57,237 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:57,447 | INFO     | [job] control thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:57,464 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:57,501 | INFO     | [job] validate thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:57,580 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:58:57,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:59:25] 2025-10-12 17:58:58,986 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:59:00,381 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:59:06,035 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:59:25] 2025-10-12 17:59:07,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:59:25] 2025-10-12 17:59:08,625 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:59:25] 2025-10-12 17:59:09,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744894740288)>', '<ExcThread(monitor, started 139744235202304)>']
[2025-10-12 19:59:25] 2025-10-12 17:59:14,495 | INFO     | all workflow threads have been joined
[2025-10-12 19:59:25] 2025-10-12 17:59:14,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:59:25] 2025-10-12 17:59:14,495 | INFO     | traces error code: 0
[2025-10-12 19:59:25] 2025-10-12 17:59:14,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:59:25] 2025-10-12 17:59:25,815 | INFO     | PID=3103191 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:59:25] 2025-10-12 17:59:25,816 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:59:25] 2025-10-12 17:59:25,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:59:25] 2025-10-12 17:59:25,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:59:25] 2025-10-12 17:59:25,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:59:25] 2025-10-12 17:59:25,816 | INFO     | [monitor] control thread has ended
[2025-10-12 19:59:25] 2025-10-12 17:59:25,862 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:59:25] 2025-10-12 17:59:25,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:59:25] 2025-10-12 17:59:25,868 [wrapper] pilotpid: 3103191
[2025-10-12 19:59:25] 2025-10-12 17:59:25,870 [wrapper] Pilot exit status: 0
[2025-10-12 19:59:25] 2025-10-12 17:59:25,877 [wrapper] pandaids: 6839319372
[2025-10-12 19:59:25] 2025-10-12 17:59:25,894 [wrapper] cleanup supervisor_pilot 3121793 3103192
[2025-10-12 19:59:25] 2025-10-12 17:59:25,897 [wrapper] Test setup, not cleaning
[2025-10-12 19:59:25] 2025-10-12 17:59:25,899 [wrapper] apfmon messages muted
[2025-10-12 19:59:25] 2025-10-12 17:59:25,902 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:59:25] 2025-10-12 17:59:25,904 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:59:25]  *** Error codes and diagnostics ***
[2025-10-12 19:59:25]     "exeErrorCode": 0,
[2025-10-12 19:59:25]     "exeErrorDiag": "",
[2025-10-12 19:59:25]     "pilotErrorCode": 0,
[2025-10-12 19:59:25]     "pilotErrorDiag": "",
[2025-10-12 19:59:25]  *** Listing of results directory ***
[2025-10-12 19:59:25] total 402596
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:18 pilot3.tar.gz
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:20 queuedata.json
[2025-10-12 19:59:25] -rwx------ 1 boinc boinc     36292 Oct 12 05:21 runpilot2-wrapper.sh
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:59:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:40 run_atlas
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:40 job.xml
[2025-10-12 19:59:25] -rw-r--r-- 2 boinc boinc 220528641 Oct 12 18:40 EVNT.46676267._003217.pool.root.1
[2025-10-12 19:59:25] -rw-r--r-- 2 boinc boinc    569682 Oct 12 18:40 input.tar.gz
[2025-10-12 19:59:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:40 start_atlas.sh
[2025-10-12 19:59:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:40 shared
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:40 boinc_setup_complete
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc      6447 Oct 12 18:40 init_data.xml
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:40 boinc_lockfile
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:40 pandaJob.out
[2025-10-12 19:59:25] -rw------- 1 boinc boinc    975528 Oct 12 18:41 agis_schedconf.cvmfs.json
[2025-10-12 19:59:25] -rw------- 1 boinc boinc   1560580 Oct 12 18:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:59:25] drwx------ 5 boinc boinc      4096 Oct 12 18:41 pilot3
[2025-10-12 19:59:25] -rw------- 1 boinc boinc 185947230 Oct 12 19:58 HITS.46676269._070074.pool.root.1
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:58 boinc_task_state.xml
[2025-10-12 19:59:25] -rw------- 1 boinc boinc      1016 Oct 12 19:58 memory_monitor_summary.json
[2025-10-12 19:59:25] -rw------- 1 boinc boinc    255130 Oct 12 19:58 log.46676269._070074.job.log.tgz.1
[2025-10-12 19:59:25] -rw------- 1 boinc boinc      7754 Oct 12 19:58 heartbeat.json
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:59 wrapper_checkpoint.txt
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:59 boinc_mmap_file
[2025-10-12 19:59:25] -rw------- 1 boinc boinc       747 Oct 12 19:59 pilotlog.txt
[2025-10-12 19:59:25] -rw------- 1 boinc boinc        95 Oct 12 19:59 pilot_heartbeat.json
[2025-10-12 19:59:25] -rw------- 1 boinc boinc    690317 Oct 12 19:59 log.46676269._070074.job.log.1
[2025-10-12 19:59:25] -rw------- 1 boinc boinc       357 Oct 12 19:59 output.list
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:59 runtime_log
[2025-10-12 19:59:25] -rw------- 1 boinc boinc    962560 Oct 12 19:59 result.tar.gz
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc      8782 Oct 12 19:59 runtime_log.err
[2025-10-12 19:59:25] -rw------- 1 boinc boinc       659 Oct 12 19:59 VjWKDmHp1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGTiNDmR6ANWn.diag
[2025-10-12 19:59:25] -rw-r--r-- 1 boinc boinc      8623 Oct 12 19:59 stderr.txt
[2025-10-12 19:59:25] HITS file was successfully produced:
[2025-10-12 19:59:25] -rw------- 1 boinc boinc 185947230 Oct 12 19:58 shared/HITS.pool.root.1
[2025-10-12 19:59:25]  *** Contents of shared directory: ***
[2025-10-12 19:59:25] total 398480
[2025-10-12 19:59:25] -rw-r--r-- 2 boinc boinc 220528641 Oct 12 18:40 ATLAS.root_0
[2025-10-12 19:59:25] -rw-r--r-- 2 boinc boinc    569682 Oct 12 18:40 input.tar.gz
[2025-10-12 19:59:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:40 start_atlas.sh
[2025-10-12 19:59:25] -rw------- 1 boinc boinc 185947230 Oct 12 19:58 HITS.pool.root.1
[2025-10-12 19:59:25] -rw------- 1 boinc boinc    962560 Oct 12 19:59 result.tar.gz
19:59:27 (3099471): run_atlas exited; CPU time 13357.131049
19:59:27 (3099471): called boinc_finish(0)

</stderr_txt>
]]>

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