Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:53:35 (3297097): wrapper (7.7.26015): starting
19:53:35 (3297097): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 19:53:35] Arguments: --nthreads 3
[2025-10-12 19:53:35] Threads: 3
[2025-10-12 19:53:35] Checking for CVMFS
[2025-10-12 19:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:53:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:53:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:53:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:53:35] 2.9.2.0 1855376 4678 87036 151630 1 56 25908145 36864001 0 130560 0 3806392 99.991 160091 765 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:53:35] CVMFS is ok
[2025-10-12 19:53:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:53:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:53:35] Further information can be found at the LHC@home message board.
[2025-10-12 19:53:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:53:35] Checking for apptainer binary...
[2025-10-12 19:53:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:53:35] Running /usr/bin/apptainer --version
[2025-10-12 19:53:35] apptainer version 1.4.1-1.1
[2025-10-12 19:53:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:53:35] thA331b
[2025-10-12 19:53:35] apptainer works
[2025-10-12 19:53:35] Set ATHENA_PROC_NUMBER=3
[2025-10-12 19:53:35] Set ATHENA_CORE_NUMBER=3
[2025-10-12 19:53:35] Starting ATLAS job with PandaID=6839317588
[2025-10-12 19:53:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:16:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:16:52] 2025-10-12 19:15:48,369 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 21:16:52] 2025-10-12 19:15:48,382 | INFO     | sufficient remaining disk space (233679355904 B)
[2025-10-12 21:16:52] 2025-10-12 19:15:48,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:16:52] 2025-10-12 19:15:48,382 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:16:52] 2025-10-12 19:15:48,382 | INFO     | update_server=False
[2025-10-12 21:16:52] 2025-10-12 19:15:48,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:16:52] 2025-10-12 19:15:48,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:16:52] 2025-10-12 19:15:48,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:16:52] 2025-10-12 19:15:48,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:16:52] 2025-10-12 19:15:48,438 | INFO     | aborting loop
[2025-10-12 21:16:52] 2025-10-12 19:15:48,454 | INFO     | all data control threads have been joined
[2025-10-12 21:16:52] 2025-10-12 19:15:48,785 | INFO     | all payload control threads have been joined
[2025-10-12 21:16:52] 2025-10-12 19:15:49,388 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,388 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,405 | INFO     | [job] validate thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,422 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,444 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,460 | INFO     | [data] control thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,548 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,698 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,786 | INFO     | [payload] control thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:49,908 | INFO     | all job control threads have been joined
[2025-10-12 21:16:52] 2025-10-12 19:15:50,024 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:50,293 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:50,423 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:50,656 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:50,914 | INFO     | [job] control thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:51,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:16:52] 2025-10-12 19:15:55,024 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:15:58,474 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:16:52] 2025-10-12 19:15:59,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:16:52] 2025-10-12 19:16:18,593 | INFO     | PID=3300816 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:16:52] 2025-10-12 19:16:18,594 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:16:52] 2025-10-12 19:16:18,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:16:52] 2025-10-12 19:16:18,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:16:52] 2025-10-12 19:16:46,642 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:16:52] 2025-10-12 19:16:47,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219944060736)>', '<ExcThread(monitor, started 140218871052032)>']
[2025-10-12 21:16:52] 2025-10-12 19:16:47,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:16:52] 2025-10-12 19:16:47,743 | INFO     | [monitor] control thread has ended
[2025-10-12 21:16:52] 2025-10-12 19:16:52,496 | INFO     | all workflow threads have been joined
[2025-10-12 21:16:52] 2025-10-12 19:16:52,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:16:52] 2025-10-12 19:16:52,496 | INFO     | traces error code: 0
[2025-10-12 21:16:52] 2025-10-12 19:16:52,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:16:52] 2025-10-12 19:16:52,546 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:16:52] 2025-10-12 19:16:52,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:16:52] 2025-10-12 19:16:52,551 [wrapper] pilotpid: 3300816
[2025-10-12 21:16:52] 2025-10-12 19:16:52,553 [wrapper] Pilot exit status: 0
[2025-10-12 21:16:52] 2025-10-12 19:16:52,560 [wrapper] pandaids: 6839317588
[2025-10-12 21:16:52] 2025-10-12 19:16:52,576 [wrapper] cleanup supervisor_pilot 3319781 3300817
[2025-10-12 21:16:52] 2025-10-12 19:16:52,579 [wrapper] Test setup, not cleaning
[2025-10-12 21:16:52] 2025-10-12 19:16:52,581 [wrapper] apfmon messages muted
[2025-10-12 21:16:52] 2025-10-12 19:16:52,583 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:16:52] 2025-10-12 19:16:52,585 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:16:52]  *** Error codes and diagnostics ***
[2025-10-12 21:16:52]     "exeErrorCode": 0,
[2025-10-12 21:16:52]     "exeErrorDiag": "",
[2025-10-12 21:16:52]     "pilotErrorCode": 0,
[2025-10-12 21:16:52]     "pilotErrorDiag": "",
[2025-10-12 21:16:52]  *** Listing of results directory ***
[2025-10-12 21:16:52] total 415420
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:49 pilot3.tar.gz
[2025-10-12 21:16:52] -rwx------ 1 boinc boinc     36292 Oct 12 04:53 runpilot2-wrapper.sh
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc      5112 Oct 12 04:53 queuedata.json
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:16:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:53 run_atlas
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:53 job.xml
[2025-10-12 21:16:52] -rw-r--r-- 2 boinc boinc 221343470 Oct 12 19:53 EVNT.46676267._003194.pool.root.1
[2025-10-12 21:16:52] -rw-r--r-- 2 boinc boinc    569678 Oct 12 19:53 input.tar.gz
[2025-10-12 21:16:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:53 start_atlas.sh
[2025-10-12 21:16:52] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:53 shared
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:53 boinc_setup_complete
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc      6441 Oct 12 19:53 init_data.xml
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:53 boinc_lockfile
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc      2549 Oct 12 19:53 pandaJob.out
[2025-10-12 21:16:52] -rw------- 1 boinc boinc    975528 Oct 12 19:53 agis_schedconf.cvmfs.json
[2025-10-12 21:16:52] -rw------- 1 boinc boinc   1560580 Oct 12 19:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:16:52] drwx------ 5 boinc boinc      4096 Oct 12 19:53 pilot3
[2025-10-12 21:16:52] -rw------- 1 boinc boinc 198185405 Oct 12 21:15 HITS.46676269._069627.pool.root.1
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc       530 Oct 12 21:15 boinc_task_state.xml
[2025-10-12 21:16:52] -rw------- 1 boinc boinc      1021 Oct 12 21:15 memory_monitor_summary.json
[2025-10-12 21:16:52] -rw------- 1 boinc boinc    262362 Oct 12 21:15 log.46676269._069627.job.log.tgz.1
[2025-10-12 21:16:52] -rw------- 1 boinc boinc      7764 Oct 12 21:15 heartbeat.json
[2025-10-12 21:16:52] -rw------- 1 boinc boinc        95 Oct 12 21:16 pilot_heartbeat.json
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:16 wrapper_checkpoint.txt
[2025-10-12 21:16:52] -rw------- 1 boinc boinc      4824 Oct 12 21:16 pilotlog.txt
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:16 boinc_mmap_file
[2025-10-12 21:16:52] -rw------- 1 boinc boinc    723816 Oct 12 21:16 log.46676269._069627.job.log.1
[2025-10-12 21:16:52] -rw------- 1 boinc boinc       357 Oct 12 21:16 output.list
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:16 runtime_log
[2025-10-12 21:16:52] -rw------- 1 boinc boinc   1003520 Oct 12 21:16 result.tar.gz
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc      8782 Oct 12 21:16 runtime_log.err
[2025-10-12 21:16:52] -rw------- 1 boinc boinc       659 Oct 12 21:16 XAQODmJO1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmc2SMDmEbKvDn.diag
[2025-10-12 21:16:52] -rw-r--r-- 1 boinc boinc      7957 Oct 12 21:16 stderr.txt
[2025-10-12 21:16:52] HITS file was successfully produced:
[2025-10-12 21:16:52] -rw------- 1 boinc boinc 198185405 Oct 12 21:15 shared/HITS.pool.root.1
[2025-10-12 21:16:52]  *** Contents of shared directory: ***
[2025-10-12 21:16:52] total 411264
[2025-10-12 21:16:52] -rw-r--r-- 2 boinc boinc 221343470 Oct 12 19:53 ATLAS.root_0
[2025-10-12 21:16:52] -rw-r--r-- 2 boinc boinc    569678 Oct 12 19:53 input.tar.gz
[2025-10-12 21:16:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:53 start_atlas.sh
[2025-10-12 21:16:52] -rw------- 1 boinc boinc 198185405 Oct 12 21:15 HITS.pool.root.1
[2025-10-12 21:16:52] -rw------- 1 boinc boinc   1003520 Oct 12 21:16 result.tar.gz
21:16:54 (3297097): run_atlas exited; CPU time 14148.079728
21:16:54 (3297097): called boinc_finish(0)

</stderr_txt>
]]>

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