Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:54:45 (1343024): wrapper (7.7.26015): starting
17:54:45 (1343024): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 17:54:45] Arguments: --nthreads 4
[2025-10-13 17:54:45] Threads: 4
[2025-10-13 17:54:45] Checking for CVMFS
[2025-10-13 17:54:45] No cvmfs_config command found, will try listing directly
[2025-10-13 17:54:45] CVMFS is ok
[2025-10-13 17:54:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:54:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:54:45] Further information can be found at the LHC@home message board.
[2025-10-13 17:54:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:54:45] Checking for apptainer binary...
[2025-10-13 17:54:45] which: no apptainer in ((null))
[2025-10-13 17:54:45] apptainer is not installed, using version from CVMFS
[2025-10-13 17:54:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:54:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-13 17:54:45] apptainer works
[2025-10-13 17:54:45] Set ATHENA_PROC_NUMBER=4
[2025-10-13 17:54:45] Set ATHENA_CORE_NUMBER=4
[2025-10-13 17:54:45] Starting ATLAS job with PandaID=6839318319
[2025-10-13 17:54:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:08:18 (1490732): wrapper (7.7.26015): starting
19:08:18 (1490732): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:08:18] Arguments: --nthreads 4
[2025-10-13 19:08:18] Threads: 4
[2025-10-13 19:08:18] This job has been restarted, cleaning up previous attempt
[2025-10-13 19:08:18] Checking for CVMFS
[2025-10-13 19:08:18] No cvmfs_config command found, will try listing directly
[2025-10-13 19:08:18] CVMFS is ok
[2025-10-13 19:08:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:08:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:08:18] Further information can be found at the LHC@home message board.
[2025-10-13 19:08:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:08:18] Checking for apptainer binary...
[2025-10-13 19:08:18] which: no apptainer in ((null))
[2025-10-13 19:08:18] apptainer is not installed, using version from CVMFS
[2025-10-13 19:08:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:08:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-13 19:08:18] apptainer works
[2025-10-13 19:08:18] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:08:18] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:08:18] Starting ATLAS job with PandaID=6839318319
[2025-10-13 19:08:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:56:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:56:12] 2025-10-13 19:50:55,899 | INFO     | intersect: -28873383559.99992
[2025-10-13 21:56:12] 2025-10-13 19:50:55,900 | INFO     | chi2: 1.094340934471515
[2025-10-13 21:56:12] 2025-10-13 19:50:55,900 | INFO     | sum of square deviations: 1132458442.5
[2025-10-13 21:56:12] 2025-10-13 19:50:55,901 | INFO     | sum of deviations: 19761615937.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,901 | INFO     | mean x: 1760380013.5
[2025-10-13 21:56:12] 2025-10-13 19:50:55,901 | INFO     | mean y: 2305450.3896103897
[2025-10-13 21:56:12] 2025-10-13 19:50:55,901 | INFO     | -- intersect: -30716661731.452805
[2025-10-13 21:56:12] 2025-10-13 19:50:55,902 | INFO     | intersect: -30716661731.452805
[2025-10-13 21:56:12] 2025-10-13 19:50:55,902 | INFO     | chi2: 1.0947254557469268
[2025-10-13 21:56:12] 2025-10-13 19:50:55,902 | INFO     | current chi2=1.0947254557469268 (change=-0.03513724683958584 %)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,902 | INFO     | right removable region: 153
[2025-10-13 21:56:12] 2025-10-13 19:50:55,902 | INFO     | sum of square deviations: 1132458442.5
[2025-10-13 21:56:12] 2025-10-13 19:50:55,903 | INFO     | sum of deviations: 4030868959.0000005
[2025-10-13 21:56:12] 2025-10-13 19:50:55,903 | INFO     | mean x: 1760380318.5
[2025-10-13 21:56:12] 2025-10-13 19:50:55,903 | INFO     | mean y: 2327934.6233766233
[2025-10-13 21:56:12] 2025-10-13 19:50:55,904 | INFO     | -- intersect: -6263564141.92069
[2025-10-13 21:56:12] 2025-10-13 19:50:55,904 | INFO     | intersect: -6263564141.92069
[2025-10-13 21:56:12] 2025-10-13 19:50:55,904 | INFO     | chi2: 0.0019105243566656083
[2025-10-13 21:56:12] 2025-10-13 19:50:55,904 | INFO     | current chi2=0.0019105243566656083 (change=99.82541781116979 %)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,904 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,905 | INFO     | sum of deviations: 3378236425.0000005
[2025-10-13 21:56:12] 2025-10-13 19:50:55,905 | INFO     | mean x: 1760380471.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,906 | INFO     | mean y: 2328874.9060402685
[2025-10-13 21:56:12] 2025-10-13 19:50:55,906 | INFO     | -- intersect: -5795680529.745004
[2025-10-13 21:56:12] 2025-10-13 19:50:55,906 | INFO     | intersect: -5795680529.745004
[2025-10-13 21:56:12] 2025-10-13 19:50:55,906 | INFO     | chi2: 0.0014023267445519485
[2025-10-13 21:56:12] 2025-10-13 19:50:55,906 | INFO     | current chi2=0.0014023267445519485 (change=26.599902290730526 %)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,907 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,907 | INFO     | sum of deviations: 2639358461.5
[2025-10-13 21:56:12] 2025-10-13 19:50:55,907 | INFO     | mean x: 1760380623.5
[2025-10-13 21:56:12] 2025-10-13 19:50:55,908 | INFO     | mean y: 2330001.173611111
[2025-10-13 21:56:12] 2025-10-13 19:50:55,908 | INFO     | -- intersect: -5016009065.639777
[2025-10-13 21:56:12] 2025-10-13 19:50:55,908 | INFO     | intersect: -5016009065.639777
[2025-10-13 21:56:12] 2025-10-13 19:50:55,908 | INFO     | chi2: 0.0010421466656250567
[2025-10-13 21:56:12] 2025-10-13 19:50:55,908 | INFO     | current chi2=0.0010421466656250567 (change=25.684461936292273 %)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,909 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,909 | INFO     | sum of deviations: 2114407009.9999993
[2025-10-13 21:56:12] 2025-10-13 19:50:55,909 | INFO     | mean x: 1760380776.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | mean y: 2330860.0863309354
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | -- intersect: -4467538815.292163
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | intersect: -4467538815.292163
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | chi2: 0.0008921769450005798
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | current chi2=0.0008921769450005798 (change=14.390462069417872 %)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | left removable region: 40
[2025-10-13 21:56:12] 2025-10-13 19:50:55,910 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,911 | INFO     | sum of deviations: 702741472.0000002
[2025-10-13 21:56:12] 2025-10-13 19:50:55,911 | INFO     | mean x: 1760381203.0
[2025-10-13 21:56:12] 2025-10-13 19:50:55,911 | INFO     | mean y: 2333564.2831858406
[2025-10-13 21:56:12] 2025-10-13 19:50:55,911 | INFO     | -- intersect: -2762841075.231166
[2025-10-13 21:56:12] 2025-10-13 19:50:55,912 | INFO     | intersect: -2762841075.231166
[2025-10-13 21:56:12] 2025-10-13 19:50:55,912 | INFO     | chi2: 0.0005178457639117466
[2025-10-13 21:56:12] 2025-10-13 19:50:55,912 | INFO     | -- intersect: -2762841075.231166
[2025-10-13 21:56:12] 2025-10-13 19:50:55,912 | INFO     | current memory leak: 1.57 B/s (using 113 data points, chi2=0.00)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,912 | INFO     | could have reported an average CPU frequency of 2744 MHz (9 samples)
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | ..............................
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . Timing measurements:
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . get job = 0 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . initial setup = 1 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . payload setup = 8 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . stage-in = 0 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . payload execution = 9699 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . stage-out = 2 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | . log creation = 0 s
[2025-10-13 21:56:12] 2025-10-13 19:50:55,913 | INFO     | ..............................
[2025-10-13 21:56:12] 2025-10-13 19:50:56,012 | INFO     | 
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | job summary report
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | --------------------------------------------------
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | PanDA job id: 6839318319
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | task id: 46676269
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | errors: (none)
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:56:12] 2025-10-13 19:50:56,013 | INFO     | pilot state: finished 
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | transexitcode: 0
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | exeerrorcode: 0
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | exeerrordiag: 
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | exitcode: 0
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | exitmsg: OK
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | cpuconsumptiontime: 37719 s
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | nevents: 400
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | neventsw: 0
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | pid: 1572943
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | pgrp: 1572943
[2025-10-13 21:56:12] 2025-10-13 19:50:56,014 | INFO     | corecount: 4
[2025-10-13 21:56:12] 2025-10-13 19:50:56,015 | INFO     | event service: False
[2025-10-13 21:56:12] 2025-10-13 19:50:56,015 | INFO     | sizes: {0: 2348870, 7: 2349132, 11: 2349160, 9711: 2378157, 9712: 2378156, 9715: 2387234, 9717: 2387418, 9725: 2387676}
[2025-10-13 21:56:12] 2025-10-13 19:50:56,015 | INFO     | --------------------------------------------------
[2025-10-13 21:56:12] 2025-10-13 19:50:56,015 | INFO     | 
[2025-10-13 21:56:12] 2025-10-13 19:50:56,015 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:56:12] 2025-10-13 19:50:56,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:56:12] 2025-10-13 19:50:56,048 | INFO     | job 6839318319 has completed (purged errors)
[2025-10-13 21:56:12] 2025-10-13 19:50:56,048 | INFO     | overall cleanup function is called
[2025-10-13 21:56:12] 2025-10-13 19:50:57,055 | INFO     | --- collectZombieJob: --- 10, [1572943]
[2025-10-13 21:56:12] 2025-10-13 19:50:57,056 | INFO     | zombie collector waiting for pid 1572943
[2025-10-13 21:56:12] 2025-10-13 19:50:57,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:56:12] 2025-10-13 19:50:57,056 | INFO     | collected zombie processes
[2025-10-13 21:56:12] 2025-10-13 19:50:57,056 | INFO     | will attempt to kill all subprocesses of pid=1572943
[2025-10-13 21:56:12] 2025-10-13 19:50:57,771 | INFO     | process IDs to be killed: [1572943] (in reverse order)
[2025-10-13 21:56:12] 2025-10-13 19:50:58,032 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:56:12] 2025-10-13 19:50:58,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:56:12] 2025-10-13 19:50:58,066 | INFO     | did not find any defunct processes belonging to 1572943
[2025-10-13 21:56:12] 2025-10-13 19:50:58,097 | INFO     | did not find any defunct processes belonging to 1572943
[2025-10-13 21:56:12] 2025-10-13 19:50:58,097 | INFO     | ready for new job
[2025-10-13 21:56:12] 2025-10-13 19:50:58,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:56:12] 2025-10-13 19:50:58,099 | INFO     | ***************************************
[2025-10-13 21:56:12] 2025-10-13 19:50:58,100 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:56:12] 2025-10-13 19:50:58,100 | INFO     | ***************************************
[2025-10-13 21:56:12] 2025-10-13 19:50:58,100 | INFO     | 
[2025-10-13 21:56:12] 2025-10-13 19:50:58,108 | INFO     | architecture information:
[2025-10-13 21:56:12] 2025-10-13 19:50:58,108 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:56:12] 2025-10-13 19:50:58,130 | INFO     | cat /etc/os-release:
[2025-10-13 21:56:12] NAME="CentOS Linux"
[2025-10-13 21:56:12] VERSION="7 (Core)"
[2025-10-13 21:56:12] ID="centos"
[2025-10-13 21:56:12] ID_LIKE="rhel fedora"
[2025-10-13 21:56:12] VERSION_ID="7"
[2025-10-13 21:56:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:56:12] ANSI_COLOR="0;31"
[2025-10-13 21:56:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:56:12] HOME_URL="https://www.centos.org/"
[2025-10-13 21:56:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:56:12] 
[2025-10-13 21:56:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:56:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:56:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:56:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:56:12] 
[2025-10-13 21:56:12] 2025-10-13 19:50:58,130 | INFO     | ***************************************
[2025-10-13 21:56:12] 2025-10-13 19:50:58,633 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-13 21:56:12] 2025-10-13 19:50:58,656 | INFO     | sufficient remaining disk space (3340076318720 B)
[2025-10-13 21:56:12] 2025-10-13 19:50:58,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:56:12] 2025-10-13 19:50:58,657 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:56:12] 2025-10-13 19:50:58,657 | INFO     | update_server=False
[2025-10-13 21:56:12] 2025-10-13 19:50:58,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:56:12] 2025-10-13 19:50:58,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:56:12] 2025-10-13 19:50:58,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:56:12] 2025-10-13 19:50:59,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:56:12] 2025-10-13 19:50:59,587 | INFO     | aborting loop
[2025-10-13 21:56:12] 2025-10-13 19:50:59,662 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:50:59,723 | INFO     | all job control threads have been joined
[2025-10-13 21:56:12] 2025-10-13 19:50:59,730 | INFO     | all data control threads have been joined
[2025-10-13 21:56:12] 2025-10-13 19:50:59,744 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:50:59,851 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,108 | INFO     | all payload control threads have been joined
[2025-10-13 21:56:12] 2025-10-13 19:51:00,390 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,410 | INFO     | [job] validate thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,592 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,646 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,664 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,729 | INFO     | [job] control thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:00,735 | INFO     | [data] control thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:01,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:56:12] 2025-10-13 19:51:01,114 | INFO     | [payload] control thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:01,148 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:01,249 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:02,030 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:02,663 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:09,253 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:56:12] 2025-10-13 19:51:10,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:56:12] 2025-10-13 19:51:28,069 | INFO     | PID=1512489 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 21:56:12] 2025-10-13 19:51:28,069 | INFO     | .. there are 8 such processes running
[2025-10-13 21:56:12] 2025-10-13 19:51:28,069 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:56:12] 2025-10-13 19:51:28,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:56:12] 2025-10-13 19:51:28,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:56:12] 2025-10-13 19:51:47,554 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:56:12] 2025-10-13 19:51:47,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23261988362048)>', '<ExcThread(monitor, started 23261754656512)>']
[2025-10-13 21:56:12] 2025-10-13 19:51:48,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:56:12] 2025-10-13 19:51:48,161 | INFO     | [monitor] control thread has ended
[2025-10-13 21:56:12] 2025-10-13 19:51:52,654 | INFO     | all workflow threads have been joined
[2025-10-13 21:56:12] 2025-10-13 19:51:52,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:56:12] 2025-10-13 19:51:52,655 | INFO     | traces error code: 0
[2025-10-13 21:56:12] 2025-10-13 19:51:52,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:56:12] 2025-10-13 19:51:52,799 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:56:12] 2025-10-13 19:51:52,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:56:12] 2025-10-13 19:51:52,807 [wrapper] pilotpid: 1512489
[2025-10-13 21:56:12] 2025-10-13 19:51:52,810 [wrapper] Pilot exit status: 0
[2025-10-13 21:56:12] 2025-10-13 19:51:52,821 [wrapper] pandaids: 6839318319 6839318319
[2025-10-13 21:56:12] 2025-10-13 19:51:52,997 [wrapper] cleanup supervisor_pilot 2020730 1512490
[2025-10-13 21:56:12] 2025-10-13 19:51:53,001 [wrapper] Test setup, not cleaning
[2025-10-13 21:56:12] 2025-10-13 19:51:53,004 [wrapper] apfmon messages muted
[2025-10-13 21:56:12] 2025-10-13 19:51:53,007 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:56:12] 2025-10-13 19:51:53,011 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:56:12]  *** Error codes and diagnostics ***
[2025-10-13 21:56:12]     "exeErrorCode": 0,
[2025-10-13 21:56:12]     "exeErrorDiag": "",
[2025-10-13 21:56:12]     "pilotErrorCode": 0,
[2025-10-13 21:56:12]     "pilotErrorDiag": "",
[2025-10-13 21:56:12]  *** Listing of results directory ***
[2025-10-13 21:56:12] total 633304
[2025-10-13 21:56:12] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:56 pilot3.tar.gz
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:00 queuedata.json
[2025-10-13 21:56:12] -rwx------ 1 boinc boinc     36292 Oct 12 05:00 runpilot2-wrapper.sh
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:56:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:54 run_atlas
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:54 job.xml
[2025-10-13 21:56:12] -rw-r--r-- 3 boinc boinc 220236804 Oct 13 17:54 EVNT.46676267._003200.pool.root.1
[2025-10-13 21:56:12] -rw-r--r-- 3 boinc boinc 220236804 Oct 13 17:54 ATLAS.root_0
[2025-10-13 21:56:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:54 start_atlas.sh
[2025-10-13 21:56:12] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:54 shared
[2025-10-13 21:56:12] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:54 input.tar.gz
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:54 boinc_lockfile
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc      6693 Oct 13 19:08 init_data.xml
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc      2551 Oct 13 19:08 pandaJob.out
[2025-10-13 21:56:12] -rw------- 1 boinc boinc    972783 Oct 13 19:08 agis_schedconf.cvmfs.json
[2025-10-13 21:56:12] -rw------- 1 boinc boinc 200733745 Oct 13 21:50 HITS.46676269._069740.pool.root.1
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:50 boinc_task_state.xml
[2025-10-13 21:56:12] -rw------- 1 boinc boinc      1039 Oct 13 21:50 memory_monitor_summary.json
[2025-10-13 21:56:12] -rw------- 1 boinc boinc   1560580 Oct 13 21:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:56:12] -rw------- 1 boinc boinc    332716 Oct 13 21:50 log.46676269._069740.job.log.tgz.1
[2025-10-13 21:56:12] -rw------- 1 boinc boinc      7819 Oct 13 21:50 heartbeat.json
[2025-10-13 21:56:12] -rw------- 1 boinc boinc        97 Oct 13 21:51 pilot_heartbeat.json
[2025-10-13 21:56:12] -rw------- 1 boinc boinc      4908 Oct 13 21:51 pilotlog.txt
[2025-10-13 21:56:12] -rw------- 1 boinc boinc   1362588 Oct 13 21:51 log.46676269._069740.job.log.1
[2025-10-13 21:56:12] -rw------- 1 boinc boinc       357 Oct 13 21:51 output.list
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:51 runtime_log
[2025-10-13 21:56:12] -rw------- 1 boinc boinc   1710080 Oct 13 21:51 result.tar.gz
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc      9161 Oct 13 21:51 runtime_log.err
[2025-10-13 21:56:12] -rw------- 1 boinc boinc       792 Oct 13 21:51 B1gLDmGV1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmz3SMDmJoYttn.diag
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc        26 Oct 13 21:55 wrapper_checkpoint.txt
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:56 boinc_mmap_file
[2025-10-13 21:56:12] -rw-r--r-- 1 boinc boinc     22629 Oct 13 21:56 stderr.txt
[2025-10-13 21:56:12] HITS file was successfully produced:
[2025-10-13 21:56:12] -rw------- 1 boinc boinc 200733745 Oct 13 21:50 shared/HITS.pool.root.1
[2025-10-13 21:56:12]  *** Contents of shared directory: ***
[2025-10-13 21:56:12] total 413364
[2025-10-13 21:56:12] -rw-r--r-- 3 boinc boinc 220236804 Oct 13 17:54 ATLAS.root_0
[2025-10-13 21:56:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:54 start_atlas.sh
[2025-10-13 21:56:12] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:54 input.tar.gz
[2025-10-13 21:56:12] -rw------- 1 boinc boinc 200733745 Oct 13 21:50 HITS.pool.root.1
[2025-10-13 21:56:12] -rw------- 1 boinc boinc   1710080 Oct 13 21:51 result.tar.gz
21:56:13 (1490732): run_atlas exited; CPU time 38411.946274
21:56:13 (1490732): called boinc_finish(0)

</stderr_txt>
]]>

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