Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:06:55 (7873): wrapper (7.7.26015): starting
04:06:55 (7873): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 04:06:55] Arguments: --nthreads 4
[2025-10-12 04:06:55] Threads: 4
[2025-10-12 04:06:55] Checking for CVMFS
[2025-10-12 04:06:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:06:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:06:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:06:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:06:55] 2.11.2.0 2311 42382 67424 151612 3 57 20027812 20275201 1 130560 0 22242937 99.989 1371456 55827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 04:06:55] CVMFS is ok
[2025-10-12 04:06:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:06:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:06:55] Further information can be found at the LHC@home message board.
[2025-10-12 04:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:06:55] Checking for apptainer binary...
[2025-10-12 04:06:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:06:55] Running /usr/bin/apptainer --version
[2025-10-12 04:06:55] apptainer version 1.3.2-1.el7
[2025-10-12 04:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:06:56] c-205-34.aglt2.org
[2025-10-12 04:06:56] apptainer works
[2025-10-12 04:06:56] Set ATHENA_PROC_NUMBER=4
[2025-10-12 04:06:56] Set ATHENA_CORE_NUMBER=4
[2025-10-12 04:06:56] Starting ATLAS job with PandaID=6839317668
[2025-10-12 04:06:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:35:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:35:19]  protocol_id=None
[2025-10-12 05:35:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 05:35:19]  replicas=None
[2025-10-12 05:35:19]  scope=mc23_13p6TeV
[2025-10-12 05:35:19]  status=None
[2025-10-12 05:35:19]  status_code=0
[2025-10-12 05:35:19]  storage_token=
[2025-10-12 05:35:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839317668/log.46676269._069707.job.log.tgz.1
[2025-10-12 05:35:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/0e/log.46676269._069707.job.log.tgz.1
[2025-10-12 05:35:19]  workdir=None
[2025-10-12 05:35:19] ]
[2025-10-12 05:35:19] 2025-10-12 09:34:29,784 | INFO     | transferring file log.46676269._069707.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839317668/log.46676269._069707.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 05:35:19] 2025-10-12 09:34:29,784 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839317668/log.46676269._069707.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._069707.job
[2025-10-12 05:35:19] 2025-10-12 09:34:29,796 | INFO     | adding to output.list: log.46676269._069707.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/0e/log.46676269._069707.job.log.tg
[2025-10-12 05:35:19] 2025-10-12 09:34:29,796 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 05:35:19] 2025-10-12 09:34:29,796 | INFO     | summary of transferred files:
[2025-10-12 05:35:19] 2025-10-12 09:34:29,796 | INFO     |  -- lfn=log.46676269._069707.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 05:35:19] 2025-10-12 09:34:29,796 | INFO     | stage-out finished correctly
[2025-10-12 05:35:19] 2025-10-12 09:34:29,834 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 05:35:19] 2025-10-12 09:34:30,456 | INFO     | time since job start (5246s) is within the limit (172800.0s)
[2025-10-12 05:35:19] 2025-10-12 09:34:31,095 | INFO     | job 6839317668 has state=finished
[2025-10-12 05:35:19] 2025-10-12 09:34:31,095 | INFO     | preparing for final server update for job 6839317668 in state='finished'
[2025-10-12 05:35:19] 2025-10-12 09:34:31,157 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 05:35:19] 2025-10-12 09:34:31,157 | INFO     | this job has now completed (state=finished)
[2025-10-12 05:35:19] 2025-10-12 09:34:31,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 05:35:19] 2025-10-12 09:34:31,157 | INFO     | log transfer has been attempted: DONE
[2025-10-12 05:35:19] 2025-10-12 09:34:31,157 | INFO     | job 6839317668 has finished - writing final server update
[2025-10-12 05:35:19] 2025-10-12 09:34:31,158 | INFO     | total number of processed events: 400 (read)
[2025-10-12 05:35:19] 2025-10-12 09:34:31,158 | INFO     | executing command: lscpu
[2025-10-12 05:35:19] 2025-10-12 09:34:31,183 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 05:35:19] 2025-10-12 09:34:32,462 | INFO     | time since job start (5248s) is within the limit (172800.0s)
[2025-10-12 05:35:19] 2025-10-12 09:34:34,405 | WARNING  | process 17901 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 05:35:19] 2025-10-12 09:34:34,405 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839317668/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:35:19] 2025-10-12 09:34:34,467 | INFO     | time since job start (5250s) is within the limit (172800.0s)
[2025-10-12 05:35:19] 2025-10-12 09:34:34,510 | INFO     | number of running child processes to parent process 17901: 1
[2025-10-12 05:35:19] 2025-10-12 09:34:34,510 | INFO     | maximum number of monitored processes: 6
[2025-10-12 05:35:19] 2025-10-12 09:34:35,298 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 05:35:19] 2025-10-12 09:34:35,299 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 2228.8965
[2025-10-12 05:35:19] 2025-10-12 09:34:35,300 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839317668/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:35:19] 2025-10-12 09:34:35,300 | INFO     | extracted standard info from prmon json
[2025-10-12 05:35:19] 2025-10-12 09:34:35,300 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:35:19] 2025-10-12 09:34:35,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:35:19] 2025-10-12 09:34:35,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:35:19] 2025-10-12 09:34:35,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:35:19] 2025-10-12 09:34:35,302 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:35:19] 2025-10-12 09:34:35,302 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,302 | INFO     | sum of deviations: -3308343539.9999995
[2025-10-12 05:35:19] 2025-10-12 09:34:35,302 | INFO     | mean x: 1760259130.0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,302 | INFO     | mean y: 2362145.8860759493
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | -- intersect: 38099916837.981544
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | intersect: 38099916837.981544
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | chi2: 0.06485945144436521
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | -- intersect: 38099916837.981544
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | current memory leak: -21.64 B/s (using 79 data points, chi2=0.06)
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | could have reported an average CPU frequency of 3047 MHz (6 samples)
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | ..............................
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | . Timing measurements:
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | . get job = 0 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | . initial setup = 2 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | . payload setup = 3 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,303 | INFO     | . stage-in = 0 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,304 | INFO     | . payload execution = 5224 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,304 | INFO     | . stage-out = 0 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,304 | INFO     | . log creation = 0 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,304 | INFO     | ..............................
[2025-10-12 05:35:19] 2025-10-12 09:34:35,636 | INFO     | 
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | job summary report
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | --------------------------------------------------
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | PanDA job id: 6839317668
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | task id: 46676269
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | errors: (none)
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | pilot state: finished 
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | transexitcode: 0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | exeerrorcode: 0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | exeerrordiag: 
[2025-10-12 05:35:19] 2025-10-12 09:34:35,637 | INFO     | exitcode: 0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | exitmsg: OK
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | cpuconsumptiontime: 19857 s
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | nevents: 400
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | neventsw: 0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | pid: 17901
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | pgrp: 17901
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | corecount: 4
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | event service: False
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | sizes: {0: 2348851, 3: 2349113, 11: 2349141, 5232: 2384722, 5238: 2384860}
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | --------------------------------------------------
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | 
[2025-10-12 05:35:19] 2025-10-12 09:34:35,638 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,658 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:35:19] 2025-10-12 09:34:35,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:35:19] 2025-10-12 09:34:35,659 | INFO     | job 6839317668 has completed (purged errors)
[2025-10-12 05:35:19] 2025-10-12 09:34:35,659 | INFO     | overall cleanup function is called
[2025-10-12 05:35:19] 2025-10-12 09:34:36,666 | INFO     | --- collectZombieJob: --- 10, [17901]
[2025-10-12 05:35:19] 2025-10-12 09:34:36,666 | INFO     | zombie collector waiting for pid 17901
[2025-10-12 05:35:19] 2025-10-12 09:34:36,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:35:19] 2025-10-12 09:34:36,666 | INFO     | collected zombie processes
[2025-10-12 05:35:19] 2025-10-12 09:34:36,666 | INFO     | will attempt to kill all subprocesses of pid=17901
[2025-10-12 05:35:19] 2025-10-12 09:34:36,697 | INFO     | process IDs to be killed: [17901] (in reverse order)
[2025-10-12 05:35:19] 2025-10-12 09:34:36,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:35:19] 2025-10-12 09:34:36,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:35:19] 2025-10-12 09:34:36,720 | INFO     | did not find any defunct processes belonging to 17901
[2025-10-12 05:35:19] 2025-10-12 09:34:36,721 | INFO     | did not find any defunct processes belonging to 17901
[2025-10-12 05:35:19] 2025-10-12 09:34:36,721 | INFO     | ready for new job
[2025-10-12 05:35:19] 2025-10-12 09:34:36,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:35:19] 2025-10-12 09:34:36,722 | INFO     | ***************************************
[2025-10-12 05:35:19] 2025-10-12 09:34:36,722 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:35:19] 2025-10-12 09:34:36,722 | INFO     | ***************************************
[2025-10-12 05:35:19] 2025-10-12 09:34:36,722 | INFO     | 
[2025-10-12 05:35:19] 2025-10-12 09:34:36,722 | INFO     | architecture information:
[2025-10-12 05:35:19] 2025-10-12 09:34:36,722 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:35:19] 2025-10-12 09:34:36,731 | INFO     | cat /etc/os-release:
[2025-10-12 05:35:19] NAME="CentOS Linux"
[2025-10-12 05:35:19] VERSION="7 (Core)"
[2025-10-12 05:35:19] ID="centos"
[2025-10-12 05:35:19] ID_LIKE="rhel fedora"
[2025-10-12 05:35:19] VERSION_ID="7"
[2025-10-12 05:35:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:35:19] ANSI_COLOR="0;31"
[2025-10-12 05:35:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:35:19] HOME_URL="https://www.centos.org/"
[2025-10-12 05:35:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:35:19] 
[2025-10-12 05:35:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:35:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:35:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:35:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:35:19] 
[2025-10-12 05:35:19] 2025-10-12 09:34:36,731 | INFO     | ***************************************
[2025-10-12 05:35:19] 2025-10-12 09:34:37,233 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:35:19] 2025-10-12 09:34:37,249 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-10-12 05:35:19] 2025-10-12 09:34:37,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:35:19] 2025-10-12 09:34:37,250 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:35:19] 2025-10-12 09:34:37,250 | INFO     | update_server=False
[2025-10-12 05:35:19] 2025-10-12 09:34:37,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:35:19] 2025-10-12 09:34:37,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:35:19] 2025-10-12 09:34:37,538 | INFO     | all data control threads have been joined
[2025-10-12 05:35:19] 2025-10-12 09:34:37,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:35:19] 2025-10-12 09:34:38,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:35:19] 2025-10-12 09:34:38,018 | INFO     | aborting loop
[2025-10-12 05:35:19] 2025-10-12 09:34:38,251 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:38,256 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:38,290 | INFO     | all job control threads have been joined
[2025-10-12 05:35:19] 2025-10-12 09:34:38,307 | INFO     | all payload control threads have been joined
[2025-10-12 05:35:19] 2025-10-12 09:34:38,386 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:38,398 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:38,543 | INFO     | [data] control thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,019 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,209 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,295 | INFO     | [job] control thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,312 | INFO     | [payload] control thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,329 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,348 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,650 | INFO     | [job] validate thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:39,853 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:40,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:35:19] 2025-10-12 09:34:44,384 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:34:48,167 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:35:19] 2025-10-12 09:34:49,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:35:19] 2025-10-12 09:35:07,599 | INFO     | PID=11563 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 05:35:19] 2025-10-12 09:35:07,599 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:35:19] 2025-10-12 09:35:07,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:35:19] 2025-10-12 09:35:07,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:35:19] 2025-10-12 09:35:12,880 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:35:19] 2025-10-12 09:35:13,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067479865152)>', '<ExcThread(monitor, started 140067045623552)>']
[2025-10-12 05:35:19] 2025-10-12 09:35:14,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:35:19] 2025-10-12 09:35:14,633 | INFO     | [monitor] control thread has ended
[2025-10-12 05:35:19] 2025-10-12 09:35:18,909 | INFO     | all workflow threads have been joined
[2025-10-12 05:35:19] 2025-10-12 09:35:18,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:35:19] 2025-10-12 09:35:18,910 | INFO     | traces error code: 0
[2025-10-12 05:35:19] 2025-10-12 09:35:18,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:35:19] 2025-10-12 09:35:18,967 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:35:19] 2025-10-12 09:35:18,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:35:19] 2025-10-12 09:35:18,971 [wrapper] pilotpid: 11563
[2025-10-12 05:35:19] 2025-10-12 09:35:18,973 [wrapper] Pilot exit status: 0
[2025-10-12 05:35:19] 2025-10-12 09:35:18,979 [wrapper] pandaids: 6839317668
[2025-10-12 05:35:19] 2025-10-12 09:35:18,994 [wrapper] cleanup supervisor_pilot 13194 11564
[2025-10-12 05:35:19] 2025-10-12 09:35:18,996 [wrapper] Test setup, not cleaning
[2025-10-12 05:35:19] 2025-10-12 09:35:18,998 [wrapper] apfmon messages muted
[2025-10-12 05:35:19] 2025-10-12 09:35:19,000 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:35:19] 2025-10-12 09:35:19,002 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:35:19]  *** Error codes and diagnostics ***
[2025-10-12 05:35:19]     "exeErrorCode": 0,
[2025-10-12 05:35:19]     "exeErrorDiag": "",
[2025-10-12 05:35:19]     "pilotErrorCode": 0,
[2025-10-12 05:35:19]     "pilotErrorDiag": "",
[2025-10-12 05:35:19]  *** Listing of results directory ***
[2025-10-12 05:35:19] total 408048
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 05:35:19] -rwx------ 1 boincer umatlas     36292 Oct 11 22:57 runpilot2-wrapper.sh
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:57 queuedata.json
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas       100 Oct 12 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:35:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 04:06 run_atlas
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas       105 Oct 12 04:06 job.xml
[2025-10-12 05:35:19] -rw-r--r-- 2 boincer umatlas 223691942 Oct 12 04:06 EVNT.46676267._003198.pool.root.1
[2025-10-12 05:35:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:06 start_atlas.sh
[2025-10-12 05:35:19] drwxrwx--x 2 boincer umatlas      4096 Oct 12 04:06 shared
[2025-10-12 05:35:19] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 04:06 input.tar.gz
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas         0 Oct 12 04:06 boinc_lockfile
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 04:06 pandaJob.out
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas    975520 Oct 12 04:07 agis_schedconf.cvmfs.json
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas   1560580 Oct 12 04:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:35:19] drwx------ 5 boincer umatlas      4096 Oct 12 04:07 pilot3
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas      6237 Oct 12 05:31 init_data.xml
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas 188207330 Oct 12 05:34 HITS.46676269._069707.pool.root.1
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas      1042 Oct 12 05:34 memory_monitor_summary.json
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas    258697 Oct 12 05:34 log.46676269._069707.job.log.tgz.1
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas       529 Oct 12 05:34 boinc_task_state.xml
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas      7822 Oct 12 05:34 heartbeat.json
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas        95 Oct 12 05:35 pilot_heartbeat.json
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:35 boinc_mmap_file
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas      4818 Oct 12 05:35 pilotlog.txt
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:35 wrapper_checkpoint.txt
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas    760253 Oct 12 05:35 log.46676269._069707.job.log.1
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas       357 Oct 12 05:35 output.list
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:35 runtime_log
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas   1034240 Oct 12 05:35 result.tar.gz
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 05:35 runtime_log.err
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas       656 Oct 12 05:35 MNGNDm8R1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGPiNDmRgW0Gm.diag
[2025-10-12 05:35:19] -rw-r--r-- 1 boincer umatlas     21709 Oct 12 05:35 stderr.txt
[2025-10-12 05:35:19] HITS file was successfully produced:
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas 188207330 Oct 12 05:34 shared/HITS.pool.root.1
[2025-10-12 05:35:19]  *** Contents of shared directory: ***
[2025-10-12 05:35:19] total 403844
[2025-10-12 05:35:19] -rw-r--r-- 2 boincer umatlas 223691942 Oct 12 04:06 ATLAS.root_0
[2025-10-12 05:35:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:06 start_atlas.sh
[2025-10-12 05:35:19] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 04:06 input.tar.gz
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas 188207330 Oct 12 05:34 HITS.pool.root.1
[2025-10-12 05:35:19] -rw------- 1 boincer umatlas   1034240 Oct 12 05:35 result.tar.gz
05:35:20 (7873): run_atlas exited; CPU time 19870.156071
05:35:20 (7873): called boinc_finish(0)

</stderr_txt>
]]>

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