Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:50:55 (4095854): wrapper (7.7.26015): starting
13:50:55 (4095854): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:50:55] Arguments: --nthreads 12
[2025-10-12 13:50:55] Threads: 12
[2025-10-12 13:50:55] Checking for CVMFS
[2025-10-12 13:50:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:50:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:50:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:50:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:50:56] 2.13.2.0 8715 29010 233068 151619 3 188 40266205 46080001 6454 130560 0 195202118 99.887 56032625 21596 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 13:50:56] CVMFS is ok
[2025-10-12 13:50:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:50:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:50:56] Further information can be found at the LHC@home message board.
[2025-10-12 13:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:50:56] Checking for apptainer binary...
[2025-10-12 13:50:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:50:56] Running /usr/bin/apptainer --version
[2025-10-12 13:50:56] apptainer version 1.4.2-1.el9
[2025-10-12 13:50:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:50:56] mff2104.farm.particle.cz
[2025-10-12 13:50:56] apptainer works
[2025-10-12 13:50:56] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:50:56] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:50:56] Starting ATLAS job with PandaID=6830717363
[2025-10-12 13:50:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:37:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:37:16]  status_code=0
[2025-10-12 14:37:16]  storage_token=
[2025-10-12 14:37:16]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-6830717363/log.46376905._072807.job.log.tgz.1
[2025-10-12 14:37:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/24/log.46376905._072807.job.log.tgz.1
[2025-10-12 14:37:16]  workdir=None
[2025-10-12 14:37:16] ]
[2025-10-12 14:37:16] 2025-10-12 12:36:18,233 | INFO     | transferring file log.46376905._072807.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6830717363/log.46376905._072807.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-12 14:37:16] 2025-10-12 12:36:18,233 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6830717363/log.46376905._072807.job.log.tgz.1 /scratch/.boinc/slots/6/log.46376905._072807.j
[2025-10-12 14:37:16] 2025-10-12 12:36:18,258 | INFO     | adding to output.list: log.46376905._072807.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/24/log.46376905._072807.job.log.tg
[2025-10-12 14:37:16] 2025-10-12 12:36:18,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:37:16] 2025-10-12 12:36:18,259 | INFO     | summary of transferred files:
[2025-10-12 14:37:16] 2025-10-12 12:36:18,259 | INFO     |  -- lfn=log.46376905._072807.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:37:16] 2025-10-12 12:36:18,260 | INFO     | stage-out finished correctly
[2025-10-12 14:37:16] 2025-10-12 12:36:19,119 | INFO     | monitor loop #202: job 0:6830717363 is in state 'finished'
[2025-10-12 14:37:16] 2025-10-12 12:36:19,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:37:16] 2025-10-12 12:36:19,435 | INFO     | time since job start (2712s) is within the limit (172800.0s)
[2025-10-12 14:37:16] 2025-10-12 12:36:21,307 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:37:16] 2025-10-12 12:36:21,507 | INFO     | time since job start (2714s) is within the limit (172800.0s)
[2025-10-12 14:37:16] 2025-10-12 12:36:21,624 | INFO     | monitor loop #203: job 0:6830717363 is in state 'finished'
[2025-10-12 14:37:16] 2025-10-12 12:36:21,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:37:16] 2025-10-12 12:36:22,206 | INFO     | job 6830717363 has state=finished
[2025-10-12 14:37:16] 2025-10-12 12:36:22,207 | INFO     | preparing for final server update for job 6830717363 in state='finished'
[2025-10-12 14:37:16] 2025-10-12 12:36:22,207 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:37:16] 2025-10-12 12:36:22,207 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:37:16] 2025-10-12 12:36:22,208 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:37:16] 2025-10-12 12:36:22,208 | INFO     | job 6830717363 has finished - writing final server update
[2025-10-12 14:37:16] 2025-10-12 12:36:22,208 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:37:16] 2025-10-12 12:36:22,209 | INFO     | executing command: lscpu
[2025-10-12 14:37:16] 2025-10-12 12:36:22,288 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:37:16] 2025-10-12 12:36:23,510 | INFO     | time since job start (2716s) is within the limit (172800.0s)
[2025-10-12 14:37:16] 2025-10-12 12:36:24,128 | INFO     | monitor loop #204: job 0:6830717363 is in state 'finished'
[2025-10-12 14:37:16] 2025-10-12 12:36:24,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:37:16] 2025-10-12 12:36:25,511 | INFO     | time since job start (2718s) is within the limit (172800.0s)
[2025-10-12 14:37:16] 2025-10-12 12:36:26,631 | INFO     | monitor loop #205: job 0:6830717363 is in state 'finished'
[2025-10-12 14:37:16] 2025-10-12 12:36:26,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:37:16] 2025-10-12 12:36:27,515 | INFO     | time since job start (2720s) is within the limit (172800.0s)
[2025-10-12 14:37:16] 2025-10-12 12:36:27,970 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:37:16] 2025-10-12 12:36:27,985 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2749.5509166666666
[2025-10-12 14:37:16] 2025-10-12 12:36:28,003 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6830717363/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:37:16] 2025-10-12 12:36:28,003 | INFO     | extracted standard info from prmon json
[2025-10-12 14:37:16] 2025-10-12 12:36:28,004 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:37:16] 2025-10-12 12:36:28,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:37:16] 2025-10-12 12:36:28,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:37:16] 2025-10-12 12:36:28,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:37:16] 2025-10-12 12:36:28,005 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | sum of square deviations: 15695178.0
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | sum of deviations: -416039641.99999994
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | mean x: 1760271299.0
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | mean y: 2685462.810810811
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | -- intersect: 46663044527.15751
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | intersect: 46663044527.15751
[2025-10-12 14:37:16] 2025-10-12 12:36:28,006 | INFO     | chi2: 0.0011947414259763063
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | -- intersect: 46663044527.15751
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | current memory leak: -26.51 B/s (using 37 data points, chi2=0.00)
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | could have reported an average CPU frequency of 2745 MHz (5 samples)
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | ..............................
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | . Timing measurements:
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | . get job = 0 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | . initial setup = 1 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | . payload setup = 6 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | . stage-in = 0 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,007 | INFO     | . payload execution = 2682 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,008 | INFO     | . stage-out = 0 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,008 | INFO     | . log creation = 0 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,008 | INFO     | ..............................
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | 
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | job summary report
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | --------------------------------------------------
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | PanDA job id: 6830717363
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | task id: 46376905
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | errors: (none)
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:37:16] 2025-10-12 12:36:28,351 | INFO     | pilot state: finished 
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | transexitcode: 0
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | exeerrorcode: 0
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | exeerrordiag: 
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | exitcode: 0
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | exitmsg: OK
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | cpuconsumptiontime: 28794 s
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | nevents: 400
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | neventsw: 0
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | pid: 4107027
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | pgrp: 4107027
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | corecount: 12
[2025-10-12 14:37:16] 2025-10-12 12:36:28,352 | INFO     | event service: False
[2025-10-12 14:37:16] 2025-10-12 12:36:28,353 | INFO     | sizes: {0: 2348817, 5: 2349079, 11: 2349135, 2692: 2374403, 2694: 2383403, 2697: 2383459, 2704: 2383813}
[2025-10-12 14:37:16] 2025-10-12 12:36:28,353 | INFO     | --------------------------------------------------
[2025-10-12 14:37:16] 2025-10-12 12:36:28,353 | INFO     | 
[2025-10-12 14:37:16] 2025-10-12 12:36:28,353 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-10-12 14:37:16] 2025-10-12 12:36:28,380 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:37:16] 2025-10-12 12:36:28,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:37:16] 2025-10-12 12:36:28,383 | INFO     | job 6830717363 has completed (purged errors)
[2025-10-12 14:37:16] 2025-10-12 12:36:28,383 | INFO     | overall cleanup function is called
[2025-10-12 14:37:16] 2025-10-12 12:36:29,392 | INFO     | --- collectZombieJob: --- 10, [4107027]
[2025-10-12 14:37:16] 2025-10-12 12:36:29,393 | INFO     | zombie collector waiting for pid 4107027
[2025-10-12 14:37:16] 2025-10-12 12:36:29,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:37:16] 2025-10-12 12:36:29,393 | INFO     | collected zombie processes
[2025-10-12 14:37:16] 2025-10-12 12:36:29,393 | INFO     | will attempt to kill all subprocesses of pid=4107027
[2025-10-12 14:37:16] 2025-10-12 12:36:29,736 | INFO     | process IDs to be killed: [4107027] (in reverse order)
[2025-10-12 14:37:16] 2025-10-12 12:36:29,857 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:37:16] 2025-10-12 12:36:29,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:37:16] 2025-10-12 12:36:29,869 | INFO     | did not find any defunct processes belonging to 4107027
[2025-10-12 14:37:16] 2025-10-12 12:36:29,879 | INFO     | did not find any defunct processes belonging to 4107027
[2025-10-12 14:37:16] 2025-10-12 12:36:29,880 | INFO     | ready for new job
[2025-10-12 14:37:16] 2025-10-12 12:36:29,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:37:16] 2025-10-12 12:36:29,882 | INFO     | ***************************************
[2025-10-12 14:37:16] 2025-10-12 12:36:29,882 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 14:37:16] 2025-10-12 12:36:29,882 | INFO     | ***************************************
[2025-10-12 14:37:16] 2025-10-12 12:36:29,882 | INFO     | 
[2025-10-12 14:37:16] 2025-10-12 12:36:29,888 | INFO     | architecture information:
[2025-10-12 14:37:16] 2025-10-12 12:36:29,888 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:37:16] 2025-10-12 12:36:29,911 | INFO     | cat /etc/os-release:
[2025-10-12 14:37:16] NAME="CentOS Linux"
[2025-10-12 14:37:16] VERSION="7 (Core)"
[2025-10-12 14:37:16] ID="centos"
[2025-10-12 14:37:16] ID_LIKE="rhel fedora"
[2025-10-12 14:37:16] VERSION_ID="7"
[2025-10-12 14:37:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:37:16] ANSI_COLOR="0;31"
[2025-10-12 14:37:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:37:16] HOME_URL="https://www.centos.org/"
[2025-10-12 14:37:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:37:16] 
[2025-10-12 14:37:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:37:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:37:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:37:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:37:16] 
[2025-10-12 14:37:16] 2025-10-12 12:36:29,911 | INFO     | ***************************************
[2025-10-12 14:37:16] 2025-10-12 12:36:30,414 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-10-12 14:37:16] 2025-10-12 12:36:30,440 | INFO     | sufficient remaining disk space (1681349672960 B)
[2025-10-12 14:37:16] 2025-10-12 12:36:30,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:37:16] 2025-10-12 12:36:30,441 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:37:16] 2025-10-12 12:36:30,441 | INFO     | update_server=False
[2025-10-12 14:37:16] 2025-10-12 12:36:30,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:37:16] 2025-10-12 12:36:30,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:37:16] 2025-10-12 12:36:30,442 | INFO     | aborting loop
[2025-10-12 14:37:16] 2025-10-12 12:36:31,317 | INFO     | all data control threads have been joined
[2025-10-12 14:37:16] 2025-10-12 12:36:31,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:37:16] 2025-10-12 12:36:31,378 | INFO     | all payload control threads have been joined
[2025-10-12 14:37:16] 2025-10-12 12:36:31,402 | INFO     | all job control threads have been joined
[2025-10-12 14:37:16] 2025-10-12 12:36:31,446 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:31,447 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:31,469 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:31,830 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:31,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:37:16] 2025-10-12 12:36:31,928 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,323 | INFO     | [data] control thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,383 | INFO     | [payload] control thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,402 | INFO     | [job] validate thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,407 | INFO     | [job] control thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,729 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,872 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:32,968 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:33,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:37:16] 2025-10-12 12:36:33,381 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:34,124 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:36:35,919 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:37:16] 2025-10-12 12:37:00,974 | INFO     | PID=4099952 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:37:16] 2025-10-12 12:37:00,975 | INFO     | .. there are 8 such processes running
[2025-10-12 14:37:16] 2025-10-12 12:37:00,975 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:37:16] 2025-10-12 12:37:00,975 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:37:16] 2025-10-12 12:37:00,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:37:16] 2025-10-12 12:37:11,052 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:37:16] 2025-10-12 12:37:11,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841690781504)>', '<ExcThread(monitor, started 139840972646144)>']
[2025-10-12 14:37:16] 2025-10-12 12:37:12,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:37:16] 2025-10-12 12:37:12,034 | INFO     | [monitor] control thread has ended
[2025-10-12 14:37:16] 2025-10-12 12:37:16,596 | INFO     | all workflow threads have been joined
[2025-10-12 14:37:16] 2025-10-12 12:37:16,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:37:16] 2025-10-12 12:37:16,597 | INFO     | traces error code: 0
[2025-10-12 14:37:16] 2025-10-12 12:37:16,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:37:16] 2025-10-12 12:37:16,756 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:37:16] 2025-10-12 12:37:16,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:37:16] 2025-10-12 12:37:16,764 [wrapper] pilotpid: 4099952
[2025-10-12 14:37:16] 2025-10-12 12:37:16,767 [wrapper] Pilot exit status: 0
[2025-10-12 14:37:16] 2025-10-12 12:37:16,781 [wrapper] pandaids: 6830717363
[2025-10-12 14:37:16] 2025-10-12 12:37:16,864 [wrapper] cleanup supervisor_pilot   97013 4099953
[2025-10-12 14:37:16] 2025-10-12 12:37:16,869 [wrapper] Test setup, not cleaning
[2025-10-12 14:37:16] 2025-10-12 12:37:16,872 [wrapper] apfmon messages muted
[2025-10-12 14:37:16] 2025-10-12 12:37:16,876 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:37:16] 2025-10-12 12:37:16,879 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:37:16]  *** Error codes and diagnostics ***
[2025-10-12 14:37:16]     "exeErrorCode": 0,
[2025-10-12 14:37:16]     "exeErrorDiag": "",
[2025-10-12 14:37:16]     "pilotErrorCode": 0,
[2025-10-12 14:37:16]     "pilotErrorDiag": "",
[2025-10-12 14:37:16]  *** Listing of results directory ***
[2025-10-12 14:37:16] total 385308
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc    552446 Oct  5 03:43 pilot3.tar.gz
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc      5112 Oct  5 03:51 queuedata.json
[2025-10-12 14:37:16] -rwx------ 1 boinc boinc     36292 Oct  5 03:52 runpilot2-wrapper.sh
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:37:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:50 run_atlas
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:50 job.xml
[2025-10-12 14:37:16] -rw-r--r-- 2 boinc boinc 215313212 Oct 12 13:50 EVNT.46376901._002651.pool.root.1
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc      6665 Oct 12 13:50 init_data.xml
[2025-10-12 14:37:16] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:50 start_atlas.sh
[2025-10-12 14:37:16] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:50 shared
[2025-10-12 14:37:16] -rw-r--r-- 2 boinc boinc    565601 Oct 12 13:50 input.tar.gz
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:50 boinc_lockfile
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc      2519 Oct 12 13:50 pandaJob.out
[2025-10-12 14:37:16] -rw------- 1 boinc boinc    975520 Oct 12 13:51 agis_schedconf.cvmfs.json
[2025-10-12 14:37:16] -rw------- 1 boinc boinc   1560580 Oct 12 13:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:37:16] drwx------ 4 boinc boinc      4096 Oct 12 13:51 pilot3
[2025-10-12 14:37:16] -rw------- 1 boinc boinc 173802337 Oct 12 14:35 HITS.46376905._072807.pool.root.1
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:35 boinc_task_state.xml
[2025-10-12 14:37:16] -rw------- 1 boinc boinc        95 Oct 12 14:36 pilot_heartbeat.json
[2025-10-12 14:37:16] -rw------- 1 boinc boinc      1023 Oct 12 14:36 memory_monitor_summary.json
[2025-10-12 14:37:16] -rw------- 1 boinc boinc    354561 Oct 12 14:36 log.46376905._072807.job.log.tgz.1
[2025-10-12 14:37:16] -rw------- 1 boinc boinc      7784 Oct 12 14:36 heartbeat.json
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:37 wrapper_checkpoint.txt
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:37 boinc_mmap_file
[2025-10-12 14:37:16] -rw------- 1 boinc boinc      4826 Oct 12 14:37 pilotlog.txt
[2025-10-12 14:37:16] -rw------- 1 boinc boinc    418402 Oct 12 14:37 log.46376905._072807.job.log.1
[2025-10-12 14:37:16] -rw------- 1 boinc boinc       357 Oct 12 14:37 output.list
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:37 runtime_log
[2025-10-12 14:37:16] -rw------- 1 boinc boinc    788480 Oct 12 14:37 result.tar.gz
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc      8764 Oct 12 14:37 runtime_log.err
[2025-10-12 14:37:16] -rw------- 1 boinc boinc       662 Oct 12 14:37 aXyLDmN6SP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3PNNDmykRLkn.diag
[2025-10-12 14:37:16] -rw-r--r-- 1 boinc boinc     22139 Oct 12 14:37 stderr.txt
[2025-10-12 14:37:16] HITS file was successfully produced:
[2025-10-12 14:37:17] -rw------- 1 boinc boinc 173802337 Oct 12 14:35 shared/HITS.pool.root.1
[2025-10-12 14:37:17]  *** Contents of shared directory: ***
[2025-10-12 14:37:17] total 381352
[2025-10-12 14:37:17] -rw-r--r-- 2 boinc boinc 215313212 Oct 12 13:50 ATLAS.root_0
[2025-10-12 14:37:17] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:50 start_atlas.sh
[2025-10-12 14:37:17] -rw-r--r-- 2 boinc boinc    565601 Oct 12 13:50 input.tar.gz
[2025-10-12 14:37:17] -rw------- 1 boinc boinc 173802337 Oct 12 14:35 HITS.pool.root.1
[2025-10-12 14:37:17] -rw------- 1 boinc boinc    788480 Oct 12 14:37 result.tar.gz
14:37:18 (4095854): run_atlas exited; CPU time 28847.797919
14:37:18 (4095854): called boinc_finish(0)

</stderr_txt>
]]>

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