Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:53:51 (19786): wrapper (7.7.26015): starting
03:53:51 (19786): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:53:51] Arguments: --nthreads 12
[2025-10-12 03:53:51] Threads: 12
[2025-10-12 03:53:51] Checking for CVMFS
[2025-10-12 03:53:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:53:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:53:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:53:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:53:51] 2.11.2.0 14820 77951 88232 151612 2 57 14595893 20275200 1 130560 0 48466750 99.991 2485617 45564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:53:51] CVMFS is ok
[2025-10-12 03:53:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:53:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:53:51] Further information can be found at the LHC@home message board.
[2025-10-12 03:53:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:53:51] Checking for apptainer binary...
[2025-10-12 03:53:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:53:51] Running /usr/bin/apptainer --version
[2025-10-12 03:53:51] apptainer version 1.3.2-1.el7
[2025-10-12 03:53:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:53:53] c-205-27.aglt2.org
[2025-10-12 03:53:53] apptainer works
[2025-10-12 03:53:53] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:53:53] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:53:53] Starting ATLAS job with PandaID=6839317479
[2025-10-12 03:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:08:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:08:20]  replicas=None
[2025-10-12 05:08:20]  scope=mc23_13p6TeV
[2025-10-12 05:08:20]  status=None
[2025-10-12 05:08:20]  status_code=0
[2025-10-12 05:08:20]  storage_token=
[2025-10-12 05:08:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839317479/log.46676269._069518.job.log.tgz.1
[2025-10-12 05:08:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/17/log.46676269._069518.job.log.tgz.1
[2025-10-12 05:08:20]  workdir=None
[2025-10-12 05:08:20] ]
[2025-10-12 05:08:20] 2025-10-12 09:07:32,185 | INFO     | transferring file log.46676269._069518.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839317479/log.46676269._069518.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 05:08:20] 2025-10-12 09:07:32,185 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839317479/log.46676269._069518.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._069518.job
[2025-10-12 05:08:20] 2025-10-12 09:07:32,295 | INFO     | adding to output.list: log.46676269._069518.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/17/log.46676269._069518.job.log.tg
[2025-10-12 05:08:20] 2025-10-12 09:07:32,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 05:08:20] 2025-10-12 09:07:32,297 | INFO     | summary of transferred files:
[2025-10-12 05:08:20] 2025-10-12 09:07:32,297 | INFO     |  -- lfn=log.46676269._069518.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 05:08:20] 2025-10-12 09:07:32,297 | INFO     | stage-out finished correctly
[2025-10-12 05:08:20] 2025-10-12 09:07:32,384 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 05:08:20] 2025-10-12 09:07:33,407 | INFO     | time since job start (4405s) is within the limit (172800.0s)
[2025-10-12 05:08:20] 2025-10-12 09:07:34,083 | INFO     | monitor loop #328: job 0:6839317479 is in state 'finished'
[2025-10-12 05:08:20] 2025-10-12 09:07:34,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:08:20] 2025-10-12 09:07:34,857 | INFO     | job 6839317479 has state=finished
[2025-10-12 05:08:20] 2025-10-12 09:07:34,858 | INFO     | preparing for final server update for job 6839317479 in state='finished'
[2025-10-12 05:08:20] 2025-10-12 09:07:34,868 | INFO     | this job has now completed (state=finished)
[2025-10-12 05:08:20] 2025-10-12 09:07:34,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 05:08:20] 2025-10-12 09:07:34,869 | INFO     | log transfer has been attempted: DONE
[2025-10-12 05:08:20] 2025-10-12 09:07:34,869 | INFO     | job 6839317479 has finished - writing final server update
[2025-10-12 05:08:20] 2025-10-12 09:07:34,869 | INFO     | total number of processed events: 400 (read)
[2025-10-12 05:08:20] 2025-10-12 09:07:34,870 | INFO     | executing command: lscpu
[2025-10-12 05:08:20] 2025-10-12 09:07:34,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 05:08:20] 2025-10-12 09:07:35,413 | INFO     | time since job start (4407s) is within the limit (172800.0s)
[2025-10-12 05:08:20] 2025-10-12 09:07:36,587 | INFO     | monitor loop #329: job 0:6839317479 is in state 'finished'
[2025-10-12 05:08:20] 2025-10-12 09:07:36,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:08:20] 2025-10-12 09:07:37,419 | INFO     | time since job start (4409s) is within the limit (172800.0s)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,090 | INFO     | monitor loop #330: job 0:6839317479 is in state 'finished'
[2025-10-12 05:08:20] 2025-10-12 09:07:39,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,424 | INFO     | time since job start (4411s) is within the limit (172800.0s)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,575 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 05:08:20] 2025-10-12 09:07:39,578 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 05:08:20] 2025-10-12 09:07:39,580 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839317479/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,581 | INFO     | extracted standard info from prmon json
[2025-10-12 05:08:20] 2025-10-12 09:07:39,581 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:08:20] 2025-10-12 09:07:39,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:08:20] 2025-10-12 09:07:39,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:08:20] 2025-10-12 09:07:39,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:08:20] 2025-10-12 09:07:39,584 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:08:20] 2025-10-12 09:07:39,584 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,584 | INFO     | sum of deviations: -6890940152.0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,584 | INFO     | mean x: 1760257934.0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,585 | INFO     | mean y: 2767587.707692308
[2025-10-12 05:08:20] 2025-10-12 09:07:39,585 | INFO     | -- intersect: 142477909563.00626
[2025-10-12 05:08:20] 2025-10-12 09:07:39,585 | INFO     | intersect: 142477909563.00626
[2025-10-12 05:08:20] 2025-10-12 09:07:39,585 | INFO     | chi2: 0.049044671673929216
[2025-10-12 05:08:20] 2025-10-12 09:07:39,585 | INFO     | -- intersect: 142477909563.00626
[2025-10-12 05:08:20] 2025-10-12 09:07:39,586 | INFO     | current memory leak: -80.94 B/s (using 65 data points, chi2=0.05)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,586 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,586 | INFO     | ..............................
[2025-10-12 05:08:20] 2025-10-12 09:07:39,586 | INFO     | . Timing measurements:
[2025-10-12 05:08:20] 2025-10-12 09:07:39,586 | INFO     | . get job = 0 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,586 | INFO     | . initial setup = 2 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,587 | INFO     | . payload setup = 7 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,587 | INFO     | . stage-in = 0 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,587 | INFO     | . payload execution = 4375 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,587 | INFO     | . stage-out = 1 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,587 | INFO     | . log creation = 0 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,587 | INFO     | ..............................
[2025-10-12 05:08:20] 2025-10-12 09:07:39,902 | INFO     | 
[2025-10-12 05:08:20] 2025-10-12 09:07:39,902 | INFO     | job summary report
[2025-10-12 05:08:20] 2025-10-12 09:07:39,909 | INFO     | --------------------------------------------------
[2025-10-12 05:08:20] 2025-10-12 09:07:39,909 | INFO     | PanDA job id: 6839317479
[2025-10-12 05:08:20] 2025-10-12 09:07:39,909 | INFO     | task id: 46676269
[2025-10-12 05:08:20] 2025-10-12 09:07:39,909 | INFO     | errors: (none)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | pilot state: finished 
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | transexitcode: 0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | exeerrorcode: 0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | exeerrordiag: 
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | exitcode: 0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | exitmsg: OK
[2025-10-12 05:08:20] 2025-10-12 09:07:39,910 | INFO     | cpuconsumptiontime: 46290 s
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | nevents: 400
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | neventsw: 0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | pid: 30038
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | pgrp: 30038
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | corecount: 12
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | event service: False
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4386: 2375224, 4387: 2384222, 4388: 2384278, 4395: 2384600}
[2025-10-12 05:08:20] 2025-10-12 09:07:39,911 | INFO     | --------------------------------------------------
[2025-10-12 05:08:20] 2025-10-12 09:07:39,912 | INFO     | 
[2025-10-12 05:08:20] 2025-10-12 09:07:39,912 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:08:20] 2025-10-12 09:07:39,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,939 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:08:20] 2025-10-12 09:07:39,939 | INFO     | job 6839317479 has completed (purged errors)
[2025-10-12 05:08:20] 2025-10-12 09:07:39,939 | INFO     | overall cleanup function is called
[2025-10-12 05:08:20] 2025-10-12 09:07:40,947 | INFO     | --- collectZombieJob: --- 10, [30038]
[2025-10-12 05:08:20] 2025-10-12 09:07:40,948 | INFO     | zombie collector waiting for pid 30038
[2025-10-12 05:08:20] 2025-10-12 09:07:40,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:08:20] 2025-10-12 09:07:40,948 | INFO     | collected zombie processes
[2025-10-12 05:08:20] 2025-10-12 09:07:40,948 | INFO     | will attempt to kill all subprocesses of pid=30038
[2025-10-12 05:08:20] 2025-10-12 09:07:41,040 | INFO     | process IDs to be killed: [30038] (in reverse order)
[2025-10-12 05:08:20] 2025-10-12 09:07:41,164 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:08:20] 2025-10-12 09:07:41,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:08:20] 2025-10-12 09:07:41,168 | INFO     | did not find any defunct processes belonging to 30038
[2025-10-12 05:08:20] 2025-10-12 09:07:41,170 | INFO     | did not find any defunct processes belonging to 30038
[2025-10-12 05:08:20] 2025-10-12 09:07:41,171 | INFO     | ready for new job
[2025-10-12 05:08:20] 2025-10-12 09:07:41,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:08:20] 2025-10-12 09:07:41,172 | INFO     | ***************************************
[2025-10-12 05:08:20] 2025-10-12 09:07:41,172 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:08:20] 2025-10-12 09:07:41,172 | INFO     | ***************************************
[2025-10-12 05:08:20] 2025-10-12 09:07:41,172 | INFO     | 
[2025-10-12 05:08:20] 2025-10-12 09:07:41,173 | INFO     | architecture information:
[2025-10-12 05:08:20] 2025-10-12 09:07:41,173 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:08:20] 2025-10-12 09:07:41,188 | INFO     | cat /etc/os-release:
[2025-10-12 05:08:20] NAME="CentOS Linux"
[2025-10-12 05:08:20] VERSION="7 (Core)"
[2025-10-12 05:08:20] ID="centos"
[2025-10-12 05:08:20] ID_LIKE="rhel fedora"
[2025-10-12 05:08:20] VERSION_ID="7"
[2025-10-12 05:08:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:08:20] ANSI_COLOR="0;31"
[2025-10-12 05:08:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:08:20] HOME_URL="https://www.centos.org/"
[2025-10-12 05:08:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:08:20] 
[2025-10-12 05:08:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:08:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:08:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:08:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:08:20] 
[2025-10-12 05:08:20] 2025-10-12 09:07:41,189 | INFO     | ***************************************
[2025-10-12 05:08:20] 2025-10-12 09:07:41,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:08:20] 2025-10-12 09:07:41,708 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-10-12 05:08:20] 2025-10-12 09:07:41,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:08:20] 2025-10-12 09:07:41,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:08:20] 2025-10-12 09:07:41,709 | INFO     | update_server=False
[2025-10-12 05:08:20] 2025-10-12 09:07:41,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:08:20] 2025-10-12 09:07:41,842 | INFO     | all data control threads have been joined
[2025-10-12 05:08:20] 2025-10-12 09:07:42,226 | INFO     | all payload control threads have been joined
[2025-10-12 05:08:20] 2025-10-12 09:07:42,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:08:20] 2025-10-12 09:07:42,599 | INFO     | aborting loop
[2025-10-12 05:08:20] 2025-10-12 09:07:42,715 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:42,848 | INFO     | [data] control thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:42,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:08:20] 2025-10-12 09:07:42,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:08:20] 2025-10-12 09:07:42,974 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:43,204 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:43,211 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:43,217 | INFO     | all job control threads have been joined
[2025-10-12 05:08:20] 2025-10-12 09:07:43,231 | INFO     | [payload] control thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:43,349 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:43,605 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:43,870 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:44,130 | INFO     | [job] validate thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:44,178 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:44,222 | INFO     | [job] control thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:44,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:08:20] 2025-10-12 09:07:44,903 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:45,684 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:46,978 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:07:51,954 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:08:20] 2025-10-12 09:07:52,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:08:20] 2025-10-12 09:08:12,628 | INFO     | PID=23562 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 05:08:20] 2025-10-12 09:08:12,630 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:08:20] 2025-10-12 09:08:12,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:08:20] 2025-10-12 09:08:12,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:08:20] 2025-10-12 09:08:14,816 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:08:20] 2025-10-12 09:08:14,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692053112640)>', '<ExcThread(monitor, started 139691328272128)>']
[2025-10-12 05:08:20] 2025-10-12 09:08:15,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:08:20] 2025-10-12 09:08:15,645 | INFO     | [monitor] control thread has ended
[2025-10-12 05:08:20] 2025-10-12 09:08:19,999 | INFO     | all workflow threads have been joined
[2025-10-12 05:08:20] 2025-10-12 09:08:19,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:08:20] 2025-10-12 09:08:20,016 | INFO     | traces error code: 0
[2025-10-12 05:08:20] 2025-10-12 09:08:20,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:08:20] 2025-10-12 09:08:20,106 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:08:20] 2025-10-12 09:08:20,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:08:20] 2025-10-12 09:08:20,114 [wrapper] pilotpid: 23562
[2025-10-12 05:08:20] 2025-10-12 09:08:20,118 [wrapper] Pilot exit status: 0
[2025-10-12 05:08:20] 2025-10-12 09:08:20,134 [wrapper] pandaids: 6839317479
[2025-10-12 05:08:20] 2025-10-12 09:08:20,177 [wrapper] cleanup supervisor_pilot  5435 23563
[2025-10-12 05:08:20] 2025-10-12 09:08:20,181 [wrapper] Test setup, not cleaning
[2025-10-12 05:08:20] 2025-10-12 09:08:20,185 [wrapper] apfmon messages muted
[2025-10-12 05:08:20] 2025-10-12 09:08:20,189 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:08:20] 2025-10-12 09:08:20,192 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:08:20]  *** Error codes and diagnostics ***
[2025-10-12 05:08:20]     "exeErrorCode": 0,
[2025-10-12 05:08:20]     "exeErrorDiag": "",
[2025-10-12 05:08:20]     "pilotErrorCode": 0,
[2025-10-12 05:08:20]     "pilotErrorDiag": "",
[2025-10-12 05:08:20]  *** Listing of results directory ***
[2025-10-12 05:08:20] total 407568
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:49 pilot3.tar.gz
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:50 queuedata.json
[2025-10-12 05:08:20] -rwx------ 1 boincer umatlas     36292 Oct 11 22:51 runpilot2-wrapper.sh
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:08:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:53 run_atlas
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:53 job.xml
[2025-10-12 05:08:20] -rw-r--r-- 2 boincer umatlas 219357343 Oct 12 03:53 EVNT.46676267._003190.pool.root.1
[2025-10-12 05:08:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:53 start_atlas.sh
[2025-10-12 05:08:20] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:53 shared
[2025-10-12 05:08:20] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 03:53 input.tar.gz
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:53 boinc_lockfile
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 03:53 pandaJob.out
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas    975520 Oct 12 03:54 agis_schedconf.cvmfs.json
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas   1560580 Oct 12 03:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:08:20] drwx------ 5 boincer umatlas      4096 Oct 12 03:54 pilot3
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 05:03 init_data.xml
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas 192049602 Oct 12 05:07 HITS.46676269._069518.pool.root.1
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas       530 Oct 12 05:07 boinc_task_state.xml
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas      1048 Oct 12 05:07 memory_monitor_summary.json
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas    379281 Oct 12 05:07 log.46676269._069518.job.log.tgz.1
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas      7854 Oct 12 05:07 heartbeat.json
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:08 boinc_mmap_file
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:08 wrapper_checkpoint.txt
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas        95 Oct 12 05:08 pilot_heartbeat.json
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas      4818 Oct 12 05:08 pilotlog.txt
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas    640769 Oct 12 05:08 log.46676269._069518.job.log.1
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas       357 Oct 12 05:08 output.list
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:08 runtime_log
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas   1034240 Oct 12 05:08 result.tar.gz
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 05:08 runtime_log.err
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas       659 Oct 12 05:08 r3ALDm7L1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi1SMDmBs5KMn.diag
[2025-10-12 05:08:20] -rw-r--r-- 1 boincer umatlas     21804 Oct 12 05:08 stderr.txt
[2025-10-12 05:08:20] HITS file was successfully produced:
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas 192049602 Oct 12 05:07 shared/HITS.pool.root.1
[2025-10-12 05:08:20]  *** Contents of shared directory: ***
[2025-10-12 05:08:20] total 403364
[2025-10-12 05:08:20] -rw-r--r-- 2 boincer umatlas 219357343 Oct 12 03:53 ATLAS.root_0
[2025-10-12 05:08:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:53 start_atlas.sh
[2025-10-12 05:08:20] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 03:53 input.tar.gz
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas 192049602 Oct 12 05:07 HITS.pool.root.1
[2025-10-12 05:08:20] -rw------- 1 boincer umatlas   1034240 Oct 12 05:08 result.tar.gz
05:08:21 (19786): run_atlas exited; CPU time 46259.362548
05:08:21 (19786): called boinc_finish(0)

</stderr_txt>
]]>

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