Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:56:25 (1402405): wrapper (7.7.26015): starting
17:56:25 (1402405): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 17:56:25] Arguments: --nthreads 4
[2025-10-13 17:56:25] Threads: 4
[2025-10-13 17:56:25] Checking for CVMFS
[2025-10-13 17:56:25] No cvmfs_config command found, will try listing directly
[2025-10-13 17:56:25] CVMFS is ok
[2025-10-13 17:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:56:25] Further information can be found at the LHC@home message board.
[2025-10-13 17:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:56:25] Checking for apptainer binary...
[2025-10-13 17:56:25] which: no apptainer in ((null))
[2025-10-13 17:56:25] apptainer is not installed, using version from CVMFS
[2025-10-13 17:56:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:56:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-13 17:56:25] apptainer works
[2025-10-13 17:56:25] Set ATHENA_PROC_NUMBER=4
[2025-10-13 17:56:25] Set ATHENA_CORE_NUMBER=4
[2025-10-13 17:56:25] Starting ATLAS job with PandaID=6839164158
[2025-10-13 17:56:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:08:12 (1485779): wrapper (7.7.26015): starting
19:08:12 (1485779): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:08:12] Arguments: --nthreads 4
[2025-10-13 19:08:12] Threads: 4
[2025-10-13 19:08:12] This job has been restarted, cleaning up previous attempt
[2025-10-13 19:08:12] Checking for CVMFS
[2025-10-13 19:08:12] No cvmfs_config command found, will try listing directly
[2025-10-13 19:08:12] CVMFS is ok
[2025-10-13 19:08:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:08:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:08:12] Further information can be found at the LHC@home message board.
[2025-10-13 19:08:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:08:12] Checking for apptainer binary...
[2025-10-13 19:08:12] which: no apptainer in ((null))
[2025-10-13 19:08:12] apptainer is not installed, using version from CVMFS
[2025-10-13 19:08:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:08:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-13 19:08:12] apptainer works
[2025-10-13 19:08:12] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:08:12] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:08:12] Starting ATLAS job with PandaID=6839164158
[2025-10-13 19:08:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:56:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:56:07] 2025-10-13 19:50:48,578 | INFO     | chi2: 0.0016671011322079024
[2025-10-13 21:56:07] 2025-10-13 19:50:48,578 | INFO     | current chi2=0.0016671011322079024 (change=99.85921526987 %)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,578 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,579 | INFO     | sum of deviations: 2964421148.0000005
[2025-10-13 21:56:07] 2025-10-13 19:50:48,582 | INFO     | mean x: 1760380468.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,582 | INFO     | mean y: 2328289.2818791945
[2025-10-13 21:56:07] 2025-10-13 19:50:48,582 | INFO     | -- intersect: -5085457023.482159
[2025-10-13 21:56:07] 2025-10-13 19:50:48,582 | INFO     | intersect: -5085457023.482159
[2025-10-13 21:56:07] 2025-10-13 19:50:48,582 | INFO     | chi2: 0.0012047040844880806
[2025-10-13 21:56:07] 2025-10-13 19:50:48,583 | INFO     | current chi2=0.0012047040844880806 (change=27.73659250698396 %)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,583 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | sum of deviations: 2151279741.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | mean x: 1760380620.5
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | mean y: 2329529.4305555555
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | -- intersect: -4088002006.427195
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | intersect: -4088002006.427195
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | chi2: 0.0006264081008863433
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | current chi2=0.0006264081008863433 (change=48.003156214704354 %)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,584 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,585 | INFO     | sum of deviations: 1613859249.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,585 | INFO     | mean x: 1760380773.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,585 | INFO     | mean y: 2330409.2661870504
[2025-10-13 21:56:07] 2025-10-13 19:50:48,585 | INFO     | -- intersect: -3409378155.3685484
[2025-10-13 21:56:07] 2025-10-13 19:50:48,585 | INFO     | intersect: -3409378155.3685484
[2025-10-13 21:56:07] 2025-10-13 19:50:48,586 | INFO     | chi2: 0.00039757480152033707
[2025-10-13 21:56:07] 2025-10-13 19:50:48,586 | INFO     | current chi2=0.00039757480152033707 (change=36.53102490887585 %)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,586 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | sum of deviations: 1218808792.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | mean x: 1760380925.5
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | mean y: 2331098.970149254
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | -- intersect: -2873567708.5892305
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | intersect: -2873567708.5892305
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | chi2: 0.000220045264398202
[2025-10-13 21:56:07] 2025-10-13 19:50:48,587 | INFO     | current chi2=0.000220045264398202 (change=44.653115952836345 %)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,588 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,588 | INFO     | sum of deviations: 1045295206.9999999
[2025-10-13 21:56:07] 2025-10-13 19:50:48,588 | INFO     | mean x: 1760381078.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,588 | INFO     | mean y: 2331427.534883721
[2025-10-13 21:56:07] 2025-10-13 19:50:48,589 | INFO     | -- intersect: -2762216952.5178657
[2025-10-13 21:56:07] 2025-10-13 19:50:48,589 | INFO     | intersect: -2762216952.5178657
[2025-10-13 21:56:07] 2025-10-13 19:50:48,589 | INFO     | chi2: 0.00021528328384940807
[2025-10-13 21:56:07] 2025-10-13 19:50:48,589 | INFO     | current chi2=0.00021528328384940807 (change=2.1640913572111558 %)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,589 | INFO     | left removable region: 60
[2025-10-13 21:56:07] 2025-10-13 19:50:48,589 | INFO     | sum of square deviations: 249388862.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,590 | INFO     | sum of deviations: 202722520.0000001
[2025-10-13 21:56:07] 2025-10-13 19:50:48,590 | INFO     | mean x: 1760381810.0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,590 | INFO     | mean y: 2333411.3333333335
[2025-10-13 21:56:07] 2025-10-13 19:50:48,590 | INFO     | -- intersect: -1428640826.3427718
[2025-10-13 21:56:07] 2025-10-13 19:50:48,590 | INFO     | intersect: -1428640826.3427718
[2025-10-13 21:56:07] 2025-10-13 19:50:48,591 | INFO     | chi2: 0.00013928684147735857
[2025-10-13 21:56:07] 2025-10-13 19:50:48,591 | INFO     | -- intersect: -1428640826.3427718
[2025-10-13 21:56:07] 2025-10-13 19:50:48,591 | INFO     | current memory leak: 0.81 B/s (using 93 data points, chi2=0.00)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | could have reported an average CPU frequency of 2740 MHz (9 samples)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | ..............................
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | . Timing measurements:
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | . get job = 0 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | . initial setup = 1 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | . payload setup = 9 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | . stage-in = 0 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,592 | INFO     | . payload execution = 9695 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,593 | INFO     | . stage-out = 1 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,593 | INFO     | . log creation = 0 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,593 | INFO     | ..............................
[2025-10-13 21:56:07] 2025-10-13 19:50:48,693 | INFO     | 
[2025-10-13 21:56:07] 2025-10-13 19:50:48,694 | INFO     | job summary report
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | --------------------------------------------------
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | PanDA job id: 6839164158
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | task id: 46676269
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | errors: (none)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | pilot state: finished 
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | transexitcode: 0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,695 | INFO     | exeerrorcode: 0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | exeerrordiag: 
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | exitcode: 0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | exitmsg: OK
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | cpuconsumptiontime: 37646 s
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | nevents: 400
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | neventsw: 0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | pid: 1560718
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | pgrp: 1560718
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | corecount: 4
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | event service: False
[2025-10-13 21:56:07] 2025-10-13 19:50:48,696 | INFO     | sizes: {0: 2348698, 1: 2348897, 8: 2349159, 11: 2349187, 9709: 2378155, 9711: 2387177, 9713: 2387361, 9722: 2387619}
[2025-10-13 21:56:07] 2025-10-13 19:50:48,697 | INFO     | --------------------------------------------------
[2025-10-13 21:56:07] 2025-10-13 19:50:48,697 | INFO     | 
[2025-10-13 21:56:07] 2025-10-13 19:50:48,697 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-10-13 21:56:07] 2025-10-13 19:50:48,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | job 6839164158 has completed (purged errors)
[2025-10-13 21:56:07] 2025-10-13 19:50:48,731 | INFO     | overall cleanup function is called
[2025-10-13 21:56:07] 2025-10-13 19:50:49,411 | INFO     | PID=1506653 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 21:56:07] 2025-10-13 19:50:49,411 | INFO     | .. there are 8 such processes running
[2025-10-13 21:56:07] 2025-10-13 19:50:49,743 | INFO     | --- collectZombieJob: --- 10, [1560718]
[2025-10-13 21:56:07] 2025-10-13 19:50:49,743 | INFO     | zombie collector waiting for pid 1560718
[2025-10-13 21:56:07] 2025-10-13 19:50:49,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:56:07] 2025-10-13 19:50:49,743 | INFO     | collected zombie processes
[2025-10-13 21:56:07] 2025-10-13 19:50:49,743 | INFO     | will attempt to kill all subprocesses of pid=1560718
[2025-10-13 21:56:07] 2025-10-13 19:50:50,513 | INFO     | process IDs to be killed: [1560718] (in reverse order)
[2025-10-13 21:56:07] 2025-10-13 19:50:50,779 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:56:07] 2025-10-13 19:50:50,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:56:07] 2025-10-13 19:50:50,813 | INFO     | did not find any defunct processes belonging to 1560718
[2025-10-13 21:56:07] 2025-10-13 19:50:50,846 | INFO     | did not find any defunct processes belonging to 1560718
[2025-10-13 21:56:07] 2025-10-13 19:50:50,846 | INFO     | ready for new job
[2025-10-13 21:56:07] 2025-10-13 19:50:50,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:56:07] 2025-10-13 19:50:50,849 | INFO     | ***************************************
[2025-10-13 21:56:07] 2025-10-13 19:50:50,849 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:56:07] 2025-10-13 19:50:50,849 | INFO     | ***************************************
[2025-10-13 21:56:07] 2025-10-13 19:50:50,849 | INFO     | 
[2025-10-13 21:56:07] 2025-10-13 19:50:50,857 | INFO     | architecture information:
[2025-10-13 21:56:07] 2025-10-13 19:50:50,857 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:56:07] 2025-10-13 19:50:50,879 | INFO     | cat /etc/os-release:
[2025-10-13 21:56:07] NAME="CentOS Linux"
[2025-10-13 21:56:07] VERSION="7 (Core)"
[2025-10-13 21:56:07] ID="centos"
[2025-10-13 21:56:07] ID_LIKE="rhel fedora"
[2025-10-13 21:56:07] VERSION_ID="7"
[2025-10-13 21:56:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:56:07] ANSI_COLOR="0;31"
[2025-10-13 21:56:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:56:07] HOME_URL="https://www.centos.org/"
[2025-10-13 21:56:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:56:07] 
[2025-10-13 21:56:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:56:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:56:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:56:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:56:07] 
[2025-10-13 21:56:07] 2025-10-13 19:50:50,879 | INFO     | ***************************************
[2025-10-13 21:56:07] 2025-10-13 19:50:51,382 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-10-13 21:56:07] 2025-10-13 19:50:51,407 | INFO     | sufficient remaining disk space (3340075270144 B)
[2025-10-13 21:56:07] 2025-10-13 19:50:51,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:56:07] 2025-10-13 19:50:51,407 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:56:07] 2025-10-13 19:50:51,408 | INFO     | update_server=False
[2025-10-13 21:56:07] 2025-10-13 19:50:51,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:56:07] 2025-10-13 19:50:51,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:56:07] 2025-10-13 19:50:51,681 | INFO     | all job control threads have been joined
[2025-10-13 21:56:07] 2025-10-13 19:50:51,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:56:07] 2025-10-13 19:50:51,924 | INFO     | aborting loop
[2025-10-13 21:56:07] 2025-10-13 19:50:52,127 | INFO     | all data control threads have been joined
[2025-10-13 21:56:07] 2025-10-13 19:50:52,413 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,511 | INFO     | all payload control threads have been joined
[2025-10-13 21:56:07] 2025-10-13 19:50:52,687 | INFO     | [job] control thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,765 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,838 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,843 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,854 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,929 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:52,944 | INFO     | [job] validate thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,132 | INFO     | [data] control thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,162 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,185 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,414 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,516 | INFO     | [payload] control thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:53,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:56:07] 2025-10-13 19:50:54,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:56:07] 2025-10-13 19:50:54,709 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:50:58,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:56:07] 2025-10-13 19:51:22,472 | INFO     | PID=1506653 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:56:07] 2025-10-13 19:51:22,475 | INFO     | .. there are 8 such processes running
[2025-10-13 21:56:07] 2025-10-13 19:51:22,476 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:56:07] 2025-10-13 19:51:22,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:56:07] 2025-10-13 19:51:22,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:56:07] 2025-10-13 19:51:44,262 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:56:07] 2025-10-13 19:51:45,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22492551432000)>', '<ExcThread(monitor, started 22492313773824)>']
[2025-10-13 21:56:07] 2025-10-13 19:51:45,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:56:07] 2025-10-13 19:51:45,583 | INFO     | [monitor] control thread has ended
[2025-10-13 21:56:07] 2025-10-13 19:51:50,443 | INFO     | all workflow threads have been joined
[2025-10-13 21:56:07] 2025-10-13 19:51:50,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:56:07] 2025-10-13 19:51:50,444 | INFO     | traces error code: 0
[2025-10-13 21:56:07] 2025-10-13 19:51:50,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:56:07] 2025-10-13 19:51:50,600 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:56:07] 2025-10-13 19:51:50,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:56:07] 2025-10-13 19:51:50,609 [wrapper] pilotpid: 1506653
[2025-10-13 21:56:07] 2025-10-13 19:51:50,613 [wrapper] Pilot exit status: 0
[2025-10-13 21:56:07] 2025-10-13 19:51:50,627 [wrapper] pandaids: 6839164158 6839164158
[2025-10-13 21:56:07] 2025-10-13 19:51:50,754 [wrapper] cleanup supervisor_pilot 2020712 1506657
[2025-10-13 21:56:07] 2025-10-13 19:51:50,757 [wrapper] Test setup, not cleaning
[2025-10-13 21:56:07] 2025-10-13 19:51:50,761 [wrapper] apfmon messages muted
[2025-10-13 21:56:07] 2025-10-13 19:51:50,769 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:56:07] 2025-10-13 19:51:50,772 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:56:07]  *** Error codes and diagnostics ***
[2025-10-13 21:56:07]     "exeErrorCode": 0,
[2025-10-13 21:56:07]     "exeErrorDiag": "",
[2025-10-13 21:56:07]     "pilotErrorCode": 0,
[2025-10-13 21:56:07]     "pilotErrorDiag": "",
[2025-10-13 21:56:07]  *** Listing of results directory ***
[2025-10-13 21:56:07] total 640260
[2025-10-13 21:56:07] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:30 queuedata.json
[2025-10-13 21:56:07] -rwx------ 1 boinc boinc     36292 Oct 12 02:31 runpilot2-wrapper.sh
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:56:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:56 run_atlas
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:56 job.xml
[2025-10-13 21:56:07] -rw-r--r-- 3 boinc boinc 224257440 Oct 13 17:56 EVNT.46676267._002872.pool.root.1
[2025-10-13 21:56:07] -rw-r--r-- 3 boinc boinc 224257440 Oct 13 17:56 ATLAS.root_0
[2025-10-13 21:56:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:56 start_atlas.sh
[2025-10-13 21:56:07] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:56 shared
[2025-10-13 21:56:07] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:56 input.tar.gz
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:56 boinc_lockfile
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc      6693 Oct 13 19:08 init_data.xml
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:08 pandaJob.out
[2025-10-13 21:56:07] -rw------- 1 boinc boinc    972783 Oct 13 19:08 agis_schedconf.cvmfs.json
[2025-10-13 21:56:07] -rw------- 1 boinc boinc 199764562 Oct 13 21:50 HITS.46676269._067747.pool.root.1
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:50 boinc_task_state.xml
[2025-10-13 21:56:07] -rw------- 1 boinc boinc      1026 Oct 13 21:50 memory_monitor_summary.json
[2025-10-13 21:56:07] -rw------- 1 boinc boinc   1560580 Oct 13 21:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:56:07] -rw------- 1 boinc boinc    351968 Oct 13 21:50 log.46676269._067747.job.log.tgz.1
[2025-10-13 21:56:07] -rw------- 1 boinc boinc      7784 Oct 13 21:50 heartbeat.json
[2025-10-13 21:56:07] -rw------- 1 boinc boinc        97 Oct 13 21:51 pilot_heartbeat.json
[2025-10-13 21:56:07] -rw------- 1 boinc boinc      4835 Oct 13 21:51 pilotlog.txt
[2025-10-13 21:56:07] -rw------- 1 boinc boinc   1365974 Oct 13 21:51 log.46676269._067747.job.log.1
[2025-10-13 21:56:07] -rw------- 1 boinc boinc       357 Oct 13 21:51 output.list
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:51 runtime_log
[2025-10-13 21:56:07] -rw------- 1 boinc boinc   1740800 Oct 13 21:51 result.tar.gz
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc      9161 Oct 13 21:51 runtime_log.err
[2025-10-13 21:56:07] -rw------- 1 boinc boinc       789 Oct 13 21:51 nLfNDm0AzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme4hNDma1NdIo.diag
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc        26 Oct 13 21:56 wrapper_checkpoint.txt
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:56 boinc_mmap_file
[2025-10-13 21:56:07] -rw-r--r-- 1 boinc boinc     22804 Oct 13 21:56 stderr.txt
[2025-10-13 21:56:07] HITS file was successfully produced:
[2025-10-13 21:56:07] -rw------- 1 boinc boinc 199764562 Oct 13 21:50 shared/HITS.pool.root.1
[2025-10-13 21:56:07]  *** Contents of shared directory: ***
[2025-10-13 21:56:07] total 416372
[2025-10-13 21:56:07] -rw-r--r-- 3 boinc boinc 224257440 Oct 13 17:56 ATLAS.root_0
[2025-10-13 21:56:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:56 start_atlas.sh
[2025-10-13 21:56:07] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:56 input.tar.gz
[2025-10-13 21:56:07] -rw------- 1 boinc boinc 199764562 Oct 13 21:50 HITS.pool.root.1
[2025-10-13 21:56:07] -rw------- 1 boinc boinc   1740800 Oct 13 21:51 result.tar.gz
21:56:08 (1485779): run_atlas exited; CPU time 38289.354275
21:56:08 (1485779): called boinc_finish(0)

</stderr_txt>
]]>

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