Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:43 (470693): wrapper (7.7.26015): starting
04:53:43 (470693): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 04:53:43] Arguments: --nthreads 9
[2025-10-12 04:53:43] Threads: 9
[2025-10-12 04:53:43] Checking for CVMFS
[2025-10-12 04:53:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:53:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:53:44] 2.13.2.0 1615359 90468 453388 151613 1 433 39905192 40960000 16690 16776704 0 242733980 99.666 227556056 35400 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 04:53:44] CVMFS is ok
[2025-10-12 04:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:53:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:53:44] Further information can be found at the LHC@home message board.
[2025-10-12 04:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:53:44] Checking for apptainer binary...
[2025-10-12 04:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:53:44] Running /usr/bin/apptainer --version
[2025-10-12 04:53:44] apptainer version 1.4.3-1.el9
[2025-10-12 04:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:53:44] c-206-36.aglt2.org
[2025-10-12 04:53:44] apptainer works
[2025-10-12 04:53:44] Set ATHENA_PROC_NUMBER=9
[2025-10-12 04:53:44] Set ATHENA_CORE_NUMBER=9
[2025-10-12 04:53:44] Starting ATLAS job with PandaID=6839317672
[2025-10-12 04:53:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:11:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:11:23] 2025-10-12 11:10:24,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:11:23] 2025-10-12 11:10:24,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:11:23] 2025-10-12 11:10:24,049 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:11:23] 2025-10-12 11:10:24,049 | INFO     | sum of square deviations: 746037663.0223856
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | sum of deviations: -9580045263.925379
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | mean x: 1760263341.5597014
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | mean y: 2577413.8656716417
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | -- intersect: 22606533386.0784
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | intersect: 22606533386.0784
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | chi2: 2.2749526202549886
[2025-10-12 07:11:23] 2025-10-12 11:10:24,050 | INFO     | sum of square deviations: 665601385.5038763
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | sum of deviations: -797965711.0465133
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | mean x: 1760263189.0620155
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | mean y: 2593569.2558139535
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | -- intersect: 2112910191.0061364
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | intersect: 2112910191.0061364
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | chi2: 1.5991141805089135
[2025-10-12 07:11:23] 2025-10-12 11:10:24,051 | INFO     | current chi2=1.5991141805089135 (change=29.70780286713503 %)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,052 | INFO     | sum of square deviations: 591165220.4838698
[2025-10-12 07:11:23] 2025-10-12 11:10:24,052 | INFO     | sum of deviations: -818492942.1129031
[2025-10-12 07:11:23] 2025-10-12 11:10:24,052 | INFO     | mean x: 1760263036.564516
[2025-10-12 07:11:23] 2025-10-12 11:10:24,052 | INFO     | mean y: 2593527.2016129033
[2025-10-12 07:11:23] 2025-10-12 11:10:24,052 | INFO     | -- intersect: 2439751231.6264715
[2025-10-12 07:11:23] 2025-10-12 11:10:24,052 | INFO     | intersect: 2439751231.6264715
[2025-10-12 07:11:23] 2025-10-12 11:10:24,053 | INFO     | chi2: 1.598541903615053
[2025-10-12 07:11:23] 2025-10-12 11:10:24,053 | INFO     | current chi2=1.598541903615053 (change=0.03578711894596534 %)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,053 | INFO     | right removable region: 123
[2025-10-12 07:11:23] 2025-10-12 11:10:24,053 | INFO     | sum of square deviations: 665596505.5038763
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | sum of deviations: -26359543547.263565
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | mean x: 1760263494.0620155
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | mean y: 2608419.7829457363
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | -- intersect: 69714125596.785
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | intersect: 69714125596.785
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | chi2: 0.8965305088701122
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | current chi2=0.8965305088701122 (change=60.59124480712814 %)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,059 | INFO     | sum of square deviations: 591155460.4838698
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | sum of deviations: -20086364149.45161
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | mean x: 1760263646.564516
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | mean y: 2595544.806451613
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | -- intersect: 59813083593.07038
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | intersect: 59813083593.07038
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | chi2: 0.8675725412635901
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | current chi2=0.8675725412635901 (change=3.230003588279171 %)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,060 | INFO     | left removable region: 20
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | sum of square deviations: 338786565.3786412
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | sum of deviations: 1035235279.6116505
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | mean x: 1760263616.0776699
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | mean y: 2580376.0485436893
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | -- intersect: -5376284027.100742
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | intersect: -5376284027.100742
[2025-10-12 07:11:23] 2025-10-12 11:10:24,061 | INFO     | chi2: 0.0001501083396039297
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | -- intersect: -5376284027.100742
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | current memory leak: 3.06 B/s (using 103 data points, chi2=0.00)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | could have reported an average CPU frequency of 3219 MHz (8 samples)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | ..............................
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | . Timing measurements:
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | . get job = 0 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | . initial setup = 2 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | . payload setup = 9 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,062 | INFO     | . stage-in = 0 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,073 | INFO     | . payload execution = 8136 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,073 | INFO     | . stage-out = 1 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,073 | INFO     | . log creation = 0 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,073 | INFO     | ..............................
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | 
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | job summary report
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | --------------------------------------------------
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | PanDA job id: 6839317672
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | task id: 46676269
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | errors: (none)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | pilot state: finished 
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | transexitcode: 0
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | exeerrorcode: 0
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | exeerrordiag: 
[2025-10-12 07:11:23] 2025-10-12 11:10:24,247 | INFO     | exitcode: 0
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | exitmsg: OK
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | cpuconsumptiontime: 33897 s
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | nevents: 400
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | neventsw: 0
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | pid: 480805
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | pgrp: 480805
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | corecount: 9
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | event service: False
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | sizes: {0: 2348857, 1: 2348857, 9: 2349147, 11: 2349175, 8149: 2377026, 8150: 2377025, 8152: 2386207, 8155: 2386263, 8160: 2386457}
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | --------------------------------------------------
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | 
[2025-10-12 07:11:23] 2025-10-12 11:10:24,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 07:11:23] 2025-10-12 11:10:24,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:11:23] 2025-10-12 11:10:24,284 | INFO     | job 6839317672 has completed (purged errors)
[2025-10-12 07:11:23] 2025-10-12 11:10:24,284 | INFO     | overall cleanup function is called
[2025-10-12 07:11:23] 2025-10-12 11:10:25,292 | INFO     | --- collectZombieJob: --- 10, [480805]
[2025-10-12 07:11:23] 2025-10-12 11:10:25,293 | INFO     | zombie collector waiting for pid 480805
[2025-10-12 07:11:23] 2025-10-12 11:10:25,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:11:23] 2025-10-12 11:10:25,293 | INFO     | collected zombie processes
[2025-10-12 07:11:23] 2025-10-12 11:10:25,293 | INFO     | will attempt to kill all subprocesses of pid=480805
[2025-10-12 07:11:23] 2025-10-12 11:10:25,563 | INFO     | process IDs to be killed: [480805] (in reverse order)
[2025-10-12 07:11:23] 2025-10-12 11:10:25,672 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:11:23] 2025-10-12 11:10:25,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:11:23] 2025-10-12 11:10:25,685 | INFO     | did not find any defunct processes belonging to 480805
[2025-10-12 07:11:23] 2025-10-12 11:10:25,698 | INFO     | did not find any defunct processes belonging to 480805
[2025-10-12 07:11:23] 2025-10-12 11:10:25,698 | INFO     | ready for new job
[2025-10-12 07:11:23] 2025-10-12 11:10:25,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:11:23] 2025-10-12 11:10:25,700 | INFO     | ***************************************
[2025-10-12 07:11:23] 2025-10-12 11:10:25,700 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:11:23] 2025-10-12 11:10:25,700 | INFO     | ***************************************
[2025-10-12 07:11:23] 2025-10-12 11:10:25,700 | INFO     | 
[2025-10-12 07:11:23] 2025-10-12 11:10:25,704 | INFO     | architecture information:
[2025-10-12 07:11:23] 2025-10-12 11:10:25,704 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:11:23] 2025-10-12 11:10:25,723 | INFO     | cat /etc/os-release:
[2025-10-12 07:11:23] NAME="CentOS Linux"
[2025-10-12 07:11:23] VERSION="7 (Core)"
[2025-10-12 07:11:23] ID="centos"
[2025-10-12 07:11:23] ID_LIKE="rhel fedora"
[2025-10-12 07:11:23] VERSION_ID="7"
[2025-10-12 07:11:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:11:23] ANSI_COLOR="0;31"
[2025-10-12 07:11:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:11:23] HOME_URL="https://www.centos.org/"
[2025-10-12 07:11:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:11:23] 
[2025-10-12 07:11:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:11:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:11:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:11:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:11:23] 
[2025-10-12 07:11:23] 2025-10-12 11:10:25,723 | INFO     | ***************************************
[2025-10-12 07:11:23] 2025-10-12 11:10:26,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 07:11:23] 2025-10-12 11:10:26,257 | INFO     | sufficient remaining disk space (84959821824 B)
[2025-10-12 07:11:23] 2025-10-12 11:10:26,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:11:23] 2025-10-12 11:10:26,258 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:11:23] 2025-10-12 11:10:26,258 | INFO     | update_server=False
[2025-10-12 07:11:23] 2025-10-12 11:10:26,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:11:23] 2025-10-12 11:10:26,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:11:23] 2025-10-12 11:10:26,258 | INFO     | aborting loop
[2025-10-12 07:11:23] 2025-10-12 11:10:26,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:11:23] 2025-10-12 11:10:27,063 | INFO     | all data control threads have been joined
[2025-10-12 07:11:23] 2025-10-12 11:10:27,168 | INFO     | all job control threads have been joined
[2025-10-12 07:11:23] 2025-10-12 11:10:27,263 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:27,264 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:27,441 | INFO     | all payload control threads have been joined
[2025-10-12 07:11:23] 2025-10-12 11:10:27,657 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:27,738 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:27,913 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,077 | INFO     | [data] control thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,174 | INFO     | [job] control thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,303 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,346 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,446 | INFO     | [payload] control thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,477 | INFO     | [job] validate thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,598 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:28,787 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:29,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:11:23] 2025-10-12 11:10:29,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:11:23] 2025-10-12 11:10:30,265 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:33,562 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:36,458 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:11:23] 2025-10-12 11:10:37,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:11:23] 2025-10-12 11:10:56,779 | INFO     | PID=474385 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 07:11:23] 2025-10-12 11:10:56,779 | INFO     | .. there are 17 such processes running
[2025-10-12 07:11:23] 2025-10-12 11:10:56,780 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:11:23] 2025-10-12 11:10:56,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:11:23] 2025-10-12 11:10:56,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:11:23] 2025-10-12 11:11:16,384 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:11:23] 2025-10-12 11:11:18,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958349166400)>', '<ExcThread(monitor, started 139957834323712)>']
[2025-10-12 07:11:23] 2025-10-12 11:11:18,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:11:23] 2025-10-12 11:11:18,908 | INFO     | [monitor] control thread has ended
[2025-10-12 07:11:23] 2025-10-12 11:11:23,319 | INFO     | all workflow threads have been joined
[2025-10-12 07:11:23] 2025-10-12 11:11:23,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:11:23] 2025-10-12 11:11:23,319 | INFO     | traces error code: 0
[2025-10-12 07:11:23] 2025-10-12 11:11:23,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:11:23] 2025-10-12 11:11:23,660 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:11:23] 2025-10-12 11:11:23,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:11:23] 2025-10-12 11:11:23,668 [wrapper] pilotpid: 474385
[2025-10-12 07:11:23] 2025-10-12 11:11:23,670 [wrapper] Pilot exit status: 0
[2025-10-12 07:11:23] 2025-10-12 11:11:23,685 [wrapper] pandaids: 6839317672
[2025-10-12 07:11:23] 2025-10-12 11:11:23,766 [wrapper] cleanup supervisor_pilot  760105 474386
[2025-10-12 07:11:23] 2025-10-12 11:11:23,769 [wrapper] Test setup, not cleaning
[2025-10-12 07:11:23] 2025-10-12 11:11:23,772 [wrapper] apfmon messages muted
[2025-10-12 07:11:23] 2025-10-12 11:11:23,776 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:11:23] 2025-10-12 11:11:23,780 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:11:23]  *** Error codes and diagnostics ***
[2025-10-12 07:11:23]     "exeErrorCode": 0,
[2025-10-12 07:11:23]     "exeErrorDiag": "",
[2025-10-12 07:11:23]     "pilotErrorCode": 0,
[2025-10-12 07:11:23]     "pilotErrorDiag": "",
[2025-10-12 07:11:23]  *** Listing of results directory ***
[2025-10-12 07:11:23] total 423636
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:00 queuedata.json
[2025-10-12 07:11:23] -rwx------. 1 boincer umatlas     36292 Oct 11 23:00 runpilot2-wrapper.sh
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas       100 Oct 12 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:11:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 04:53 run_atlas
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas       105 Oct 12 04:53 job.xml
[2025-10-12 07:11:23] -rw-r--r--. 2 boincer umatlas 223691942 Oct 12 04:53 EVNT.46676267._003198.pool.root.1
[2025-10-12 07:11:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:53 start_atlas.sh
[2025-10-12 07:11:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 04:53 shared
[2025-10-12 07:11:23] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 04:53 input.tar.gz
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas         0 Oct 12 04:53 boinc_lockfile
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 04:53 pandaJob.out
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas    975520 Oct 12 04:54 agis_schedconf.cvmfs.json
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas   1560580 Oct 12 04:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:11:23] drwx------. 5 boincer umatlas      4096 Oct 12 04:54 pilot3
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas      6899 Oct 12 07:01 init_data.xml
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas 203145336 Oct 12 07:09 HITS.46676269._069711.pool.root.1
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas       529 Oct 12 07:09 boinc_task_state.xml
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas      1035 Oct 12 07:10 memory_monitor_summary.json
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas    383676 Oct 12 07:10 log.46676269._069711.job.log.tgz.1
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas      7773 Oct 12 07:10 heartbeat.json
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas        95 Oct 12 07:10 pilot_heartbeat.json
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas        27 Oct 12 07:11 wrapper_checkpoint.txt
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:11 boinc_mmap_file
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas      4895 Oct 12 07:11 pilotlog.txt
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas   1147282 Oct 12 07:11 log.46676269._069711.job.log.1
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas       357 Oct 12 07:11 output.list
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:11 runtime_log
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas   1546240 Oct 12 07:11 result.tar.gz
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 07:11 runtime_log.err
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas       653 Oct 12 07:11 0B7LDmFV1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmc3SMDma4La9n.diag
[2025-10-12 07:11:23] -rw-r--r--. 1 boincer umatlas     20971 Oct 12 07:11 stderr.txt
[2025-10-12 07:11:23] HITS file was successfully produced:
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas 203145336 Oct 12 07:09 shared/HITS.pool.root.1
[2025-10-12 07:11:23]  *** Contents of shared directory: ***
[2025-10-12 07:11:23] total 418932
[2025-10-12 07:11:23] -rw-r--r--. 2 boincer umatlas 223691942 Oct 12 04:53 ATLAS.root_0
[2025-10-12 07:11:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:53 start_atlas.sh
[2025-10-12 07:11:23] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 04:53 input.tar.gz
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas 203145336 Oct 12 07:09 HITS.pool.root.1
[2025-10-12 07:11:23] -rw-------. 1 boincer umatlas   1546240 Oct 12 07:11 result.tar.gz
07:11:25 (470693): run_atlas exited; CPU time 33974.452107
07:11:25 (470693): called boinc_finish(0)

</stderr_txt>
]]>

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