Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:48:49 (8696): wrapper (7.7.26015): starting
03:48:49 (8696): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:48:49] Arguments: --nthreads 12
[2025-10-12 03:48:49] Threads: 12
[2025-10-12 03:48:49] Checking for CVMFS
[2025-10-12 03:48:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:48:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:48:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:48:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:48:49] 2.11.2.0 723 52549 85880 151612 1 57 12928202 20275201 1 130560 0 29325232 99.956 2374346 32765 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:48:49] CVMFS is ok
[2025-10-12 03:48:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:48:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:48:49] Further information can be found at the LHC@home message board.
[2025-10-12 03:48:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:48:49] Checking for apptainer binary...
[2025-10-12 03:48:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:48:49] Running /usr/bin/apptainer --version
[2025-10-12 03:48:49] apptainer version 1.3.2-1.el7
[2025-10-12 03:48:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:48:51] c-205-1.aglt2.org
[2025-10-12 03:48:51] apptainer works
[2025-10-12 03:48:51] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:48:51] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:48:51] Starting ATLAS job with PandaID=6839588765
[2025-10-12 03:48:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:02:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:02:19]  scope=mc23_13p6TeV
[2025-10-12 05:02:19]  status=None
[2025-10-12 05:02:19]  status_code=0
[2025-10-12 05:02:19]  storage_token=
[2025-10-12 05:02:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839588765/log.46676269._071957.job.log.tgz.1
[2025-10-12 05:02:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/fa/log.46676269._071957.job.log.tgz.1
[2025-10-12 05:02:19]  workdir=None
[2025-10-12 05:02:19] ]
[2025-10-12 05:02:19] 2025-10-12 09:01:17,658 | INFO     | transferring file log.46676269._071957.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839588765/log.46676269._071957.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 05:02:19] 2025-10-12 09:01:17,659 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839588765/log.46676269._071957.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._071957.job
[2025-10-12 05:02:19] 2025-10-12 09:01:17,681 | INFO     | adding to output.list: log.46676269._071957.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/fa/log.46676269._071957.job.log.tg
[2025-10-12 05:02:19] 2025-10-12 09:01:17,682 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 05:02:19] 2025-10-12 09:01:17,683 | INFO     | summary of transferred files:
[2025-10-12 05:02:19] 2025-10-12 09:01:17,683 | INFO     |  -- lfn=log.46676269._071957.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 05:02:19] 2025-10-12 09:01:17,683 | INFO     | stage-out finished correctly
[2025-10-12 05:02:19] 2025-10-12 09:01:17,934 | INFO     | time since job start (4331s) is within the limit (172800.0s)
[2025-10-12 05:02:19] 2025-10-12 09:01:18,315 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 05:02:19] 2025-10-12 09:01:19,940 | INFO     | time since job start (4333s) is within the limit (172800.0s)
[2025-10-12 05:02:19] 2025-10-12 09:01:20,116 | INFO     | monitor loop #324: job 0:6839588765 is in state 'finished'
[2025-10-12 05:02:19] 2025-10-12 09:01:20,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:02:19] 2025-10-12 09:01:20,642 | INFO     | job 6839588765 has state=finished
[2025-10-12 05:02:19] 2025-10-12 09:01:20,642 | INFO     | preparing for final server update for job 6839588765 in state='finished'
[2025-10-12 05:02:19] 2025-10-12 09:01:20,642 | INFO     | this job has now completed (state=finished)
[2025-10-12 05:02:19] 2025-10-12 09:01:20,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 05:02:19] 2025-10-12 09:01:20,643 | INFO     | log transfer has been attempted: DONE
[2025-10-12 05:02:19] 2025-10-12 09:01:20,643 | INFO     | job 6839588765 has finished - writing final server update
[2025-10-12 05:02:19] 2025-10-12 09:01:20,643 | INFO     | total number of processed events: 400 (read)
[2025-10-12 05:02:19] 2025-10-12 09:01:20,646 | INFO     | executing command: lscpu
[2025-10-12 05:02:19] 2025-10-12 09:01:20,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 05:02:19] 2025-10-12 09:01:21,945 | INFO     | time since job start (4335s) is within the limit (172800.0s)
[2025-10-12 05:02:19] 2025-10-12 09:01:22,619 | INFO     | monitor loop #325: job 0:6839588765 is in state 'finished'
[2025-10-12 05:02:19] 2025-10-12 09:01:22,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:02:19] 2025-10-12 09:01:23,951 | INFO     | time since job start (4337s) is within the limit (172800.0s)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,122 | INFO     | monitor loop #326: job 0:6839588765 is in state 'finished'
[2025-10-12 05:02:19] 2025-10-12 09:01:25,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,403 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 05:02:19] 2025-10-12 09:01:25,406 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-12 05:02:19] 2025-10-12 09:01:25,408 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839588765/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,409 | INFO     | extracted standard info from prmon json
[2025-10-12 05:02:19] 2025-10-12 09:01:25,409 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:02:19] 2025-10-12 09:01:25,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:02:19] 2025-10-12 09:01:25,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:02:19] 2025-10-12 09:01:25,409 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:02:19] 2025-10-12 09:01:25,411 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:02:19] 2025-10-12 09:01:25,411 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,411 | INFO     | sum of deviations: -7657290350.0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,411 | INFO     | mean x: 1760257601.5
[2025-10-12 05:02:19] 2025-10-12 09:01:25,412 | INFO     | mean y: 2785676.9375
[2025-10-12 05:02:19] 2025-10-12 09:01:25,412 | INFO     | -- intersect: 165861784467.58636
[2025-10-12 05:02:19] 2025-10-12 09:01:25,412 | INFO     | intersect: 165861784467.58636
[2025-10-12 05:02:19] 2025-10-12 09:01:25,412 | INFO     | chi2: 0.05462163558107469
[2025-10-12 05:02:19] 2025-10-12 09:01:25,412 | INFO     | -- intersect: 165861784467.58636
[2025-10-12 05:02:19] 2025-10-12 09:01:25,412 | INFO     | current memory leak: -94.22 B/s (using 64 data points, chi2=0.05)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | could have reported an average CPU frequency of 2071 MHz (6 samples)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | ..............................
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . Timing measurements:
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . get job = 0 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . initial setup = 2 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . payload setup = 7 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . stage-in = 0 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . payload execution = 4301 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,413 | INFO     | . stage-out = 0 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,414 | INFO     | . log creation = 0 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,414 | INFO     | ..............................
[2025-10-12 05:02:19] 2025-10-12 09:01:25,819 | INFO     | 
[2025-10-12 05:02:19] 2025-10-12 09:01:25,819 | INFO     | job summary report
[2025-10-12 05:02:19] 2025-10-12 09:01:25,820 | INFO     | --------------------------------------------------
[2025-10-12 05:02:19] 2025-10-12 09:01:25,820 | INFO     | PanDA job id: 6839588765
[2025-10-12 05:02:19] 2025-10-12 09:01:25,820 | INFO     | task id: 46676269
[2025-10-12 05:02:19] 2025-10-12 09:01:25,820 | INFO     | errors: (none)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:02:19] 2025-10-12 09:01:25,820 | INFO     | pilot state: finished 
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | transexitcode: 0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | exeerrorcode: 0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | exeerrordiag: 
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | exitcode: 0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | exitmsg: OK
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | cpuconsumptiontime: 47408 s
[2025-10-12 05:02:19] 2025-10-12 09:01:25,821 | INFO     | nevents: 400
[2025-10-12 05:02:19] 2025-10-12 09:01:25,822 | INFO     | neventsw: 0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,822 | INFO     | pid: 18778
[2025-10-12 05:02:19] 2025-10-12 09:01:25,822 | INFO     | pgrp: 18778
[2025-10-12 05:02:19] 2025-10-12 09:01:25,822 | INFO     | corecount: 12
[2025-10-12 05:02:19] 2025-10-12 09:01:25,822 | INFO     | event service: False
[2025-10-12 05:02:19] 2025-10-12 09:01:25,822 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4312: 2375224, 4313: 2375223, 4315: 2384461, 4323: 2384599}
[2025-10-12 05:02:19] 2025-10-12 09:01:25,823 | INFO     | --------------------------------------------------
[2025-10-12 05:02:19] 2025-10-12 09:01:25,823 | INFO     | 
[2025-10-12 05:02:19] 2025-10-12 09:01:25,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:02:19] 2025-10-12 09:01:25,957 | INFO     | time since job start (4339s) is within the limit (172800.0s)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | job 6839588765 has completed (purged errors)
[2025-10-12 05:02:19] 2025-10-12 09:01:25,961 | INFO     | overall cleanup function is called
[2025-10-12 05:02:19] 2025-10-12 09:01:26,969 | INFO     | --- collectZombieJob: --- 10, [18778]
[2025-10-12 05:02:19] 2025-10-12 09:01:26,969 | INFO     | zombie collector waiting for pid 18778
[2025-10-12 05:02:19] 2025-10-12 09:01:26,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:02:19] 2025-10-12 09:01:26,970 | INFO     | collected zombie processes
[2025-10-12 05:02:19] 2025-10-12 09:01:26,970 | INFO     | will attempt to kill all subprocesses of pid=18778
[2025-10-12 05:02:19] 2025-10-12 09:01:27,063 | INFO     | process IDs to be killed: [18778] (in reverse order)
[2025-10-12 05:02:19] 2025-10-12 09:01:27,115 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:02:19] 2025-10-12 09:01:27,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:02:19] 2025-10-12 09:01:27,118 | INFO     | did not find any defunct processes belonging to 18778
[2025-10-12 05:02:19] 2025-10-12 09:01:27,120 | INFO     | did not find any defunct processes belonging to 18778
[2025-10-12 05:02:19] 2025-10-12 09:01:27,121 | INFO     | ready for new job
[2025-10-12 05:02:19] 2025-10-12 09:01:27,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:02:19] 2025-10-12 09:01:27,122 | INFO     | ***************************************
[2025-10-12 05:02:19] 2025-10-12 09:01:27,122 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 05:02:19] 2025-10-12 09:01:27,122 | INFO     | ***************************************
[2025-10-12 05:02:19] 2025-10-12 09:01:27,122 | INFO     | 
[2025-10-12 05:02:19] 2025-10-12 09:01:27,123 | INFO     | architecture information:
[2025-10-12 05:02:19] 2025-10-12 09:01:27,123 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:02:19] 2025-10-12 09:01:27,138 | INFO     | cat /etc/os-release:
[2025-10-12 05:02:19] NAME="CentOS Linux"
[2025-10-12 05:02:19] VERSION="7 (Core)"
[2025-10-12 05:02:19] ID="centos"
[2025-10-12 05:02:19] ID_LIKE="rhel fedora"
[2025-10-12 05:02:19] VERSION_ID="7"
[2025-10-12 05:02:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:02:19] ANSI_COLOR="0;31"
[2025-10-12 05:02:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:02:19] HOME_URL="https://www.centos.org/"
[2025-10-12 05:02:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:02:19] 
[2025-10-12 05:02:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:02:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:02:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:02:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:02:19] 
[2025-10-12 05:02:19] 2025-10-12 09:01:27,138 | INFO     | ***************************************
[2025-10-12 05:02:19] 2025-10-12 09:01:27,641 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:02:19] 2025-10-12 09:01:27,657 | INFO     | sufficient remaining disk space (29481762816 B)
[2025-10-12 05:02:19] 2025-10-12 09:01:27,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:02:19] 2025-10-12 09:01:27,658 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:02:19] 2025-10-12 09:01:27,658 | INFO     | update_server=False
[2025-10-12 05:02:19] 2025-10-12 09:01:27,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:02:19] 2025-10-12 09:01:27,658 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 05:02:19] 2025-10-12 09:01:27,659 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:02:19] 2025-10-12 09:01:27,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:02:19] 2025-10-12 09:01:27,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:02:19] 2025-10-12 09:01:28,186 | INFO     | all job control threads have been joined
[2025-10-12 05:02:19] 2025-10-12 09:01:28,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:02:19] 2025-10-12 09:01:28,358 | INFO     | all data control threads have been joined
[2025-10-12 05:02:19] 2025-10-12 09:01:28,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:02:19] 2025-10-12 09:01:28,630 | INFO     | aborting loop
[2025-10-12 05:02:19] 2025-10-12 09:01:28,643 | INFO     | all payload control threads have been joined
[2025-10-12 05:02:19] 2025-10-12 09:01:28,664 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:28,753 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:28,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:02:19] 2025-10-12 09:01:29,192 | INFO     | [job] control thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,214 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,217 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,290 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,345 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,364 | INFO     | [data] control thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,529 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,634 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:29,648 | INFO     | [payload] control thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:30,080 | INFO     | [job] validate thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:30,284 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:30,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:02:19] 2025-10-12 09:01:31,509 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:32,911 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:01:38,168 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:02:19] 2025-10-12 09:01:39,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:02:19] 2025-10-12 09:02:12,890 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:02:19] 2025-10-12 09:02:14,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680702289728)>', '<ExcThread(monitor, started 139679869409024)>']
[2025-10-12 05:02:19] 2025-10-12 09:02:14,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:02:19] 2025-10-12 09:02:14,881 | INFO     | [monitor] control thread has ended
[2025-10-12 05:02:19] 2025-10-12 09:02:19,445 | INFO     | all workflow threads have been joined
[2025-10-12 05:02:19] 2025-10-12 09:02:19,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:02:19] 2025-10-12 09:02:19,445 | INFO     | traces error code: 0
[2025-10-12 05:02:19] 2025-10-12 09:02:19,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:02:19] 2025-10-12 09:02:19,535 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:02:19] 2025-10-12 09:02:19,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:02:19] 2025-10-12 09:02:19,543 [wrapper] pilotpid: 12425
[2025-10-12 05:02:19] 2025-10-12 09:02:19,547 [wrapper] Pilot exit status: 0
[2025-10-12 05:02:19] 2025-10-12 09:02:19,563 [wrapper] pandaids: 6839588765
[2025-10-12 05:02:19] 2025-10-12 09:02:19,609 [wrapper] cleanup supervisor_pilot  6382 12426
[2025-10-12 05:02:19] 2025-10-12 09:02:19,613 [wrapper] Test setup, not cleaning
[2025-10-12 05:02:19] 2025-10-12 09:02:19,617 [wrapper] apfmon messages muted
[2025-10-12 05:02:19] 2025-10-12 09:02:19,621 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:02:19] 2025-10-12 09:02:19,625 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:02:19]  *** Error codes and diagnostics ***
[2025-10-12 05:02:19]     "exeErrorCode": 0,
[2025-10-12 05:02:19]     "exeErrorDiag": "",
[2025-10-12 05:02:19]     "pilotErrorCode": 0,
[2025-10-12 05:02:19]     "pilotErrorDiag": "",
[2025-10-12 05:02:19]  *** Listing of results directory ***
[2025-10-12 05:02:19] total 416000
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 01:31 queuedata.json
[2025-10-12 05:02:19] -rwx------ 1 boincer umatlas     36292 Oct 12 01:31 runpilot2-wrapper.sh
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:02:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:48 run_atlas
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:48 job.xml
[2025-10-12 05:02:19] -rw-r--r-- 2 boincer umatlas 220517988 Oct 12 03:48 EVNT.46676267._004321.pool.root.1
[2025-10-12 05:02:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:48 start_atlas.sh
[2025-10-12 05:02:19] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:48 shared
[2025-10-12 05:02:19] -rw-r--r-- 2 boincer umatlas    576708 Oct 12 03:48 input.tar.gz
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:48 boinc_lockfile
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 03:48 pandaJob.out
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas    975520 Oct 12 03:49 agis_schedconf.cvmfs.json
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas   1560580 Oct 12 03:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:02:19] drwx------ 4 boincer umatlas      4096 Oct 12 03:49 pilot3
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 04:57 init_data.xml
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas 199526404 Oct 12 05:00 HITS.46676269._071957.pool.root.1
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas       530 Oct 12 05:00 boinc_task_state.xml
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas        95 Oct 12 05:01 pilot_heartbeat.json
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas      1049 Oct 12 05:01 memory_monitor_summary.json
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas    384996 Oct 12 05:01 log.46676269._071957.job.log.tgz.1
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas      7858 Oct 12 05:01 heartbeat.json
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:02 wrapper_checkpoint.txt
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:02 boinc_mmap_file
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas      4624 Oct 12 05:02 pilotlog.txt
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas    628417 Oct 12 05:02 log.46676269._071957.job.log.1
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas       357 Oct 12 05:02 output.list
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:02 runtime_log
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas   1034240 Oct 12 05:02 result.tar.gz
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas       658 Oct 12 05:02 uieLDmuq3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmokiNDmuGgz7n.diag
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 05:02 runtime_log.err
[2025-10-12 05:02:19] -rw-r--r-- 1 boincer umatlas     21809 Oct 12 05:02 stderr.txt
[2025-10-12 05:02:19] HITS file was successfully produced:
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas 199526404 Oct 12 05:00 shared/HITS.pool.root.1
[2025-10-12 05:02:19]  *** Contents of shared directory: ***
[2025-10-12 05:02:19] total 411800
[2025-10-12 05:02:19] -rw-r--r-- 2 boincer umatlas 220517988 Oct 12 03:48 ATLAS.root_0
[2025-10-12 05:02:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:48 start_atlas.sh
[2025-10-12 05:02:19] -rw-r--r-- 2 boincer umatlas    576708 Oct 12 03:48 input.tar.gz
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas 199526404 Oct 12 05:00 HITS.pool.root.1
[2025-10-12 05:02:19] -rw------- 1 boincer umatlas   1034240 Oct 12 05:02 result.tar.gz
05:02:21 (8696): run_atlas exited; CPU time 47378.595712
05:02:21 (8696): called boinc_finish(0)

</stderr_txt>
]]>

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