Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:52:42 (2862527): wrapper (7.7.26015): starting
19:52:42 (2862527): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 19:52:42] Arguments: --nthreads 3
[2025-10-12 19:52:42] Threads: 3
[2025-10-12 19:52:42] Checking for CVMFS
[2025-10-12 19:52:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:52:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:52:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:52:42] 2.9.2.0 1520902 4525 86764 151630 2 56 23184398 36864000 0 130560 0 3546073 99.991 157349 1008 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:52:42] CVMFS is ok
[2025-10-12 19:52:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:52:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:52:42] Further information can be found at the LHC@home message board.
[2025-10-12 19:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:52:42] Checking for apptainer binary...
[2025-10-12 19:52:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:52:42] Running /usr/bin/apptainer --version
[2025-10-12 19:52:42] apptainer version 1.4.1-1.1
[2025-10-12 19:52:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:52:42] magicA250a
[2025-10-12 19:52:42] apptainer works
[2025-10-12 19:52:42] Set ATHENA_PROC_NUMBER=3
[2025-10-12 19:52:42] Set ATHENA_CORE_NUMBER=3
[2025-10-12 19:52:42] Starting ATLAS job with PandaID=6839588767
[2025-10-12 19:52:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:19:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:19:59] 2025-10-12 19:19:08,804 | INFO     | all payload control threads have been joined
[2025-10-12 21:19:59] 2025-10-12 19:19:09,067 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,067 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,147 | INFO     | [job] control thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,187 | INFO     | [job] validate thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,194 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,259 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:19:59] 2025-10-12 19:19:09,552 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,747 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,772 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,782 | INFO     | [data] control thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:09,806 | INFO     | [payload] control thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:10,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:19:59] 2025-10-12 19:19:10,419 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:10,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:10,536 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:11,312 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:14,337 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:19:59] 2025-10-12 19:19:38,291 | INFO     | PID=2866242 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:19:59] 2025-10-12 19:19:38,291 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:19:59] 2025-10-12 19:19:38,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:19:59] 2025-10-12 19:19:38,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:19:59] 2025-10-12 19:19:54,311 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:19:59] 2025-10-12 19:19:54,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718814857024)>', '<ExcThread(monitor, started 139718457005824)>']
[2025-10-12 21:19:59] 2025-10-12 19:19:55,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:19:59] 2025-10-12 19:19:55,378 | INFO     | [monitor] control thread has ended
[2025-10-12 21:19:59] 2025-10-12 19:19:59,800 | INFO     | all workflow threads have been joined
[2025-10-12 21:19:59] 2025-10-12 19:19:59,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:19:59] 2025-10-12 19:19:59,800 | INFO     | traces error code: 0
[2025-10-12 21:19:59] 2025-10-12 19:19:59,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:19:59] 2025-10-12 19:19:59,849 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:19:59] 2025-10-12 19:19:59,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:19:59] 2025-10-12 19:19:59,853 [wrapper] pilotpid: 2866242
[2025-10-12 21:19:59] 2025-10-12 19:19:59,856 [wrapper] Pilot exit status: 0
[2025-10-12 21:19:59] 2025-10-12 19:19:59,862 [wrapper] pandaids: 6839588767
[2025-10-12 21:19:59] 2025-10-12 19:19:59,879 [wrapper] cleanup supervisor_pilot 2884606 2866243
[2025-10-12 21:19:59] 2025-10-12 19:19:59,881 [wrapper] Test setup, not cleaning
[2025-10-12 21:19:59] 2025-10-12 19:19:59,883 [wrapper] apfmon messages muted
[2025-10-12 21:19:59] 2025-10-12 19:19:59,886 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:19:59] 2025-10-12 19:19:59,888 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:19:59]  *** Error codes and diagnostics ***
[2025-10-12 21:19:59]     "exeErrorCode": 0,
[2025-10-12 21:19:59]     "exeErrorDiag": "",
[2025-10-12 21:19:59]     "pilotErrorCode": 0,
[2025-10-12 21:19:59]     "pilotErrorDiag": "",
[2025-10-12 21:19:59]  *** Listing of results directory ***
[2025-10-12 21:19:59] total 417228
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-12 21:19:59] -rwx------ 1 boinc boinc     36292 Oct 12 07:28 runpilot2-wrapper.sh
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:28 queuedata.json
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:19:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:52 run_atlas
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:52 job.xml
[2025-10-12 21:19:59] -rw-r--r-- 2 boinc boinc 220517988 Oct 12 19:52 EVNT.46676267._004321.pool.root.1
[2025-10-12 21:19:59] -rw-r--r-- 2 boinc boinc    569677 Oct 12 19:52 input.tar.gz
[2025-10-12 21:19:59] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:52 shared
[2025-10-12 21:19:59] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:52 start_atlas.sh
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:52 boinc_setup_complete
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc      6442 Oct 12 19:52 init_data.xml
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:52 boinc_lockfile
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc      2549 Oct 12 19:52 pandaJob.out
[2025-10-12 21:19:59] -rw------- 1 boinc boinc    975528 Oct 12 19:52 agis_schedconf.cvmfs.json
[2025-10-12 21:19:59] -rw------- 1 boinc boinc   1560580 Oct 12 19:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:19:59] drwx------ 5 boinc boinc      4096 Oct 12 19:52 pilot3
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:18 boinc_task_state.xml
[2025-10-12 21:19:59] -rw------- 1 boinc boinc 200802222 Oct 12 21:18 HITS.46676269._071959.pool.root.1
[2025-10-12 21:19:59] -rw------- 1 boinc boinc      1023 Oct 12 21:18 memory_monitor_summary.json
[2025-10-12 21:19:59] -rw------- 1 boinc boinc    261698 Oct 12 21:18 log.46676269._071959.job.log.tgz.1
[2025-10-12 21:19:59] -rw------- 1 boinc boinc      7771 Oct 12 21:19 heartbeat.json
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:19 wrapper_checkpoint.txt
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:19 boinc_mmap_file
[2025-10-12 21:19:59] -rw------- 1 boinc boinc        95 Oct 12 21:19 pilot_heartbeat.json
[2025-10-12 21:19:59] -rw------- 1 boinc boinc      4938 Oct 12 21:19 pilotlog.txt
[2025-10-12 21:19:59] -rw------- 1 boinc boinc    757683 Oct 12 21:19 log.46676269._071959.job.log.1
[2025-10-12 21:19:59] -rw------- 1 boinc boinc       357 Oct 12 21:19 output.list
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:19 runtime_log
[2025-10-12 21:19:59] -rw------- 1 boinc boinc   1034240 Oct 12 21:19 result.tar.gz
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc      8797 Oct 12 21:19 runtime_log.err
[2025-10-12 21:19:59] -rw------- 1 boinc boinc       662 Oct 12 21:19 HlANDmyn3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOkiNDmXiHTan.diag
[2025-10-12 21:19:59] -rw-r--r-- 1 boinc boinc      6669 Oct 12 21:19 stderr.txt
[2025-10-12 21:19:59] HITS file was successfully produced:
[2025-10-12 21:19:59] -rw------- 1 boinc boinc 200802222 Oct 12 21:18 shared/HITS.pool.root.1
[2025-10-12 21:19:59]  *** Contents of shared directory: ***
[2025-10-12 21:19:59] total 413044
[2025-10-12 21:19:59] -rw-r--r-- 2 boinc boinc 220517988 Oct 12 19:52 ATLAS.root_0
[2025-10-12 21:19:59] -rw-r--r-- 2 boinc boinc    569677 Oct 12 19:52 input.tar.gz
[2025-10-12 21:19:59] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:52 start_atlas.sh
[2025-10-12 21:19:59] -rw------- 1 boinc boinc 200802222 Oct 12 21:18 HITS.pool.root.1
[2025-10-12 21:19:59] -rw------- 1 boinc boinc   1034240 Oct 12 21:19 result.tar.gz
21:20:01 (2862527): run_atlas exited; CPU time 14892.675252
21:20:01 (2862527): called boinc_finish(0)

</stderr_txt>
]]>

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