Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:13:15 (2999692): wrapper (7.7.26015): starting
18:13:15 (2999692): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:13:15] Arguments: --nthreads 3
[2025-10-12 18:13:15] Threads: 3
[2025-10-12 18:13:15] Checking for CVMFS
[2025-10-12 18:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:13:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:13:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:13:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:13:16] 2.9.2.0 1670520 4361 81652 151625 3 57 30113252 36864000 0 130560 0 3479537 99.991 156156 863 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:13:16] CVMFS is ok
[2025-10-12 18:13:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:13:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:13:16] Further information can be found at the LHC@home message board.
[2025-10-12 18:13:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:13:16] Checking for apptainer binary...
[2025-10-12 18:13:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:13:16] Running /usr/bin/apptainer --version
[2025-10-12 18:13:16] apptainer version 1.4.1-1.1
[2025-10-12 18:13:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:13:16] magicA246
[2025-10-12 18:13:16] apptainer works
[2025-10-12 18:13:16] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:13:16] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:13:16] Starting ATLAS job with PandaID=6839316751
[2025-10-12 18:13:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:32:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:32:52] 2025-10-12 17:32:22,023 | INFO     | sufficient remaining disk space (374785179648 B)
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | INFO     | update_server=False
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | INFO     | aborting loop
[2025-10-12 19:32:52] 2025-10-12 17:32:22,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:32:52] 2025-10-12 17:32:22,316 | INFO     | all job control threads have been joined
[2025-10-12 19:32:52] 2025-10-12 17:32:22,513 | INFO     | all data control threads have been joined
[2025-10-12 19:32:52] 2025-10-12 17:32:22,556 | INFO     | all payload control threads have been joined
[2025-10-12 19:32:52] 2025-10-12 17:32:23,030 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,030 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,030 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,072 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:32:52] 2025-10-12 17:32:23,322 | INFO     | [job] control thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,519 | INFO     | [data] control thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,544 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,562 | INFO     | [payload] control thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:23,843 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:24,030 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:24,166 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:24,391 | INFO     | [job] validate thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:24,456 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:24,481 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:27,173 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:27,627 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:32:52] 2025-10-12 17:32:32,809 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:32:52] 2025-10-12 17:32:33,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:32:52] 2025-10-12 17:32:34,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444962854720)>', '<ExcThread(monitor, started 140444474267392)>']
[2025-10-12 19:32:52] 2025-10-12 17:32:39,068 | INFO     | all workflow threads have been joined
[2025-10-12 19:32:52] 2025-10-12 17:32:39,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:32:52] 2025-10-12 17:32:39,069 | INFO     | traces error code: 0
[2025-10-12 19:32:52] 2025-10-12 17:32:39,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:32:52] 2025-10-12 17:32:52,048 | INFO     | PID=3003426 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:32:52] 2025-10-12 17:32:52,048 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:32:52] 2025-10-12 17:32:52,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:32:52] 2025-10-12 17:32:52,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:32:52] 2025-10-12 17:32:52,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:32:52] 2025-10-12 17:32:52,048 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 19:32:52] 2025-10-12 17:32:52,049 | INFO     | [monitor] control thread has ended
[2025-10-12 19:32:52] 2025-10-12 17:32:52,099 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:32:52] 2025-10-12 17:32:52,101 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:32:52] 2025-10-12 17:32:52,103 [wrapper] pilotpid: 3003426
[2025-10-12 19:32:52] 2025-10-12 17:32:52,106 [wrapper] Pilot exit status: 0
[2025-10-12 19:32:52] 2025-10-12 17:32:52,114 [wrapper] pandaids: 6839316751
[2025-10-12 19:32:52] 2025-10-12 17:32:52,131 [wrapper] cleanup supervisor_pilot 3021845 3003427
[2025-10-12 19:32:52] 2025-10-12 17:32:52,134 [wrapper] Test setup, not cleaning
[2025-10-12 19:32:52] 2025-10-12 17:32:52,136 [wrapper] apfmon messages muted
[2025-10-12 19:32:52] 2025-10-12 17:32:52,139 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:32:52] 2025-10-12 17:32:52,141 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:32:52]  *** Error codes and diagnostics ***
[2025-10-12 19:32:52]     "exeErrorCode": 0,
[2025-10-12 19:32:52]     "exeErrorDiag": "",
[2025-10-12 19:32:52]     "pilotErrorCode": 0,
[2025-10-12 19:32:52]     "pilotErrorDiag": "",
[2025-10-12 19:32:52]  *** Listing of results directory ***
[2025-10-12 19:32:52] total 403752
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:53 pilot3.tar.gz
[2025-10-12 19:32:52] -rwx------ 1 boinc boinc     36292 Oct 12 04:40 runpilot2-wrapper.sh
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc      5112 Oct 12 04:40 queuedata.json
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:32:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:13 run_atlas
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:13 job.xml
[2025-10-12 19:32:52] -rw-r--r-- 2 boinc boinc 219486583 Oct 12 18:13 EVNT.46676267._003185.pool.root.1
[2025-10-12 19:32:52] -rw-r--r-- 2 boinc boinc    569679 Oct 12 18:13 input.tar.gz
[2025-10-12 19:32:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:13 start_atlas.sh
[2025-10-12 19:32:52] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:13 shared
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:13 boinc_setup_complete
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc      6448 Oct 12 18:13 init_data.xml
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:13 boinc_lockfile
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:13 pandaJob.out
[2025-10-12 19:32:52] -rw------- 1 boinc boinc    975528 Oct 12 18:13 agis_schedconf.cvmfs.json
[2025-10-12 19:32:52] -rw------- 1 boinc boinc   1560580 Oct 12 18:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:32:52] drwx------ 5 boinc boinc      4096 Oct 12 18:13 pilot3
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:31 boinc_task_state.xml
[2025-10-12 19:32:52] -rw------- 1 boinc boinc 188163656 Oct 12 19:31 HITS.46676269._069421.pool.root.1
[2025-10-12 19:32:52] -rw------- 1 boinc boinc      1014 Oct 12 19:32 memory_monitor_summary.json
[2025-10-12 19:32:52] -rw------- 1 boinc boinc    253231 Oct 12 19:32 log.46676269._069421.job.log.tgz.1
[2025-10-12 19:32:52] -rw------- 1 boinc boinc      7757 Oct 12 19:32 heartbeat.json
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:32 wrapper_checkpoint.txt
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:32 boinc_mmap_file
[2025-10-12 19:32:52] -rw------- 1 boinc boinc       817 Oct 12 19:32 pilotlog.txt
[2025-10-12 19:32:52] -rw------- 1 boinc boinc        95 Oct 12 19:32 pilot_heartbeat.json
[2025-10-12 19:32:52] -rw------- 1 boinc boinc    699269 Oct 12 19:32 log.46676269._069421.job.log.1
[2025-10-12 19:32:52] -rw------- 1 boinc boinc       357 Oct 12 19:32 output.list
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:32 runtime_log
[2025-10-12 19:32:52] -rw------- 1 boinc boinc    972800 Oct 12 19:32 result.tar.gz
[2025-10-12 19:32:52] -rw------- 1 boinc boinc       661 Oct 12 19:32 4tyKDm1B1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9MiNDm9RFWjm.diag
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc      8792 Oct 12 19:32 runtime_log.err
[2025-10-12 19:32:52] -rw-r--r-- 1 boinc boinc      7940 Oct 12 19:32 stderr.txt
[2025-10-12 19:32:52] HITS file was successfully produced:
[2025-10-12 19:32:52] -rw------- 1 boinc boinc 188163656 Oct 12 19:31 shared/HITS.pool.root.1
[2025-10-12 19:32:52]  *** Contents of shared directory: ***
[2025-10-12 19:32:52] total 399636
[2025-10-12 19:32:52] -rw-r--r-- 2 boinc boinc 219486583 Oct 12 18:13 ATLAS.root_0
[2025-10-12 19:32:52] -rw-r--r-- 2 boinc boinc    569679 Oct 12 18:13 input.tar.gz
[2025-10-12 19:32:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:13 start_atlas.sh
[2025-10-12 19:32:52] -rw------- 1 boinc boinc 188163656 Oct 12 19:31 HITS.pool.root.1
[2025-10-12 19:32:52] -rw------- 1 boinc boinc    972800 Oct 12 19:32 result.tar.gz
19:32:53 (2999692): run_atlas exited; CPU time 13511.897046
19:32:53 (2999692): called boinc_finish(0)

</stderr_txt>
]]>

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