Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:20:45 (27271): wrapper (7.7.26015): starting
05:20:45 (27271): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:20:45] Arguments: --nthreads 4
[2025-10-13 05:20:45] Threads: 4
[2025-10-13 05:20:45] Checking for CVMFS
[2025-10-13 05:20:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:20:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:20:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:20:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:20:45] 2.12.7.0 3347374 6970 70124 151647 2 188 3580286 6144000 1834 130560 3 14440707 99.996 243666 346 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-10-13 05:20:45] CVMFS is ok
[2025-10-13 05:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:20:45] Checking for apptainer binary...
[2025-10-13 05:20:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:20:45] Running /usr/bin/apptainer --version
[2025-10-13 05:20:45] apptainer version 1.4.2
[2025-10-13 05:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:20:45] Ryzen8
[2025-10-13 05:20:45] apptainer works
[2025-10-13 05:20:45] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:20:45] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:20:45] Starting ATLAS job with PandaID=6839316745
[2025-10-13 05:20:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:42:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:42:03] 2025-10-13 04:40:36,185 | INFO     | monitor loop #372: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:36,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:36,211 | INFO     | time since job start (4786s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:38,215 | INFO     | time since job start (4788s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:38,688 | INFO     | monitor loop #373: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:38,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:40,218 | INFO     | time since job start (4790s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:41,191 | INFO     | monitor loop #374: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:41,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:42,223 | INFO     | time since job start (4792s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:43,693 | INFO     | monitor loop #375: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:43,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:44,227 | INFO     | time since job start (4794s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:46,197 | INFO     | monitor loop #376: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:46,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:46,231 | INFO     | time since job start (4796s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:48,237 | INFO     | time since job start (4798s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:48,698 | INFO     | monitor loop #377: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:48,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:50,242 | INFO     | time since job start (4800s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:51,201 | INFO     | monitor loop #378: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:51,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:51,312 | INFO     | PID=30983 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:42:03] 2025-10-13 04:40:51,312 | INFO     | .. there are 3 such processes running
[2025-10-13 06:42:03] 2025-10-13 04:40:52,313 | INFO     | time since job start (4802s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:53,704 | INFO     | monitor loop #379: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:53,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:54,318 | INFO     | time since job start (4804s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:56,207 | INFO     | monitor loop #380: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:56,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:40:56,321 | INFO     | time since job start (4806s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:58,324 | INFO     | time since job start (4808s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:40:58,710 | INFO     | monitor loop #381: job 0:6839316745 is in state 'finished'
[2025-10-13 06:42:03] 2025-10-13 04:40:58,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,330 | INFO     | time since job start (4810s) is within the limit (172800.0s)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,577 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:42:03] 2025-10-13 04:41:00,579 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4339.8147500000005
[2025-10-13 06:42:03] 2025-10-13 04:41:00,580 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839316745/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,580 | INFO     | extracted standard info from prmon json
[2025-10-13 06:42:03] 2025-10-13 04:41:00,580 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:42:03] 2025-10-13 04:41:00,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:42:03] 2025-10-13 04:41:00,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:42:03] 2025-10-13 04:41:00,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:42:03] 2025-10-13 04:41:00,581 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:42:03] 2025-10-13 04:41:00,581 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | sum of deviations: -9296956564.0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | mean x: 1760328109.0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | mean y: 2558785.3661971833
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | -- intersect: 147494100959.3206
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | intersect: 147494100959.3206
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | chi2: 0.0830032042807106
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | -- intersect: 147494100959.3206
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | current memory leak: -83.79 B/s (using 71 data points, chi2=0.08)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | could have reported an average CPU frequency of 4334 MHz (6 samples)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | ..............................
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . Timing measurements:
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . get job = 0 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . initial setup = 0 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . payload setup = 2 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . stage-in = 0 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . payload execution = 4741 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . stage-out = 0 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | . log creation = 0 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,582 | INFO     | ..............................
[2025-10-13 06:42:03] 2025-10-13 04:41:00,874 | INFO     | 
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | job summary report
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | --------------------------------------------------
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | PanDA job id: 6839316745
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | task id: 46676269
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | errors: (none)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | pilot state: finished 
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | transexitcode: 0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | exeerrorcode: 0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | exeerrordiag: 
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | exitcode: 0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | exitmsg: OK
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | cpuconsumptiontime: 18348 s
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | nevents: 400
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | neventsw: 0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | pid: 37410
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | pgrp: 37410
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | corecount: 4
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | event service: False
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | sizes: {0: 2348857, 2: 2349119, 10: 2349147, 4748: 2384496, 4749: 2384496, 4798: 2384690}
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | --------------------------------------------------
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | 
[2025-10-13 06:42:03] 2025-10-13 04:41:00,875 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:42:03] 2025-10-13 04:41:00,888 | INFO     | job 6839316745 has completed (purged errors)
[2025-10-13 06:42:03] 2025-10-13 04:41:00,889 | INFO     | overall cleanup function is called
[2025-10-13 06:42:03] 2025-10-13 04:41:01,895 | INFO     | --- collectZombieJob: --- 10, [37410]
[2025-10-13 06:42:03] 2025-10-13 04:41:01,895 | INFO     | zombie collector waiting for pid 37410
[2025-10-13 06:42:03] 2025-10-13 04:41:01,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:42:03] 2025-10-13 04:41:01,895 | INFO     | collected zombie processes
[2025-10-13 06:42:03] 2025-10-13 04:41:01,895 | INFO     | will attempt to kill all subprocesses of pid=37410
[2025-10-13 06:42:03] 2025-10-13 04:41:01,950 | INFO     | process IDs to be killed: [37410] (in reverse order)
[2025-10-13 06:42:03] 2025-10-13 04:41:01,977 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:42:03] 2025-10-13 04:41:01,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:42:03] 2025-10-13 04:41:01,980 | INFO     | did not find any defunct processes belonging to 37410
[2025-10-13 06:42:03] 2025-10-13 04:41:01,981 | INFO     | did not find any defunct processes belonging to 37410
[2025-10-13 06:42:03] 2025-10-13 04:41:01,981 | INFO     | ready for new job
[2025-10-13 06:42:03] 2025-10-13 04:41:01,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:42:03] 2025-10-13 04:41:01,982 | INFO     | ***************************************
[2025-10-13 06:42:03] 2025-10-13 04:41:01,983 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:42:03] 2025-10-13 04:41:01,983 | INFO     | ***************************************
[2025-10-13 06:42:03] 2025-10-13 04:41:01,983 | INFO     | 
[2025-10-13 06:42:03] 2025-10-13 04:41:01,983 | INFO     | architecture information:
[2025-10-13 06:42:03] 2025-10-13 04:41:01,983 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:42:03] 2025-10-13 04:41:01,991 | INFO     | cat /etc/os-release:
[2025-10-13 06:42:03] NAME="CentOS Linux"
[2025-10-13 06:42:03] VERSION="7 (Core)"
[2025-10-13 06:42:03] ID="centos"
[2025-10-13 06:42:03] ID_LIKE="rhel fedora"
[2025-10-13 06:42:03] VERSION_ID="7"
[2025-10-13 06:42:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:42:03] ANSI_COLOR="0;31"
[2025-10-13 06:42:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:42:03] HOME_URL="https://www.centos.org/"
[2025-10-13 06:42:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:42:03] 
[2025-10-13 06:42:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:42:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:42:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:42:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:42:03] 
[2025-10-13 06:42:03] 2025-10-13 04:41:01,991 | INFO     | ***************************************
[2025-10-13 06:42:03] 2025-10-13 04:41:02,494 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 06:42:03] 2025-10-13 04:41:02,503 | INFO     | sufficient remaining disk space (99106160640 B)
[2025-10-13 06:42:03] 2025-10-13 04:41:02,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:42:03] 2025-10-13 04:41:02,503 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:42:03] 2025-10-13 04:41:02,503 | INFO     | update_server=False
[2025-10-13 06:42:03] 2025-10-13 04:41:02,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:42:03] 2025-10-13 04:41:02,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:42:03] 2025-10-13 04:41:02,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:42:03] 2025-10-13 04:41:02,504 | INFO     | aborting loop
[2025-10-13 06:42:03] 2025-10-13 04:41:02,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:42:03] 2025-10-13 04:41:02,581 | INFO     | all job control threads have been joined
[2025-10-13 06:42:03] 2025-10-13 04:41:02,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:42:03] 2025-10-13 04:41:03,475 | INFO     | all data control threads have been joined
[2025-10-13 06:42:03] 2025-10-13 04:41:03,508 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:03,509 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:03,510 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:03,518 | INFO     | all payload control threads have been joined
[2025-10-13 06:42:03] 2025-10-13 04:41:03,550 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:03,586 | INFO     | [job] control thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,113 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,121 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,462 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,478 | INFO     | [data] control thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,508 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,521 | INFO     | [payload] control thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,739 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,891 | INFO     | [job] validate thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:04,988 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:06,605 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:12,601 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:42:03] 2025-10-13 04:41:13,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:42:03] 2025-10-13 04:41:33,472 | INFO     | PID=30983 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:42:03] 2025-10-13 04:41:33,472 | INFO     | .. there are 3 such processes running
[2025-10-13 06:42:03] 2025-10-13 04:41:33,473 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:42:03] 2025-10-13 04:41:33,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:42:03] 2025-10-13 04:41:33,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:42:03] 2025-10-13 04:41:58,094 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:42:03] 2025-10-13 04:41:58,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270753486656)>', '<ExcThread(monitor, started 140270259656448)>']
[2025-10-13 06:42:03] 2025-10-13 04:41:58,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:42:03] 2025-10-13 04:41:58,571 | INFO     | [monitor] control thread has ended
[2025-10-13 06:42:03] 2025-10-13 04:42:03,321 | INFO     | all workflow threads have been joined
[2025-10-13 06:42:03] 2025-10-13 04:42:03,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:42:03] 2025-10-13 04:42:03,321 | INFO     | traces error code: 0
[2025-10-13 06:42:03] 2025-10-13 04:42:03,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:42:03] 2025-10-13 04:42:03,378 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:42:03] 2025-10-13 04:42:03,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:42:03] 2025-10-13 04:42:03,382 [wrapper] pilotpid: 30983
[2025-10-13 06:42:03] 2025-10-13 04:42:03,383 [wrapper] Pilot exit status: 0
[2025-10-13 06:42:03] 2025-10-13 04:42:03,389 [wrapper] pandaids: 6839316745
[2025-10-13 06:42:03] 2025-10-13 04:42:03,405 [wrapper] cleanup supervisor_pilot   76288 30984
[2025-10-13 06:42:03] 2025-10-13 04:42:03,406 [wrapper] Test setup, not cleaning
[2025-10-13 06:42:03] 2025-10-13 04:42:03,407 [wrapper] apfmon messages muted
[2025-10-13 06:42:03] 2025-10-13 04:42:03,409 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:42:03] 2025-10-13 04:42:03,410 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:42:03]  *** Error codes and diagnostics ***
[2025-10-13 06:42:03]     "exeErrorCode": 0,
[2025-10-13 06:42:03]     "exeErrorDiag": "",
[2025-10-13 06:42:03]     "pilotErrorCode": 0,
[2025-10-13 06:42:03]     "pilotErrorDiag": "",
[2025-10-13 06:42:03]  *** Listing of results directory ***
[2025-10-13 06:42:03] insgesamt 405692
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc    557409 12. Okt 03:53 pilot3.tar.gz
[2025-10-13 06:42:03] -rwx------ 1 boinc boinc     36292 12. Okt 04:40 runpilot2-wrapper.sh
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc      5112 12. Okt 04:40 queuedata.json
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc       100 13. Okt 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:42:03] -rwxr-xr-x 1 boinc boinc      7986 13. Okt 05:20 run_atlas
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc       105 13. Okt 05:20 job.xml
[2025-10-13 06:42:03] -rw-r--r-- 2 boinc boinc     15120 13. Okt 05:20 start_atlas.sh
[2025-10-13 06:42:03] drwxrwx--x 2 boinc boinc      4096 13. Okt 05:20 shared
[2025-10-13 06:42:03] -rw-r--r-- 2 boinc boinc    569681 13. Okt 05:20 input.tar.gz
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc      9582 13. Okt 05:20 init_data.xml
[2025-10-13 06:42:03] -rw-r--r-- 2 boinc boinc 219486583 13. Okt 05:20 EVNT.46676267._003185.pool.root.1
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc         0 13. Okt 05:20 boinc_lockfile
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc      2550 13. Okt 05:20 pandaJob.out
[2025-10-13 06:42:03] -rw------- 1 boinc boinc    974373 13. Okt 05:20 agis_schedconf.cvmfs.json
[2025-10-13 06:42:03] -rw------- 1 boinc boinc   1560580 13. Okt 05:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:42:03] drwx------ 5 boinc boinc      4096 13. Okt 05:20 pilot3
[2025-10-13 06:42:03] -rw------- 1 boinc boinc 190072103 13. Okt 06:39 HITS.46676269._069415.pool.root.1
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc       529 13. Okt 06:40 boinc_task_state.xml
[2025-10-13 06:42:03] -rw------- 1 boinc boinc      1022 13. Okt 06:40 memory_monitor_summary.json
[2025-10-13 06:42:03] -rw------- 1 boinc boinc    262001 13. Okt 06:40 log.46676269._069415.job.log.tgz.1
[2025-10-13 06:42:03] -rw------- 1 boinc boinc      7767 13. Okt 06:41 heartbeat.json
[2025-10-13 06:42:03] -rw------- 1 boinc boinc        95 13. Okt 06:41 pilot_heartbeat.json
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc      8192 13. Okt 06:41 boinc_mmap_file
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc        27 13. Okt 06:41 wrapper_checkpoint.txt
[2025-10-13 06:42:03] -rw------- 1 boinc boinc      4893 13. Okt 06:42 pilotlog.txt
[2025-10-13 06:42:03] -rw------- 1 boinc boinc    723012 13. Okt 06:42 log.46676269._069415.job.log.1
[2025-10-13 06:42:03] -rw------- 1 boinc boinc       357 13. Okt 06:42 output.list
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc       620 13. Okt 06:42 runtime_log
[2025-10-13 06:42:03] -rw------- 1 boinc boinc   1003520 13. Okt 06:42 result.tar.gz
[2025-10-13 06:42:03] -rw------- 1 boinc boinc       640 13. Okt 06:42 YVqKDm1B1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3MiNDmtGyH2n.diag
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc      8663 13. Okt 06:42 runtime_log.err
[2025-10-13 06:42:03] -rw-r--r-- 1 boinc boinc     21887 13. Okt 06:42 stderr.txt
[2025-10-13 06:42:03] HITS file was successfully produced:
[2025-10-13 06:42:03] -rw------- 1 boinc boinc 190072103 13. Okt 06:39 shared/HITS.pool.root.1
[2025-10-13 06:42:03]  *** Contents of shared directory: ***
[2025-10-13 06:42:03] insgesamt 401524
[2025-10-13 06:42:03] -rw-r--r-- 2 boinc boinc     15120 13. Okt 05:20 start_atlas.sh
[2025-10-13 06:42:03] -rw-r--r-- 2 boinc boinc    569681 13. Okt 05:20 input.tar.gz
[2025-10-13 06:42:03] -rw-r--r-- 2 boinc boinc 219486583 13. Okt 05:20 ATLAS.root_0
[2025-10-13 06:42:03] -rw------- 1 boinc boinc 190072103 13. Okt 06:39 HITS.pool.root.1
[2025-10-13 06:42:03] -rw------- 1 boinc boinc   1003520 13. Okt 06:42 result.tar.gz
06:42:05 (27271): run_atlas exited; CPU time 18382.327359
06:42:05 (27271): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN