Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:58 (29224): wrapper (7.7.26015): starting
03:38:58 (29224): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 03:38:58] Arguments: --nthreads 8
[2025-10-12 03:38:58] Threads: 8
[2025-10-12 03:38:58] Checking for CVMFS
[2025-10-12 03:38:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:38:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:38:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:38:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:38:59] 2.11.2.0 2822 8210 73216 151612 3 56 14362801 20275200 1 130560 0 5025245 99.989 273539 36785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:38:59] CVMFS is ok
[2025-10-12 03:38:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:38:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:38:59] Further information can be found at the LHC@home message board.
[2025-10-12 03:38:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:38:59] Checking for apptainer binary...
[2025-10-12 03:38:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:38:59] Running /usr/bin/apptainer --version
[2025-10-12 03:38:59] apptainer version 1.3.2-1.el7
[2025-10-12 03:38:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:39:00] c-204-37.aglt2.org
[2025-10-12 03:39:00] apptainer works
[2025-10-12 03:39:00] Set ATHENA_PROC_NUMBER=8
[2025-10-12 03:39:00] Set ATHENA_CORE_NUMBER=8
[2025-10-12 03:39:00] Starting ATLAS job with PandaID=6839318386
[2025-10-12 03:39:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:44:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:44:37] 2025-10-12 09:43:30,842 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:44:37] 2025-10-12 09:43:30,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:44:37] 2025-10-12 09:43:30,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:44:37] 2025-10-12 09:43:30,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:44:37] 2025-10-12 09:43:30,846 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:44:37] 2025-10-12 09:43:30,846 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 05:44:37] 2025-10-12 09:43:30,847 | INFO     | sum of deviations: -11239355713.000008
[2025-10-12 05:44:37] 2025-10-12 09:43:30,847 | INFO     | mean x: 1760258479.5
[2025-10-12 05:44:37] 2025-10-12 09:43:30,847 | INFO     | mean y: 2566871.1147540985
[2025-10-12 05:44:37] 2025-10-12 09:43:30,847 | INFO     | -- intersect: 35141544784.98324
[2025-10-12 05:44:37] 2025-10-12 09:43:30,847 | INFO     | intersect: 35141544784.98324
[2025-10-12 05:44:37] 2025-10-12 09:43:30,847 | INFO     | chi2: 2.4059623509779997
[2025-10-12 05:44:37] 2025-10-12 09:43:30,848 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,848 | INFO     | sum of deviations: -1834557431.999998
[2025-10-12 05:44:37] 2025-10-12 09:43:30,848 | INFO     | mean x: 1760258327.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,849 | INFO     | mean y: 2587800.863247863
[2025-10-12 05:44:37] 2025-10-12 09:43:30,849 | INFO     | -- intersect: 6505433324.330786
[2025-10-12 05:44:37] 2025-10-12 09:43:30,849 | INFO     | intersect: 6505433324.330786
[2025-10-12 05:44:37] 2025-10-12 09:43:30,849 | INFO     | chi2: 1.5410656967636323
[2025-10-12 05:44:37] 2025-10-12 09:43:30,849 | INFO     | current chi2=1.5410656967636323 (change=35.94805437677758 %)
[2025-10-12 05:44:37] 2025-10-12 09:43:30,849 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,850 | INFO     | sum of deviations: -1274303328.5000014
[2025-10-12 05:44:37] 2025-10-12 09:43:30,850 | INFO     | mean x: 1760258174.5
[2025-10-12 05:44:37] 2025-10-12 09:43:30,850 | INFO     | mean y: 2589202.7053571427
[2025-10-12 05:44:37] 2025-10-12 09:43:30,850 | INFO     | -- intersect: 5151926239.511788
[2025-10-12 05:44:37] 2025-10-12 09:43:30,850 | INFO     | intersect: 5151926239.511788
[2025-10-12 05:44:37] 2025-10-12 09:43:30,851 | INFO     | chi2: 1.5426147824364833
[2025-10-12 05:44:37] 2025-10-12 09:43:30,851 | INFO     | current chi2=1.5426147824364833 (change=-0.10052041753341656 %)
[2025-10-12 05:44:37] 2025-10-12 09:43:30,851 | INFO     | right removable region: 111
[2025-10-12 05:44:37] 2025-10-12 09:43:30,851 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,852 | INFO     | sum of deviations: -29042957294.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,852 | INFO     | mean x: 1760258632.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,852 | INFO     | mean y: 2606960.076923077
[2025-10-12 05:44:37] 2025-10-12 09:43:30,852 | INFO     | -- intersect: 102949450845.8815
[2025-10-12 05:44:37] 2025-10-12 09:43:30,852 | INFO     | intersect: 102949450845.8815
[2025-10-12 05:44:37] 2025-10-12 09:43:30,852 | INFO     | chi2: 1.0220257617451178
[2025-10-12 05:44:37] 2025-10-12 09:43:30,853 | INFO     | current chi2=1.0220257617451178 (change=57.52112408036333 %)
[2025-10-12 05:44:37] 2025-10-12 09:43:30,853 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,853 | INFO     | sum of deviations: -27400790171.500004
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | mean x: 1760258784.5
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | mean y: 2602742.1696428573
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | -- intersect: 110726595536.99149
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | intersect: 110726595536.99149
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | chi2: 1.009467933059584
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | current chi2=1.009467933059584 (change=1.2287193880603655 %)
[2025-10-12 05:44:37] 2025-10-12 09:43:30,854 | INFO     | left removable region: 20
[2025-10-12 05:44:37] 2025-10-12 09:43:30,855 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,855 | INFO     | sum of deviations: -11159936580.000006
[2025-10-12 05:44:37] 2025-10-12 09:43:30,855 | INFO     | mean x: 1760258754.0
[2025-10-12 05:44:37] 2025-10-12 09:43:30,855 | INFO     | mean y: 2611551.6483516484
[2025-10-12 05:44:37] 2025-10-12 09:43:30,855 | INFO     | -- intersect: 84081717754.57152
[2025-10-12 05:44:37] 2025-10-12 09:43:30,856 | INFO     | intersect: 84081717754.57152
[2025-10-12 05:44:37] 2025-10-12 09:43:30,856 | INFO     | chi2: 0.08630452063953203
[2025-10-12 05:44:37] 2025-10-12 09:43:30,856 | INFO     | -- intersect: 84081717754.57152
[2025-10-12 05:44:37] 2025-10-12 09:43:30,856 | INFO     | current memory leak: -47.77 B/s (using 91 data points, chi2=0.09)
[2025-10-12 05:44:37] 2025-10-12 09:43:30,856 | INFO     | could have reported an average CPU frequency of 1949 MHz (8 samples)
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | ..............................
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . Timing measurements:
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . get job = 0 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . initial setup = 2 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . payload setup = 8 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . stage-in = 0 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . payload execution = 7413 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . stage-out = 0 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,857 | INFO     | . log creation = 0 s
[2025-10-12 05:44:37] 2025-10-12 09:43:30,858 | INFO     | ..............................
[2025-10-12 05:44:37] 2025-10-12 09:43:31,150 | INFO     | 
[2025-10-12 05:44:37] 2025-10-12 09:43:31,150 | INFO     | job summary report
[2025-10-12 05:44:37] 2025-10-12 09:43:31,150 | INFO     | --------------------------------------------------
[2025-10-12 05:44:37] 2025-10-12 09:43:31,150 | INFO     | PanDA job id: 6839318386
[2025-10-12 05:44:37] 2025-10-12 09:43:31,151 | INFO     | task id: 46676269
[2025-10-12 05:44:37] 2025-10-12 09:43:31,151 | INFO     | errors: (none)
[2025-10-12 05:44:37] 2025-10-12 09:43:31,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:44:37] 2025-10-12 09:43:31,151 | INFO     | pilot state: finished 
[2025-10-12 05:44:37] 2025-10-12 09:43:31,151 | INFO     | transexitcode: 0
[2025-10-12 05:44:37] 2025-10-12 09:43:31,152 | INFO     | exeerrorcode: 0
[2025-10-12 05:44:37] 2025-10-12 09:43:31,152 | INFO     | exeerrordiag: 
[2025-10-12 05:44:37] 2025-10-12 09:43:31,152 | INFO     | exitcode: 0
[2025-10-12 05:44:37] 2025-10-12 09:43:31,152 | INFO     | exitmsg: OK
[2025-10-12 05:44:37] 2025-10-12 09:43:31,152 | INFO     | cpuconsumptiontime: 55793 s
[2025-10-12 05:44:37] 2025-10-12 09:43:31,152 | INFO     | nevents: 400
[2025-10-12 05:44:37] 2025-10-12 09:43:31,153 | INFO     | neventsw: 0
[2025-10-12 05:44:37] 2025-10-12 09:43:31,153 | INFO     | pid: 7131
[2025-10-12 05:44:37] 2025-10-12 09:43:31,153 | INFO     | pgrp: 7131
[2025-10-12 05:44:37] 2025-10-12 09:43:31,153 | INFO     | corecount: 8
[2025-10-12 05:44:37] 2025-10-12 09:43:31,153 | INFO     | event service: False
[2025-10-12 05:44:37] 2025-10-12 09:43:31,153 | INFO     | sizes: {0: 2348681, 1: 2348880, 6: 2349142, 11: 2349170, 7425: 2376556, 7426: 2385554, 7428: 2385738, 7436: 2385932}
[2025-10-12 05:44:37] 2025-10-12 09:43:31,154 | INFO     | --------------------------------------------------
[2025-10-12 05:44:37] 2025-10-12 09:43:31,154 | INFO     | 
[2025-10-12 05:44:37] 2025-10-12 09:43:31,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:44:37] 2025-10-12 09:43:31,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | job 6839318386 has completed (purged errors)
[2025-10-12 05:44:37] 2025-10-12 09:43:31,189 | INFO     | overall cleanup function is called
[2025-10-12 05:44:37] 2025-10-12 09:43:32,197 | INFO     | --- collectZombieJob: --- 10, [7131]
[2025-10-12 05:44:37] 2025-10-12 09:43:32,197 | INFO     | zombie collector waiting for pid 7131
[2025-10-12 05:44:37] 2025-10-12 09:43:32,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:44:37] 2025-10-12 09:43:32,197 | INFO     | collected zombie processes
[2025-10-12 05:44:37] 2025-10-12 09:43:32,198 | INFO     | will attempt to kill all subprocesses of pid=7131
[2025-10-12 05:44:37] 2025-10-12 09:43:32,287 | INFO     | process IDs to be killed: [7131] (in reverse order)
[2025-10-12 05:44:37] 2025-10-12 09:43:32,344 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:44:37] 2025-10-12 09:43:32,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:44:37] 2025-10-12 09:43:32,349 | INFO     | did not find any defunct processes belonging to 7131
[2025-10-12 05:44:37] 2025-10-12 09:43:32,351 | INFO     | did not find any defunct processes belonging to 7131
[2025-10-12 05:44:37] 2025-10-12 09:43:32,351 | INFO     | ready for new job
[2025-10-12 05:44:37] 2025-10-12 09:43:32,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:44:37] 2025-10-12 09:43:32,353 | INFO     | ***************************************
[2025-10-12 05:44:37] 2025-10-12 09:43:32,353 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:44:37] 2025-10-12 09:43:32,353 | INFO     | ***************************************
[2025-10-12 05:44:37] 2025-10-12 09:43:32,353 | INFO     | 
[2025-10-12 05:44:37] 2025-10-12 09:43:32,354 | INFO     | architecture information:
[2025-10-12 05:44:37] 2025-10-12 09:43:32,354 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:44:37] 2025-10-12 09:43:32,374 | INFO     | cat /etc/os-release:
[2025-10-12 05:44:37] NAME="CentOS Linux"
[2025-10-12 05:44:37] VERSION="7 (Core)"
[2025-10-12 05:44:37] ID="centos"
[2025-10-12 05:44:37] ID_LIKE="rhel fedora"
[2025-10-12 05:44:37] VERSION_ID="7"
[2025-10-12 05:44:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:44:37] ANSI_COLOR="0;31"
[2025-10-12 05:44:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:44:37] HOME_URL="https://www.centos.org/"
[2025-10-12 05:44:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:44:37] 
[2025-10-12 05:44:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:44:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:44:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:44:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:44:37] 
[2025-10-12 05:44:37] 2025-10-12 09:43:32,374 | INFO     | ***************************************
[2025-10-12 05:44:37] 2025-10-12 09:43:32,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:44:37] 2025-10-12 09:43:32,899 | INFO     | sufficient remaining disk space (18553503744 B)
[2025-10-12 05:44:37] 2025-10-12 09:43:32,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:44:37] 2025-10-12 09:43:32,899 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:44:37] 2025-10-12 09:43:32,900 | INFO     | update_server=False
[2025-10-12 05:44:37] 2025-10-12 09:43:32,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:44:37] 2025-10-12 09:43:32,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:44:37] 2025-10-12 09:43:33,014 | INFO     | all data control threads have been joined
[2025-10-12 05:44:37] 2025-10-12 09:43:33,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:44:37] 2025-10-12 09:43:33,289 | INFO     | all payload control threads have been joined
[2025-10-12 05:44:37] 2025-10-12 09:43:33,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:44:37] 2025-10-12 09:43:33,501 | INFO     | aborting loop
[2025-10-12 05:44:37] 2025-10-12 09:43:33,906 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:33,906 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:33,974 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:33,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:34,020 | INFO     | [data] control thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:34,139 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:34,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:44:37] 2025-10-12 09:43:34,294 | INFO     | [payload] control thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:34,342 | INFO     | all job control threads have been joined
[2025-10-12 05:44:37] 2025-10-12 09:43:34,434 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:34,507 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:34,983 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:35,168 | INFO     | [job] validate thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:35,176 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:35,177 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:35,347 | INFO     | [job] control thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:36,171 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:43:37,142 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:44:37] 2025-10-12 09:44:03,719 | INFO     | PID=595 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 05:44:37] 2025-10-12 09:44:03,719 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:44:37] 2025-10-12 09:44:03,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:44:37] 2025-10-12 09:44:03,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:44:37] 2025-10-12 09:44:29,561 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:44:37] 2025-10-12 09:44:31,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954906986304)>', '<ExcThread(monitor, started 139953723930368)>']
[2025-10-12 05:44:37] 2025-10-12 09:44:31,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:44:37] 2025-10-12 09:44:31,849 | INFO     | [monitor] control thread has ended
[2025-10-12 05:44:37] 2025-10-12 09:44:36,660 | INFO     | all workflow threads have been joined
[2025-10-12 05:44:37] 2025-10-12 09:44:36,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:44:37] 2025-10-12 09:44:36,661 | INFO     | traces error code: 0
[2025-10-12 05:44:37] 2025-10-12 09:44:36,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:44:37] 2025-10-12 09:44:36,778 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:44:37] 2025-10-12 09:44:36,783 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:44:37] 2025-10-12 09:44:36,788 [wrapper] pilotpid: 595
[2025-10-12 05:44:37] 2025-10-12 09:44:36,793 [wrapper] Pilot exit status: 0
[2025-10-12 05:44:37] 2025-10-12 09:44:36,811 [wrapper] pandaids: 6839318386
[2025-10-12 05:44:37] 2025-10-12 09:44:36,867 [wrapper] cleanup supervisor_pilot   693 596
[2025-10-12 05:44:37] 2025-10-12 09:44:36,872 [wrapper] Test setup, not cleaning
[2025-10-12 05:44:37] 2025-10-12 09:44:36,877 [wrapper] apfmon messages muted
[2025-10-12 05:44:37] 2025-10-12 09:44:36,882 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:44:37] 2025-10-12 09:44:36,886 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:44:37]  *** Error codes and diagnostics ***
[2025-10-12 05:44:37]     "exeErrorCode": 0,
[2025-10-12 05:44:37]     "exeErrorDiag": "",
[2025-10-12 05:44:37]     "pilotErrorCode": 0,
[2025-10-12 05:44:37]     "pilotErrorDiag": "",
[2025-10-12 05:44:37]  *** Listing of results directory ***
[2025-10-12 05:44:37] total 414668
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 05:44:37] -rwx------ 1 boincer umatlas     36292 Oct 11 22:57 runpilot2-wrapper.sh
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:57 queuedata.json
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:44:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:38 run_atlas
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:38 job.xml
[2025-10-12 05:44:37] -rw-r--r-- 2 boincer umatlas 218514800 Oct 12 03:38 EVNT.46676267._003204.pool.root.1
[2025-10-12 05:44:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:38 start_atlas.sh
[2025-10-12 05:44:37] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:38 shared
[2025-10-12 05:44:37] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 03:38 input.tar.gz
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:38 boinc_lockfile
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas      2548 Oct 12 03:39 pandaJob.out
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas    975520 Oct 12 03:39 agis_schedconf.cvmfs.json
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas   1560580 Oct 12 03:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:44:37] drwx------ 5 boincer umatlas      4096 Oct 12 03:39 pilot3
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 05:39 init_data.xml
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas 199394666 Oct 12 05:42 HITS.46676269._069807.pool.root.1
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas       529 Oct 12 05:42 boinc_task_state.xml
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas        95 Oct 12 05:43 pilot_heartbeat.json
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas      1049 Oct 12 05:43 memory_monitor_summary.json
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas    350348 Oct 12 05:43 log.46676269._069807.job.log.tgz.1
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas      7848 Oct 12 05:43 heartbeat.json
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:44 wrapper_checkpoint.txt
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:44 boinc_mmap_file
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas      4744 Oct 12 05:44 pilotlog.txt
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas   1050447 Oct 12 05:44 log.46676269._069807.job.log.1
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas       357 Oct 12 05:44 output.list
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:44 runtime_log
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas   1423360 Oct 12 05:44 result.tar.gz
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 05:44 runtime_log.err
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas       659 Oct 12 05:44 CARNDm8R1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPPiNDm2xhWnm.diag
[2025-10-12 05:44:37] -rw-r--r-- 1 boincer umatlas     20858 Oct 12 05:44 stderr.txt
[2025-10-12 05:44:37] HITS file was successfully produced:
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas 199394666 Oct 12 05:42 shared/HITS.pool.root.1
[2025-10-12 05:44:37]  *** Contents of shared directory: ***
[2025-10-12 05:44:37] total 410092
[2025-10-12 05:44:37] -rw-r--r-- 2 boincer umatlas 218514800 Oct 12 03:38 ATLAS.root_0
[2025-10-12 05:44:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:38 start_atlas.sh
[2025-10-12 05:44:37] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 03:38 input.tar.gz
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas 199394666 Oct 12 05:42 HITS.pool.root.1
[2025-10-12 05:44:37] -rw------- 1 boincer umatlas   1423360 Oct 12 05:44 result.tar.gz
05:44:38 (29224): run_atlas exited; CPU time 55816.889511
05:44:38 (29224): called boinc_finish(0)

</stderr_txt>
]]>

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