Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:44:08 (1094749): wrapper (7.7.26015): starting
00:44:08 (1094749): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:44:08] Arguments: --nthreads 8
[2025-10-12 00:44:08] Threads: 8
[2025-10-12 00:44:08] Checking for CVMFS
[2025-10-12 00:44:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:44:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:44:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:44:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:44:10] 2.11.3.0 1859 29636 197688 151612 3 428 34656277 45568001 17766 130560 0 188603619 99.845 86351185 19492 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-12 00:44:10] CVMFS is ok
[2025-10-12 00:44:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:44:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:44:10] Further information can be found at the LHC@home message board.
[2025-10-12 00:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:44:10] Checking for apptainer binary...
[2025-10-12 00:44:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:44:10] Running /usr/bin/apptainer --version
[2025-10-12 00:44:10] apptainer version 1.4.1-1.el9
[2025-10-12 00:44:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:44:11] wns0005.triumf.lcg
[2025-10-12 00:44:11] apptainer works
[2025-10-12 00:44:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:44:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:44:11] Starting ATLAS job with PandaID=6839475007
[2025-10-12 00:44:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:50:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:50:11] 2025-10-12 07:49:37,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:50:11] 2025-10-12 07:49:37,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:50:11] 2025-10-12 07:49:37,152 | WARNING  | wrong length of table data, x=[1760255179.0], y=[1356.0] (must be same and length>=4)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | ..............................
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . Timing measurements:
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . get job = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . initial setup = 5 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . payload setup = 25 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . stage-in = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . payload execution = 78 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . stage-out = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . log creation = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | ..............................
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 00:50:11] 2025-10-12 07:49:37,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839475007/pilotlog.txt
[2025-10-12 00:50:11] 2025-10-12 07:49:37,183 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 00:50:11] - Log from pilotlog.txt -
[2025-10-12 00:50:11] 2025-10-12 07:49:37,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839475007/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | INFO     | extracted standard info from prmon json
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:50:11] 2025-10-12 07:49:37,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:50:11] 2025-10-12 07:49:37,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:50:11] 2025-10-12 07:49:37,152 | WARNING  | wrong length of table data, x=[1760255179.0], y=[1356.0] (must be same and length>=4)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | ..............................
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . Timing measurements:
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . get job = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . initial setup = 5 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . payload setup = 25 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . stage-in = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . payload execution = 78 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . stage-out = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . log creation = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | ..............................
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 00:50:11] 2025-10-12 07:49:37,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839475007/pilotlog.txt
[2025-10-12 00:50:11] 2025-10-12 07:49:37,184 | WARNING  | 
[2025-10-12 00:50:11] [begin log extracts]
[2025-10-12 00:50:11] - Log from pilotlog.txt -
[2025-10-12 00:50:11] 2025-10-12 07:49:37,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839475007/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | INFO     | extracted standard info from prmon json
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:50:11] 2025-10-12 07:49:37,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:50:11] 2025-10-12 07:49:37,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:50:11] 2025-10-12 07:49:37,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:50:11] 2025-10-12 07:49:37,152 | WARNING  | wrong length of table data, x=[1760255179.0], y=[1356.0] (must be same and length>=4)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | ..............................
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . Timing measurements:
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . get job = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . initial setup = 5 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . payload setup = 25 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . stage-in = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . payload execution = 78 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . stage-out = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | . log creation = 0 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | ..............................
[2025-10-12 00:50:11] 2025-10-12 07:49:37,153 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 00:50:11] 2025-10-12 07:49:37,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839475007/pilotlog.txt
[2025-10-12 00:50:11] [end log extracts]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,184 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,185 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 00:50:11] 2025-10-12 07:49:37,303 | INFO     | 
[2025-10-12 00:50:11] 2025-10-12 07:49:37,304 | INFO     | job summary report
[2025-10-12 00:50:11] 2025-10-12 07:49:37,304 | INFO     | --------------------------------------------------
[2025-10-12 00:50:11] 2025-10-12 07:49:37,304 | INFO     | PanDA job id: 6839475007
[2025-10-12 00:50:11] 2025-10-12 07:49:37,304 | INFO     | task id: 46676269
[2025-10-12 00:50:11] 2025-10-12 07:49:37,304 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 00:47:10,870 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 00:50:11] 2025-10-12 07:49:37,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | pilot state: failed 
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | transexitcode: 65
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | exeerrorcode: 65
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | exitcode: 65
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | nevents: 0
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | neventsw: 0
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | pid: 1105289
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | pgrp: 1105289
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | corecount: 8
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | event service: False
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 13: 2348910, 22: 2349228, 24: 2349256, 107: 2372610, 108: 2376902, 109: 2376930, 244: 2377124}
[2025-10-12 00:50:11] 2025-10-12 07:49:37,305 | INFO     | --------------------------------------------------
[2025-10-12 00:50:11] 2025-10-12 07:49:37,306 | INFO     | 
[2025-10-12 00:50:11] 2025-10-12 07:49:37,306 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:50:11] 2025-10-12 07:49:37,350 | INFO     | job 6839475007 has completed (purged errors)
[2025-10-12 00:50:11] 2025-10-12 07:49:37,351 | INFO     | overall cleanup function is called
[2025-10-12 00:50:11] 2025-10-12 07:49:38,358 | INFO     | --- collectZombieJob: --- 10, [1105289]
[2025-10-12 00:50:11] 2025-10-12 07:49:38,358 | INFO     | zombie collector waiting for pid 1105289
[2025-10-12 00:50:11] 2025-10-12 07:49:38,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:50:11] 2025-10-12 07:49:38,359 | INFO     | collected zombie processes
[2025-10-12 00:50:11] 2025-10-12 07:49:38,359 | INFO     | will attempt to kill all subprocesses of pid=1105289
[2025-10-12 00:50:11] 2025-10-12 07:49:39,029 | INFO     | process IDs to be killed: [1105289] (in reverse order)
[2025-10-12 00:50:11] 2025-10-12 07:49:39,274 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:50:11] 2025-10-12 07:49:39,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:50:11] 2025-10-12 07:49:39,286 | INFO     | did not find any defunct processes belonging to 1105289
[2025-10-12 00:50:11] 2025-10-12 07:49:39,319 | INFO     | did not find any defunct processes belonging to 1105289
[2025-10-12 00:50:11] 2025-10-12 07:49:39,319 | INFO     | ready for new job
[2025-10-12 00:50:11] 2025-10-12 07:49:39,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:50:11] 2025-10-12 07:49:39,335 | INFO     | ***************************************
[2025-10-12 00:50:11] 2025-10-12 07:49:39,336 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:50:11] 2025-10-12 07:49:39,336 | INFO     | ***************************************
[2025-10-12 00:50:11] 2025-10-12 07:49:39,336 | INFO     | 
[2025-10-12 00:50:11] 2025-10-12 07:49:39,337 | INFO     | architecture information:
[2025-10-12 00:50:11] 2025-10-12 07:49:39,354 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:50:11] 2025-10-12 07:49:39,387 | INFO     | cat /etc/os-release:
[2025-10-12 00:50:11] NAME="CentOS Linux"
[2025-10-12 00:50:11] VERSION="7 (Core)"
[2025-10-12 00:50:11] ID="centos"
[2025-10-12 00:50:11] ID_LIKE="rhel fedora"
[2025-10-12 00:50:11] VERSION_ID="7"
[2025-10-12 00:50:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:50:11] ANSI_COLOR="0;31"
[2025-10-12 00:50:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:50:11] HOME_URL="https://www.centos.org/"
[2025-10-12 00:50:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:50:11] 
[2025-10-12 00:50:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:50:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:50:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:50:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:50:11] 
[2025-10-12 00:50:11] 2025-10-12 07:49:39,388 | INFO     | ***************************************
[2025-10-12 00:50:11] 2025-10-12 07:49:39,910 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 00:50:11] 2025-10-12 07:49:40,000 | INFO     | sufficient remaining disk space (1085981851648 B)
[2025-10-12 00:50:11] 2025-10-12 07:49:40,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:50:11] 2025-10-12 07:49:40,001 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:50:11] 2025-10-12 07:49:40,001 | INFO     | update_server=False
[2025-10-12 00:50:11] 2025-10-12 07:49:40,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:50:11] 2025-10-12 07:49:40,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:50:11] 2025-10-12 07:49:40,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:50:11] 2025-10-12 07:49:40,003 | INFO     | aborting loop
[2025-10-12 00:50:11] 2025-10-12 07:49:40,231 | INFO     | all payload control threads have been joined
[2025-10-12 00:50:11] 2025-10-12 07:49:40,370 | INFO     | all data control threads have been joined
[2025-10-12 00:50:11] 2025-10-12 07:49:40,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:50:11] 2025-10-12 07:49:41,009 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,010 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,032 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,067 | INFO     | all job control threads have been joined
[2025-10-12 00:50:11] 2025-10-12 07:49:41,239 | INFO     | [payload] control thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,345 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,367 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,375 | INFO     | [data] control thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,524 | INFO     | [job] validate thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,863 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:41,877 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:42,073 | INFO     | [job] control thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:42,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:50:11] 2025-10-12 07:49:42,384 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:42,398 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:42,410 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:43,321 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:44,015 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:50:11] 2025-10-12 07:49:50,309 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:50:11] 2025-10-12 07:49:51,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782693181248)>', '<ExcThread(monitor, started 139782168495872)>']
[2025-10-12 00:50:11] 2025-10-12 07:49:56,545 | INFO     | all workflow threads have been joined
[2025-10-12 00:50:11] 2025-10-12 07:49:56,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:50:11] 2025-10-12 07:49:56,545 | INFO     | traces error code: 0
[2025-10-12 00:50:11] 2025-10-12 07:49:56,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:50:11] 2025-10-12 07:50:10,798 | INFO     | PID=1098478 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:50:11] 2025-10-12 07:50:10,798 | INFO     | .. there are 33 such processes running
[2025-10-12 00:50:11] 2025-10-12 07:50:10,799 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:50:11] 2025-10-12 07:50:10,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:50:11] 2025-10-12 07:50:10,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:50:11] 2025-10-12 07:50:10,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:50:11] 2025-10-12 07:50:10,799 | INFO     | [monitor] control thread has ended
[2025-10-12 00:50:11] 2025-10-12 07:50:11,086 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:50:11] 2025-10-12 07:50:11,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:50:11] 2025-10-12 07:50:11,130 [wrapper] pilotpid: 1098478
[2025-10-12 00:50:11] 2025-10-12 07:50:11,144 [wrapper] Pilot exit status: 0
[2025-10-12 00:50:11] 2025-10-12 07:50:11,219 [wrapper] pandaids: 6839475007
[2025-10-12 00:50:11] 2025-10-12 07:50:11,368 [wrapper] cleanup supervisor_pilot 1098484 1098479
[2025-10-12 00:50:11] 2025-10-12 07:50:11,375 [wrapper] Test setup, not cleaning
[2025-10-12 00:50:11] 2025-10-12 07:50:11,378 [wrapper] apfmon messages muted
[2025-10-12 00:50:11] 2025-10-12 07:50:11,380 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:50:11] 2025-10-12 07:50:11,381 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:50:11]  *** Error codes and diagnostics ***
[2025-10-12 00:50:11]     "exeErrorCode": 65,
[2025-10-12 00:50:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 00:50:11]     "pilotErrorCode": 1305,
[2025-10-12 00:50:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 00:50:11]  *** Listing of results directory ***
[2025-10-12 00:50:11] total 221028
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc    557409 Oct 11 21:38 pilot3.tar.gz
[2025-10-12 00:50:11] -rwx------. 1 boinc boinc     36292 Oct 11 22:20 runpilot2-wrapper.sh
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc      5112 Oct 11 22:20 queuedata.json
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc       100 Oct 12 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:50:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 00:44 run_atlas
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc       105 Oct 12 00:44 job.xml
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc      6443 Oct 12 00:44 init_data.xml
[2025-10-12 00:50:11] -rw-r--r--. 2 boinc boinc 222190551 Oct 12 00:44 EVNT.46676267._004315.pool.root.1
[2025-10-12 00:50:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 00:44 start_atlas.sh
[2025-10-12 00:50:11] drwxrwx--x. 2 boinc boinc      4096 Oct 12 00:44 shared
[2025-10-12 00:50:11] -rw-r--r--. 2 boinc boinc    569678 Oct 12 00:44 input.tar.gz
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc         0 Oct 12 00:44 boinc_lockfile
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc      2550 Oct 12 00:44 pandaJob.out
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc    975520 Oct 12 00:44 agis_schedconf.cvmfs.json
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc   1560580 Oct 12 00:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:50:11] drwx------. 5 boinc boinc      4096 Oct 12 00:44 pilot3
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc       524 Oct 12 00:47 boinc_task_state.xml
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc       959 Oct 12 00:47 memory_monitor_summary.json
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc     22617 Oct 12 00:47 log.46676269._071765.job.log.tgz.1
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc      8387 Oct 12 00:49 heartbeat.json
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc      8192 Oct 12 00:50 boinc_mmap_file
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc        23 Oct 12 00:50 wrapper_checkpoint.txt
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc        95 Oct 12 00:50 pilot_heartbeat.json
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc       823 Oct 12 00:50 pilotlog.txt
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc     96176 Oct 12 00:50 log.46676269._071765.job.log.1
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc       188 Oct 12 00:50 output.list
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc       620 Oct 12 00:50 runtime_log
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc    143360 Oct 12 00:50 result.tar.gz
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc       645 Oct 12 00:50 TrIMDmxg3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmViiNDmyjHXTo.diag
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc      8526 Oct 12 00:50 runtime_log.err
[2025-10-12 00:50:11] -rw-r--r--. 1 boinc boinc     21811 Oct 12 00:50 stderr.txt
[2025-10-12 00:50:11] No HITS result produced
[2025-10-12 00:50:11]  *** Contents of shared directory: ***
[2025-10-12 00:50:11] total 217704
[2025-10-12 00:50:11] -rw-r--r--. 2 boinc boinc 222190551 Oct 12 00:44 ATLAS.root_0
[2025-10-12 00:50:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 00:44 start_atlas.sh
[2025-10-12 00:50:11] -rw-r--r--. 2 boinc boinc    569678 Oct 12 00:44 input.tar.gz
[2025-10-12 00:50:11] -rw-------. 1 boinc boinc    143360 Oct 12 00:50 result.tar.gz
00:50:12 (1094749): run_atlas exited; CPU time 30.369097
00:50:12 (1094749): called boinc_finish(0)

</stderr_txt>
]]>

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