Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:09 (4192330): wrapper (7.7.26015): starting
11:07:09 (4192330): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 11:07:09] Arguments: --nthreads 4
[2025-10-13 11:07:09] Threads: 4
[2025-10-13 11:07:09] Checking for CVMFS
[2025-10-13 11:07:09] No cvmfs_config command found, will try listing directly
[2025-10-13 11:07:09] CVMFS is ok
[2025-10-13 11:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:07:09] Further information can be found at the LHC@home message board.
[2025-10-13 11:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:07:09] Checking for apptainer binary...
[2025-10-13 11:07:09] which: no apptainer in ((null))
[2025-10-13 11:07:09] apptainer is not installed, using version from CVMFS
[2025-10-13 11:07:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:07:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-10-13 11:07:09] apptainer works
[2025-10-13 11:07:09] Set ATHENA_PROC_NUMBER=4
[2025-10-13 11:07:09] Set ATHENA_CORE_NUMBER=4
[2025-10-13 11:07:09] Starting ATLAS job with PandaID=6839242531
[2025-10-13 11:07:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:02:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:02:33] 2025-10-13 11:45:07,539 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:02:33] 2025-10-13 11:45:07,539 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,540 | INFO     | sum of deviations: 13620174550.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,540 | INFO     | mean x: 1760351175.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,540 | INFO     | mean y: 2295812.664516129
[2025-10-13 14:02:33] 2025-10-13 11:45:07,540 | INFO     | -- intersect: -20762446525.8178
[2025-10-13 14:02:33] 2025-10-13 11:45:07,540 | INFO     | intersect: -20762446525.8178
[2025-10-13 14:02:33] 2025-10-13 11:45:07,541 | INFO     | chi2: 2.0721533065336195
[2025-10-13 14:02:33] 2025-10-13 11:45:07,541 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | sum of deviations: 22465728887.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | mean x: 1760351022.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | mean y: 2307930.1666666665
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | -- intersect: -37788562209.79886
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | intersect: -37788562209.79886
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | chi2: 1.2991584971940744
[2025-10-13 14:02:33] 2025-10-13 11:45:07,542 | INFO     | current chi2=1.2991584971940744 (change=37.30393918742632 %)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,543 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,543 | INFO     | sum of deviations: 21561343040.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | mean x: 1760350870.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | mean y: 2306566.3448275863
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | -- intersect: -40150256637.73539
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | intersect: -40150256637.73539
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | chi2: 1.2999984742459756
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | current chi2=1.2999984742459756 (change=-0.06465547150061995 %)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,544 | INFO     | right removable region: 144
[2025-10-13 14:02:33] 2025-10-13 11:45:07,545 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,545 | INFO     | sum of deviations: -5451185517.000001
[2025-10-13 14:02:33] 2025-10-13 11:45:07,545 | INFO     | mean x: 1760351327.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,546 | INFO     | mean y: 2322244.8133333335
[2025-10-13 14:02:33] 2025-10-13 11:45:07,546 | INFO     | -- intersect: 9172070562.618805
[2025-10-13 14:02:33] 2025-10-13 11:45:07,546 | INFO     | intersect: 9172070562.618805
[2025-10-13 14:02:33] 2025-10-13 11:45:07,546 | INFO     | chi2: 0.7972661555054736
[2025-10-13 14:02:33] 2025-10-13 11:45:07,546 | INFO     | current chi2=0.7972661555054736 (change=61.52475046167447 %)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,546 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,547 | INFO     | sum of deviations: -5718846257.999999
[2025-10-13 14:02:33] 2025-10-13 11:45:07,547 | INFO     | mean x: 1760351480.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,547 | INFO     | mean y: 2322655.5862068967
[2025-10-13 14:02:33] 2025-10-13 11:45:07,547 | INFO     | -- intersect: 10652235092.548206
[2025-10-13 14:02:33] 2025-10-13 11:45:07,547 | INFO     | intersect: 10652235092.548206
[2025-10-13 14:02:33] 2025-10-13 11:45:07,548 | INFO     | chi2: 0.7972140779337944
[2025-10-13 14:02:33] 2025-10-13 11:45:07,548 | INFO     | current chi2=0.7972140779337944 (change=0.006532018362955039 %)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,548 | INFO     | left removable region: 20
[2025-10-13 14:02:33] 2025-10-13 11:45:07,548 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | sum of deviations: 1737768884.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | mean x: 1760351449.5
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | mean y: 2338336.10483871
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | -- intersect: -5172254290.684654
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | intersect: -5172254290.684654
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | chi2: 0.00021025003836723605
[2025-10-13 14:02:33] 2025-10-13 11:45:07,549 | INFO     | -- intersect: -5172254290.684654
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | current memory leak: 2.94 B/s (using 124 data points, chi2=0.00)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | could have reported an average CPU frequency of 2699 MHz (9 samples)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | ..............................
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | . Timing measurements:
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | . get job = 0 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | . initial setup = 1 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | . payload setup = 8 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | . stage-in = 0 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,550 | INFO     | . payload execution = 9425 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,551 | INFO     | . stage-out = 0 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,551 | INFO     | . log creation = 0 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,551 | INFO     | ..............................
[2025-10-13 14:02:33] 2025-10-13 11:45:07,919 | INFO     | 
[2025-10-13 14:02:33] 2025-10-13 11:45:07,919 | INFO     | job summary report
[2025-10-13 14:02:33] 2025-10-13 11:45:07,919 | INFO     | --------------------------------------------------
[2025-10-13 14:02:33] 2025-10-13 11:45:07,919 | INFO     | PanDA job id: 6839242531
[2025-10-13 14:02:33] 2025-10-13 11:45:07,919 | INFO     | task id: 46676269
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | errors: (none)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | pilot state: finished 
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | transexitcode: 0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | exeerrorcode: 0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | exeerrordiag: 
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | exitcode: 0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | exitmsg: OK
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | cpuconsumptiontime: 35830 s
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | nevents: 400
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | neventsw: 0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | pid: 25596
[2025-10-13 14:02:33] 2025-10-13 11:45:07,920 | INFO     | pgrp: 25596
[2025-10-13 14:02:33] 2025-10-13 11:45:07,921 | INFO     | corecount: 4
[2025-10-13 14:02:33] 2025-10-13 11:45:07,921 | INFO     | event service: False
[2025-10-13 14:02:33] 2025-10-13 11:45:07,921 | INFO     | sizes: {0: 2348868, 1: 2348868, 7: 2349158, 11: 2349186, 9437: 2377858, 9439: 2387064, 9446: 2387266}
[2025-10-13 14:02:33] 2025-10-13 11:45:07,921 | INFO     | --------------------------------------------------
[2025-10-13 14:02:33] 2025-10-13 11:45:07,921 | INFO     | 
[2025-10-13 14:02:33] 2025-10-13 11:45:07,921 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:02:33] 2025-10-13 11:45:07,953 | INFO     | job 6839242531 has completed (purged errors)
[2025-10-13 14:02:33] 2025-10-13 11:45:07,953 | INFO     | overall cleanup function is called
[2025-10-13 14:02:33] 2025-10-13 11:45:08,962 | INFO     | --- collectZombieJob: --- 10, [25596]
[2025-10-13 14:02:33] 2025-10-13 11:45:08,962 | INFO     | zombie collector waiting for pid 25596
[2025-10-13 14:02:33] 2025-10-13 11:45:08,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:02:33] 2025-10-13 11:45:08,962 | INFO     | collected zombie processes
[2025-10-13 14:02:33] 2025-10-13 11:45:08,962 | INFO     | will attempt to kill all subprocesses of pid=25596
[2025-10-13 14:02:33] 2025-10-13 11:45:09,753 | INFO     | process IDs to be killed: [25596] (in reverse order)
[2025-10-13 14:02:33] 2025-10-13 11:45:10,009 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:02:33] 2025-10-13 11:45:10,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:02:33] 2025-10-13 11:45:10,040 | INFO     | did not find any defunct processes belonging to 25596
[2025-10-13 14:02:33] 2025-10-13 11:45:10,071 | INFO     | did not find any defunct processes belonging to 25596
[2025-10-13 14:02:33] 2025-10-13 11:45:10,071 | INFO     | ready for new job
[2025-10-13 14:02:33] 2025-10-13 11:45:10,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:02:33] 2025-10-13 11:45:10,074 | INFO     | ***************************************
[2025-10-13 14:02:33] 2025-10-13 11:45:10,074 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:02:33] 2025-10-13 11:45:10,074 | INFO     | ***************************************
[2025-10-13 14:02:33] 2025-10-13 11:45:10,074 | INFO     | 
[2025-10-13 14:02:33] 2025-10-13 11:45:10,082 | INFO     | architecture information:
[2025-10-13 14:02:33] 2025-10-13 11:45:10,083 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:02:33] 2025-10-13 11:45:10,103 | INFO     | cat /etc/os-release:
[2025-10-13 14:02:33] NAME="CentOS Linux"
[2025-10-13 14:02:33] VERSION="7 (Core)"
[2025-10-13 14:02:33] ID="centos"
[2025-10-13 14:02:33] ID_LIKE="rhel fedora"
[2025-10-13 14:02:33] VERSION_ID="7"
[2025-10-13 14:02:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:02:33] ANSI_COLOR="0;31"
[2025-10-13 14:02:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:02:33] HOME_URL="https://www.centos.org/"
[2025-10-13 14:02:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:02:33] 
[2025-10-13 14:02:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:02:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:02:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:02:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:02:33] 
[2025-10-13 14:02:33] 2025-10-13 11:45:10,104 | INFO     | ***************************************
[2025-10-13 14:02:33] 2025-10-13 11:45:10,606 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-10-13 14:02:33] 2025-10-13 11:45:10,628 | INFO     | sufficient remaining disk space (3340027035648 B)
[2025-10-13 14:02:33] 2025-10-13 11:45:10,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:02:33] 2025-10-13 11:45:10,629 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:02:33] 2025-10-13 11:45:10,629 | INFO     | update_server=False
[2025-10-13 14:02:33] 2025-10-13 11:45:10,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:02:33] 2025-10-13 11:45:10,705 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 14:02:33] 2025-10-13 11:45:10,705 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 14:02:33] 2025-10-13 11:45:10,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:02:33] 2025-10-13 11:45:10,706 | INFO     | will abort loop
[2025-10-13 14:02:33] 2025-10-13 11:45:11,035 | INFO     | all payload control threads have been joined
[2025-10-13 14:02:33] 2025-10-13 11:45:11,115 | INFO     | all data control threads have been joined
[2025-10-13 14:02:33] 2025-10-13 11:45:11,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:02:33] 2025-10-13 11:45:11,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:02:33] 2025-10-13 11:45:11,630 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:11,710 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:11,767 | INFO     | [job] validate thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:11,820 | INFO     | all job control threads have been joined
[2025-10-13 14:02:33] 2025-10-13 11:45:12,041 | INFO     | [payload] control thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:12,094 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:12,099 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:12,120 | INFO     | [data] control thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:12,171 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:12,389 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:12,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:02:33] 2025-10-13 11:45:12,826 | INFO     | [job] control thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:13,003 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:13,010 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:13,329 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:13,659 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:15,414 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:21,536 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:02:33] 2025-10-13 11:45:22,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:02:33] 2025-10-13 11:45:38,032 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:02:33] 2025-10-13 11:45:39,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22590896125760)>', '<ExcThread(monitor, started 22590661826304)>']
[2025-10-13 14:02:33] 2025-10-13 11:45:41,047 | INFO     | PID=6137 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 14:02:33] 2025-10-13 11:45:41,048 | INFO     | .. there are 9 such processes running
[2025-10-13 14:02:33] 2025-10-13 11:45:41,048 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:02:33] 2025-10-13 11:45:41,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:02:33] 2025-10-13 11:45:41,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:02:33] 2025-10-13 11:45:41,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:02:33] 2025-10-13 11:45:41,048 | INFO     | [monitor] control thread has ended
[2025-10-13 14:02:33] 2025-10-13 11:45:44,054 | INFO     | all workflow threads have been joined
[2025-10-13 14:02:33] 2025-10-13 11:45:44,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:02:33] 2025-10-13 11:45:44,055 | INFO     | traces error code: 0
[2025-10-13 14:02:33] 2025-10-13 11:45:44,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:02:33] 2025-10-13 11:45:44,206 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:02:33] 2025-10-13 11:45:44,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:02:33] 2025-10-13 11:45:44,214 [wrapper] pilotpid: 6137
[2025-10-13 14:02:33] 2025-10-13 11:45:44,218 [wrapper] Pilot exit status: 0
[2025-10-13 14:02:33] 2025-10-13 11:45:44,232 [wrapper] pandaids: 6839242531
[2025-10-13 14:02:33] 2025-10-13 11:45:44,402 [wrapper] cleanup supervisor_pilot  376348 6138
[2025-10-13 14:02:33] 2025-10-13 11:45:44,406 [wrapper] Test setup, not cleaning
[2025-10-13 14:02:33] 2025-10-13 11:45:44,410 [wrapper] apfmon messages muted
[2025-10-13 14:02:33] 2025-10-13 11:45:44,414 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:02:33] 2025-10-13 11:45:44,417 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:02:33]  *** Error codes and diagnostics ***
[2025-10-13 14:02:33]     "exeErrorCode": 0,
[2025-10-13 14:02:33]     "exeErrorDiag": "",
[2025-10-13 14:02:33]     "pilotErrorCode": 0,
[2025-10-13 14:02:33]     "pilotErrorDiag": "",
[2025-10-13 14:02:33]  *** Listing of results directory ***
[2025-10-13 14:02:33] total 413516
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:53 pilot3.tar.gz
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:59 queuedata.json
[2025-10-13 14:02:33] -rwx------ 1 boinc boinc     36292 Oct 12 03:59 runpilot2-wrapper.sh
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:02:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:07 run_atlas
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:07 job.xml
[2025-10-13 14:02:33] -rw-r--r-- 2 boinc boinc 222302288 Oct 13 11:07 EVNT.46676267._003171.pool.root.1
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc      6688 Oct 13 11:07 init_data.xml
[2025-10-13 14:02:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:07 start_atlas.sh
[2025-10-13 14:02:33] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:07 shared
[2025-10-13 14:02:33] -rw-r--r-- 2 boinc boinc    569676 Oct 13 11:07 input.tar.gz
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:07 boinc_lockfile
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc      2549 Oct 13 11:07 pandaJob.out
[2025-10-13 14:02:33] -rw------- 1 boinc boinc    972857 Oct 13 11:07 agis_schedconf.cvmfs.json
[2025-10-13 14:02:33] -rw------- 1 boinc boinc   1560580 Oct 13 11:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:02:33] drwx------ 5 boinc boinc      4096 Oct 13 11:07 pilot3
[2025-10-13 14:02:33] -rw------- 1 boinc boinc 193879594 Oct 13 13:44 HITS.46676269._069066.pool.root.1
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc       528 Oct 13 13:44 boinc_task_state.xml
[2025-10-13 14:02:33] -rw------- 1 boinc boinc        95 Oct 13 13:44 pilot_heartbeat.json
[2025-10-13 14:02:33] -rw------- 1 boinc boinc      1027 Oct 13 13:44 memory_monitor_summary.json
[2025-10-13 14:02:33] -rw------- 1 boinc boinc    345838 Oct 13 13:45 log.46676269._069066.job.log.tgz.1
[2025-10-13 14:02:33] -rw------- 1 boinc boinc      7780 Oct 13 13:45 heartbeat.json
[2025-10-13 14:02:33] -rw------- 1 boinc boinc      5090 Oct 13 13:45 pilotlog.txt
[2025-10-13 14:02:33] -rw------- 1 boinc boinc   1330109 Oct 13 13:45 log.46676269._069066.job.log.1
[2025-10-13 14:02:33] -rw------- 1 boinc boinc       357 Oct 13 13:45 output.list
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:45 runtime_log
[2025-10-13 14:02:33] -rw------- 1 boinc boinc   1699840 Oct 13 13:45 result.tar.gz
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc      9084 Oct 13 13:45 runtime_log.err
[2025-10-13 14:02:33] -rw------- 1 boinc boinc       662 Oct 13 13:45 pOWNDmyX0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuzSMDmzUa51m.diag
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc        26 Oct 13 14:02 wrapper_checkpoint.txt
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:02 boinc_mmap_file
[2025-10-13 14:02:33] -rw-r--r-- 1 boinc boinc     20655 Oct 13 14:02 stderr.txt
[2025-10-13 14:02:33] HITS file was successfully produced:
[2025-10-13 14:02:33] -rw------- 1 boinc boinc 193879594 Oct 13 13:44 shared/HITS.pool.root.1
[2025-10-13 14:02:33]  *** Contents of shared directory: ***
[2025-10-13 14:02:33] total 408676
[2025-10-13 14:02:33] -rw-r--r-- 2 boinc boinc 222302288 Oct 13 11:07 ATLAS.root_0
[2025-10-13 14:02:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:07 start_atlas.sh
[2025-10-13 14:02:33] -rw-r--r-- 2 boinc boinc    569676 Oct 13 11:07 input.tar.gz
[2025-10-13 14:02:33] -rw------- 1 boinc boinc 193879594 Oct 13 13:44 HITS.pool.root.1
[2025-10-13 14:02:33] -rw------- 1 boinc boinc   1699840 Oct 13 13:45 result.tar.gz
14:02:34 (4192330): run_atlas exited; CPU time 36489.012713
14:02:34 (4192330): called boinc_finish(0)

</stderr_txt>
]]>

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