Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:24:07 (1803417): wrapper (7.7.26015): starting
23:24:07 (1803417): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 23:24:07] Arguments: --nthreads 6
[2025-10-12 23:24:07] Threads: 6
[2025-10-12 23:24:07] Checking for CVMFS
[2025-10-12 23:24:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:24:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:24:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:24:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:24:07] 2.11.5.0 3102357 3938 89732 151623 0 188 42749611 52428801 929 130560 0 9050010 99.997 137939 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 23:24:07] CVMFS is ok
[2025-10-12 23:24:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:24:07] Checking for apptainer binary...
[2025-10-12 23:24:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:24:07] Running /usr/bin/apptainer --version
[2025-10-12 23:24:07] apptainer version 1.3.6-1.el9
[2025-10-12 23:24:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:24:07] testio002
[2025-10-12 23:24:07] apptainer works
[2025-10-12 23:24:07] Set ATHENA_PROC_NUMBER=6
[2025-10-12 23:24:07] Set ATHENA_CORE_NUMBER=6
[2025-10-12 23:24:07] Starting ATLAS job with PandaID=6839162226
[2025-10-12 23:24:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:38:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:38:28] 2025-10-12 15:37:25,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:26,486 | INFO     | time since job start (4390s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:27,926 | INFO     | monitor loop #340: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:27,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:28,491 | INFO     | time since job start (4392s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:30,429 | INFO     | monitor loop #341: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:30,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:30,496 | INFO     | time since job start (4394s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:32,501 | INFO     | time since job start (4396s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:32,932 | INFO     | monitor loop #342: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:32,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:34,507 | INFO     | time since job start (4398s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:35,433 | INFO     | monitor loop #343: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:35,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:36,512 | INFO     | time since job start (4400s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:37,936 | INFO     | monitor loop #344: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:37,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:38,517 | INFO     | time since job start (4402s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:40,439 | INFO     | monitor loop #345: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:40,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:40,522 | INFO     | time since job start (4404s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:41,602 | INFO     | PID=1807205 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:38:28] 2025-10-12 15:37:41,602 | INFO     | .. there are 2 such processes running
[2025-10-13 00:38:28] 2025-10-12 15:37:42,602 | INFO     | time since job start (4406s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:42,942 | INFO     | monitor loop #346: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:42,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:44,607 | INFO     | time since job start (4408s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:45,445 | INFO     | monitor loop #347: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:45,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:46,613 | INFO     | time since job start (4410s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:47,948 | INFO     | monitor loop #348: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:47,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:48,617 | INFO     | time since job start (4412s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:50,451 | INFO     | monitor loop #349: job 0:6839162226 is in state 'finished'
[2025-10-13 00:38:28] 2025-10-12 15:37:50,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:38:28] 2025-10-12 15:37:50,622 | INFO     | time since job start (4414s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,570 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 00:38:28] 2025-10-12 15:37:52,571 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4362.307437500001
[2025-10-13 00:38:28] 2025-10-12 15:37:52,573 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6839162226/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,573 | INFO     | extracted standard info from prmon json
[2025-10-13 00:38:28] 2025-10-12 15:37:52,573 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:38:28] 2025-10-12 15:37:52,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:38:28] 2025-10-12 15:37:52,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:38:28] 2025-10-12 15:37:52,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | sum of deviations: -4344799847.0
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | mean x: 1760281301.5
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | mean y: 2539989.59375
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | -- intersect: 94113357533.35046
[2025-10-13 00:38:28] 2025-10-12 15:37:52,575 | INFO     | intersect: 94113357533.35046
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | chi2: 0.07104275176233056
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | -- intersect: 94113357533.35046
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | current memory leak: -53.46 B/s (using 64 data points, chi2=0.07)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | could have reported an average CPU frequency of 4035 MHz (6 samples)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | ..............................
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . Timing measurements:
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . get job = 0 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . initial setup = 4 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . payload setup = 3 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . stage-in = 0 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . payload execution = 4330 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . stage-out = 0 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | . log creation = 0 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,576 | INFO     | ..............................
[2025-10-13 00:38:28] 2025-10-12 15:37:52,632 | INFO     | time since job start (4416s) is within the limit (172800.0s)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | 
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | job summary report
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | --------------------------------------------------
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | PanDA job id: 6839162226
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | task id: 46676269
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | errors: (none)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:38:28] 2025-10-12 15:37:52,638 | INFO     | pilot state: finished 
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | transexitcode: 0
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | exeerrorcode: 0
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | exeerrordiag: 
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | exitcode: 0
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | exitmsg: OK
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | cpuconsumptiontime: 23259 s
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | nevents: 400
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | neventsw: 0
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | pid: 1813986
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | pgrp: 1813986
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | corecount: 6
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | event service: False
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | sizes: {0: 2348806, 3: 2349068, 11: 2349096, 4337: 2375225, 4338: 2375224, 4340: 2384278, 4343: 2384462, 4403: 2384656}
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | --------------------------------------------------
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | 
[2025-10-13 00:38:28] 2025-10-12 15:37:52,639 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | job 6839162226 has completed (purged errors)
[2025-10-13 00:38:28] 2025-10-12 15:37:52,650 | INFO     | overall cleanup function is called
[2025-10-13 00:38:28] 2025-10-12 15:37:53,656 | INFO     | --- collectZombieJob: --- 10, [1813986]
[2025-10-13 00:38:28] 2025-10-12 15:37:53,656 | INFO     | zombie collector waiting for pid 1813986
[2025-10-13 00:38:28] 2025-10-12 15:37:53,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:38:28] 2025-10-12 15:37:53,657 | INFO     | collected zombie processes
[2025-10-13 00:38:28] 2025-10-12 15:37:53,657 | INFO     | will attempt to kill all subprocesses of pid=1813986
[2025-10-13 00:38:28] 2025-10-12 15:37:53,714 | INFO     | process IDs to be killed: [1813986] (in reverse order)
[2025-10-13 00:38:28] 2025-10-12 15:37:53,737 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:38:28] 2025-10-12 15:37:53,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:38:28] 2025-10-12 15:37:53,739 | INFO     | did not find any defunct processes belonging to 1813986
[2025-10-13 00:38:28] 2025-10-12 15:37:53,741 | INFO     | did not find any defunct processes belonging to 1813986
[2025-10-13 00:38:28] 2025-10-12 15:37:53,741 | INFO     | ready for new job
[2025-10-13 00:38:28] 2025-10-12 15:37:53,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:38:28] 2025-10-12 15:37:53,742 | INFO     | ***************************************
[2025-10-13 00:38:28] 2025-10-12 15:37:53,742 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:38:28] 2025-10-12 15:37:53,742 | INFO     | ***************************************
[2025-10-13 00:38:28] 2025-10-12 15:37:53,742 | INFO     | 
[2025-10-13 00:38:28] 2025-10-12 15:37:53,743 | INFO     | architecture information:
[2025-10-13 00:38:28] 2025-10-12 15:37:53,743 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:38:28] 2025-10-12 15:37:53,750 | INFO     | cat /etc/os-release:
[2025-10-13 00:38:28] NAME="CentOS Linux"
[2025-10-13 00:38:28] VERSION="7 (Core)"
[2025-10-13 00:38:28] ID="centos"
[2025-10-13 00:38:28] ID_LIKE="rhel fedora"
[2025-10-13 00:38:28] VERSION_ID="7"
[2025-10-13 00:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:38:28] ANSI_COLOR="0;31"
[2025-10-13 00:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:38:28] HOME_URL="https://www.centos.org/"
[2025-10-13 00:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:38:28] 
[2025-10-13 00:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:38:28] 
[2025-10-13 00:38:28] 2025-10-12 15:37:53,751 | INFO     | ***************************************
[2025-10-13 00:38:28] 2025-10-12 15:37:54,253 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | INFO     | sufficient remaining disk space (301416316928 B)
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | INFO     | update_server=False
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:38:28] 2025-10-12 15:37:54,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:38:28] 2025-10-12 15:37:54,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:38:28] 2025-10-12 15:37:54,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:38:28] 2025-10-12 15:37:54,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:38:28] 2025-10-12 15:37:54,263 | INFO     | aborting loop
[2025-10-13 00:38:28] 2025-10-12 15:37:54,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:38:28] 2025-10-12 15:37:54,741 | INFO     | all job control threads have been joined
[2025-10-13 00:38:28] 2025-10-12 15:37:54,870 | INFO     | all payload control threads have been joined
[2025-10-13 00:38:28] 2025-10-12 15:37:55,267 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:55,268 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:55,268 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:55,330 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:55,364 | INFO     | all data control threads have been joined
[2025-10-13 00:38:28] 2025-10-12 15:37:55,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:55,746 | INFO     | [job] control thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:55,875 | INFO     | [payload] control thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,213 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,313 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,369 | INFO     | [data] control thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,465 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,534 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,545 | INFO     | [job] validate thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:38:28] 2025-10-12 15:37:56,715 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:37:56,829 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:38:00,675 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:38:28] 2025-10-12 15:38:23,124 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:38:28] 2025-10-12 15:38:23,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016830777152)>', '<ExcThread(monitor, started 140016550381312)>']
[2025-10-13 00:38:28] 2025-10-12 15:38:24,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:38:28] 2025-10-12 15:38:24,406 | INFO     | [monitor] control thread has ended
[2025-10-13 00:38:28] 2025-10-12 15:38:28,862 | INFO     | all workflow threads have been joined
[2025-10-13 00:38:28] 2025-10-12 15:38:28,862 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:38:28] 2025-10-12 15:38:28,862 | INFO     | traces error code: 0
[2025-10-13 00:38:28] 2025-10-12 15:38:28,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:38:28] 2025-10-12 15:38:28,931 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:38:28] 2025-10-12 15:38:28,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:38:28] 2025-10-12 15:38:28,934 [wrapper] pilotpid: 1807205
[2025-10-13 00:38:28] 2025-10-12 15:38:28,935 [wrapper] Pilot exit status: 0
[2025-10-13 00:38:28] 2025-10-12 15:38:28,939 [wrapper] pandaids: 6839162226
[2025-10-13 00:38:28] 2025-10-12 15:38:28,953 [wrapper] cleanup supervisor_pilot 1828496 1807206
[2025-10-13 00:38:28] 2025-10-12 15:38:28,954 [wrapper] Test setup, not cleaning
[2025-10-13 00:38:28] 2025-10-12 15:38:28,955 [wrapper] apfmon messages muted
[2025-10-13 00:38:28] 2025-10-12 15:38:28,956 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:38:28] 2025-10-12 15:38:28,957 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:38:28]  *** Error codes and diagnostics ***
[2025-10-13 00:38:28]     "exeErrorCode": 0,
[2025-10-13 00:38:28]     "exeErrorDiag": "",
[2025-10-13 00:38:28]     "pilotErrorCode": 0,
[2025-10-13 00:38:28]     "pilotErrorDiag": "",
[2025-10-13 00:38:28]  *** Listing of results directory ***
[2025-10-13 00:38:28] total 412792
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:09 pilot3.tar.gz
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:12 queuedata.json
[2025-10-13 00:38:28] -rwx------. 1 boinc boinc     36292 Oct 12 08:12 runpilot2-wrapper.sh
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc       100 Oct 12 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:38:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 23:24 run_atlas
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc       105 Oct 12 23:24 job.xml
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc      9628 Oct 12 23:24 init_data.xml
[2025-10-13 00:38:28] -rw-r--r--. 2 boinc boinc 223779744 Oct 12 23:24 EVNT.46676267._002698.pool.root.1
[2025-10-13 00:38:28] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:24 start_atlas.sh
[2025-10-13 00:38:28] drwxrwx--x. 2 boinc boinc        68 Oct 12 23:24 shared
[2025-10-13 00:38:28] -rw-r--r--. 2 boinc boinc    569675 Oct 12 23:24 input.tar.gz
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc         0 Oct 12 23:24 boinc_lockfile
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc      2549 Oct 12 23:24 pandaJob.out
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc    975528 Oct 12 23:24 agis_schedconf.cvmfs.json
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc   1560580 Oct 12 23:24 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:38:28] drwx------. 5 boinc boinc      4096 Oct 12 23:24 pilot3
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc 193134027 Oct 13 00:36 HITS.46676269._066833.pool.root.1
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc       529 Oct 13 00:36 boinc_task_state.xml
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc      1029 Oct 13 00:36 memory_monitor_summary.json
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc    288179 Oct 13 00:36 log.46676269._066833.job.log.tgz.1
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc        95 Oct 13 00:37 pilot_heartbeat.json
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc      7799 Oct 13 00:37 heartbeat.json
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc      8192 Oct 13 00:38 boinc_mmap_file
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc        27 Oct 13 00:38 wrapper_checkpoint.txt
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc      4553 Oct 13 00:38 pilotlog.txt
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc    659209 Oct 13 00:38 log.46676269._066833.job.log.1
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc       357 Oct 13 00:38 output.list
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc       620 Oct 13 00:38 runtime_log
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc    962560 Oct 13 00:38 result.tar.gz
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc      8661 Oct 13 00:38 runtime_log.err
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc       642 Oct 13 00:38 aoKKDmNwxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhlSMDmnoyVln.diag
[2025-10-13 00:38:28] -rw-r--r--. 1 boinc boinc     21935 Oct 13 00:38 stderr.txt
[2025-10-13 00:38:28] HITS file was successfully produced:
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc 193134027 Oct 13 00:36 shared/HITS.pool.root.1
[2025-10-13 00:38:28]  *** Contents of shared directory: ***
[2025-10-13 00:38:28] total 408664
[2025-10-13 00:38:28] -rw-r--r--. 2 boinc boinc 223779744 Oct 12 23:24 ATLAS.root_0
[2025-10-13 00:38:28] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:24 start_atlas.sh
[2025-10-13 00:38:28] -rw-r--r--. 2 boinc boinc    569675 Oct 12 23:24 input.tar.gz
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc 193134027 Oct 13 00:36 HITS.pool.root.1
[2025-10-13 00:38:28] -rw-------. 1 boinc boinc    962560 Oct 13 00:38 result.tar.gz
00:38:30 (1803417): run_atlas exited; CPU time 23279.920922
00:38:30 (1803417): called boinc_finish(0)

</stderr_txt>
]]>

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