Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:37:39 (5250): wrapper (7.7.26015): starting
03:37:39 (5250): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:37:39] Arguments: --nthreads 12
[2025-10-12 03:37:39] Threads: 12
[2025-10-12 03:37:39] Checking for CVMFS
[2025-10-12 03:37:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:37:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:37:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:37:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:37:39] 2.11.2.0 2979 222591 104128 151612 2 57 15114256 20275200 1 130560 2 108296851 99.984 13031730 12000 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:37:39] CVMFS is ok
[2025-10-12 03:37:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:37:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:37:39] Further information can be found at the LHC@home message board.
[2025-10-12 03:37:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:37:39] Checking for apptainer binary...
[2025-10-12 03:37:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:37:39] Running /usr/bin/apptainer --version
[2025-10-12 03:37:39] apptainer version 1.3.2-1.el7
[2025-10-12 03:37:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:37:41] c-205-7.aglt2.org
[2025-10-12 03:37:41] apptainer works
[2025-10-12 03:37:41] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:37:41] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:37:41] Starting ATLAS job with PandaID=6838988961
[2025-10-12 03:37:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:57:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:57:09]  mtime=0
[2025-10-12 04:57:09]  protocol_id=None
[2025-10-12 04:57:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 04:57:09]  replicas=None
[2025-10-12 04:57:09]  scope=mc23_13p6TeV
[2025-10-12 04:57:09]  status=None
[2025-10-12 04:57:09]  status_code=0
[2025-10-12 04:57:09]  storage_token=
[2025-10-12 04:57:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838988961/log.46676269._065276.job.log.tgz.1
[2025-10-12 04:57:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/49/log.46676269._065276.job.log.tgz.1
[2025-10-12 04:57:09]  workdir=None
[2025-10-12 04:57:09] ]
[2025-10-12 04:57:09] 2025-10-12 08:56:02,258 | INFO     | transferring file log.46676269._065276.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838988961/log.46676269._065276.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 04:57:09] 2025-10-12 08:56:02,258 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838988961/log.46676269._065276.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._065276.job
[2025-10-12 04:57:09] 2025-10-12 08:56:02,280 | INFO     | adding to output.list: log.46676269._065276.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/49/log.46676269._065276.job.log.tg
[2025-10-12 04:57:09] 2025-10-12 08:56:02,281 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 04:57:09] 2025-10-12 08:56:02,282 | INFO     | summary of transferred files:
[2025-10-12 04:57:09] 2025-10-12 08:56:02,282 | INFO     |  -- lfn=log.46676269._065276.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 04:57:09] 2025-10-12 08:56:02,282 | INFO     | stage-out finished correctly
[2025-10-12 04:57:09] 2025-10-12 08:56:03,358 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 04:57:09] 2025-10-12 08:56:03,439 | INFO     | job 6838988961 has state=finished
[2025-10-12 04:57:09] 2025-10-12 08:56:03,439 | INFO     | preparing for final server update for job 6838988961 in state='finished'
[2025-10-12 04:57:09] 2025-10-12 08:56:03,510 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 04:57:09] 2025-10-12 08:56:03,511 | INFO     | this job has now completed (state=finished)
[2025-10-12 04:57:09] 2025-10-12 08:56:03,511 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 04:57:09] 2025-10-12 08:56:03,511 | INFO     | log transfer has been attempted: DONE
[2025-10-12 04:57:09] 2025-10-12 08:56:03,511 | INFO     | job 6838988961 has finished - writing final server update
[2025-10-12 04:57:09] 2025-10-12 08:56:03,512 | INFO     | total number of processed events: 400 (read)
[2025-10-12 04:57:09] 2025-10-12 08:56:03,513 | INFO     | executing command: lscpu
[2025-10-12 04:57:09] 2025-10-12 08:56:03,540 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 04:57:09] 2025-10-12 08:56:03,562 | INFO     | monitor loop #350: job 0:6838988961 is in state 'finished'
[2025-10-12 04:57:09] 2025-10-12 08:56:03,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 04:57:09] 2025-10-12 08:56:03,733 | INFO     | time since job start (4688s) is within the limit (172800.0s)
[2025-10-12 04:57:09] 2025-10-12 08:56:05,738 | INFO     | time since job start (4690s) is within the limit (172800.0s)
[2025-10-12 04:57:09] 2025-10-12 08:56:06,065 | INFO     | monitor loop #351: job 0:6838988961 is in state 'finished'
[2025-10-12 04:57:09] 2025-10-12 08:56:06,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 04:57:09] 2025-10-12 08:56:07,743 | INFO     | time since job start (4692s) is within the limit (172800.0s)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,302 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 04:57:09] 2025-10-12 08:56:08,305 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-12 04:57:09] 2025-10-12 08:56:08,308 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838988961/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,308 | INFO     | extracted standard info from prmon json
[2025-10-12 04:57:09] 2025-10-12 08:56:08,308 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:57:09] 2025-10-12 08:56:08,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:57:09] 2025-10-12 08:56:08,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:57:09] 2025-10-12 08:56:08,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:57:09] 2025-10-12 08:56:08,310 | INFO     | fitting pss+swap vs Time
[2025-10-12 04:57:09] 2025-10-12 08:56:08,311 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 04:57:09] 2025-10-12 08:56:08,311 | INFO     | sum of deviations: -4057084227.500001
[2025-10-12 04:57:09] 2025-10-12 08:56:08,311 | INFO     | mean x: 1760257113.5
[2025-10-12 04:57:09] 2025-10-12 08:56:08,311 | INFO     | mean y: 2786591.814285714
[2025-10-12 04:57:09] 2025-10-12 08:56:08,311 | INFO     | -- intersect: 67162097072.08985
[2025-10-12 04:57:09] 2025-10-12 08:56:08,311 | INFO     | intersect: 67162097072.08985
[2025-10-12 04:57:09] 2025-10-12 08:56:08,312 | INFO     | chi2: 0.20983828839271587
[2025-10-12 04:57:09] 2025-10-12 08:56:08,312 | INFO     | -- intersect: 67162097072.08985
[2025-10-12 04:57:09] 2025-10-12 08:56:08,312 | INFO     | current memory leak: -38.15 B/s (using 70 data points, chi2=0.21)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,312 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,312 | INFO     | ..............................
[2025-10-12 04:57:09] 2025-10-12 08:56:08,312 | INFO     | . Timing measurements:
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . get job = 0 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . initial setup = 2 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . payload setup = 7 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . stage-in = 0 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . payload execution = 4659 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . stage-out = 0 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | . log creation = 0 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,313 | INFO     | ..............................
[2025-10-12 04:57:09] 2025-10-12 08:56:08,597 | INFO     | 
[2025-10-12 04:57:09] 2025-10-12 08:56:08,598 | INFO     | job summary report
[2025-10-12 04:57:09] 2025-10-12 08:56:08,598 | INFO     | --------------------------------------------------
[2025-10-12 04:57:09] 2025-10-12 08:56:08,598 | INFO     | PanDA job id: 6838988961
[2025-10-12 04:57:09] 2025-10-12 08:56:08,598 | INFO     | task id: 46676269
[2025-10-12 04:57:09] 2025-10-12 08:56:08,598 | INFO     | errors: (none)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | pilot state: finished 
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | transexitcode: 0
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | exeerrorcode: 0
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | exeerrordiag: 
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | exitcode: 0
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | exitmsg: OK
[2025-10-12 04:57:09] 2025-10-12 08:56:08,599 | INFO     | cpuconsumptiontime: 47233 s
[2025-10-12 04:57:09] 2025-10-12 08:56:08,600 | INFO     | nevents: 400
[2025-10-12 04:57:09] 2025-10-12 08:56:08,600 | INFO     | neventsw: 0
[2025-10-12 04:57:09] 2025-10-12 08:56:08,600 | INFO     | pid: 15345
[2025-10-12 04:57:09] 2025-10-12 08:56:08,600 | INFO     | pgrp: 15345
[2025-10-12 04:57:09] 2025-10-12 08:56:08,600 | INFO     | corecount: 12
[2025-10-12 04:57:09] 2025-10-12 08:56:08,600 | INFO     | event service: False
[2025-10-12 04:57:09] 2025-10-12 08:56:08,601 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4669: 2375308, 4670: 2384489, 4672: 2384489, 4676: 2384683}
[2025-10-12 04:57:09] 2025-10-12 08:56:08,601 | INFO     | --------------------------------------------------
[2025-10-12 04:57:09] 2025-10-12 08:56:08,601 | INFO     | 
[2025-10-12 04:57:09] 2025-10-12 08:56:08,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 04:57:09] 2025-10-12 08:56:08,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,625 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,625 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,625 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:57:09] 2025-10-12 08:56:08,628 | INFO     | job 6838988961 has completed (purged errors)
[2025-10-12 04:57:09] 2025-10-12 08:56:08,628 | INFO     | overall cleanup function is called
[2025-10-12 04:57:09] 2025-10-12 08:56:09,636 | INFO     | --- collectZombieJob: --- 10, [15345]
[2025-10-12 04:57:09] 2025-10-12 08:56:09,637 | INFO     | zombie collector waiting for pid 15345
[2025-10-12 04:57:09] 2025-10-12 08:56:09,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:57:09] 2025-10-12 08:56:09,637 | INFO     | collected zombie processes
[2025-10-12 04:57:09] 2025-10-12 08:56:09,637 | INFO     | will attempt to kill all subprocesses of pid=15345
[2025-10-12 04:57:09] 2025-10-12 08:56:09,732 | INFO     | process IDs to be killed: [15345] (in reverse order)
[2025-10-12 04:57:09] 2025-10-12 08:56:09,782 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:57:09] 2025-10-12 08:56:09,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:57:09] 2025-10-12 08:56:09,806 | INFO     | did not find any defunct processes belonging to 15345
[2025-10-12 04:57:09] 2025-10-12 08:56:09,808 | INFO     | did not find any defunct processes belonging to 15345
[2025-10-12 04:57:09] 2025-10-12 08:56:09,808 | INFO     | ready for new job
[2025-10-12 04:57:09] 2025-10-12 08:56:09,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:57:09] 2025-10-12 08:56:09,810 | INFO     | ***************************************
[2025-10-12 04:57:09] 2025-10-12 08:56:09,810 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:57:09] 2025-10-12 08:56:09,810 | INFO     | ***************************************
[2025-10-12 04:57:09] 2025-10-12 08:56:09,810 | INFO     | 
[2025-10-12 04:57:09] 2025-10-12 08:56:09,811 | INFO     | architecture information:
[2025-10-12 04:57:09] 2025-10-12 08:56:09,811 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:57:09] 2025-10-12 08:56:09,826 | INFO     | cat /etc/os-release:
[2025-10-12 04:57:09] NAME="CentOS Linux"
[2025-10-12 04:57:09] VERSION="7 (Core)"
[2025-10-12 04:57:09] ID="centos"
[2025-10-12 04:57:09] ID_LIKE="rhel fedora"
[2025-10-12 04:57:09] VERSION_ID="7"
[2025-10-12 04:57:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:57:09] ANSI_COLOR="0;31"
[2025-10-12 04:57:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:57:09] HOME_URL="https://www.centos.org/"
[2025-10-12 04:57:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:57:09] 
[2025-10-12 04:57:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:57:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:57:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:57:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:57:09] 
[2025-10-12 04:57:09] 2025-10-12 08:56:09,826 | INFO     | ***************************************
[2025-10-12 04:57:09] 2025-10-12 08:56:10,330 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 04:57:09] 2025-10-12 08:56:10,347 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-10-12 04:57:09] 2025-10-12 08:56:10,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:57:09] 2025-10-12 08:56:10,348 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:57:09] 2025-10-12 08:56:10,348 | INFO     | update_server=False
[2025-10-12 04:57:09] 2025-10-12 08:56:10,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:57:09] 2025-10-12 08:56:10,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:57:09] 2025-10-12 08:56:10,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:57:09] 2025-10-12 08:56:10,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:57:09] 2025-10-12 08:56:10,349 | INFO     | aborting loop
[2025-10-12 04:57:09] 2025-10-12 08:56:10,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:57:09] 2025-10-12 08:56:10,766 | INFO     | all data control threads have been joined
[2025-10-12 04:57:09] 2025-10-12 08:56:11,037 | INFO     | all job control threads have been joined
[2025-10-12 04:57:09] 2025-10-12 08:56:11,354 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,354 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,355 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,417 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,423 | INFO     | [job] validate thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,567 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,658 | INFO     | all payload control threads have been joined
[2025-10-12 04:57:09] 2025-10-12 08:56:11,724 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:11,771 | INFO     | [data] control thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,043 | INFO     | [job] control thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,052 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,063 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,383 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,451 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:12,663 | INFO     | [payload] control thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:14,355 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:57:09] 2025-10-12 08:56:40,925 | INFO     | PID=8924 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 04:57:09] 2025-10-12 08:56:40,925 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:57:09] 2025-10-12 08:56:40,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:57:09] 2025-10-12 08:56:40,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:57:09] 2025-10-12 08:57:02,855 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:57:09] 2025-10-12 08:57:04,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507107141440)>', '<ExcThread(monitor, started 140506675791616)>']
[2025-10-12 04:57:09] 2025-10-12 08:57:05,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:57:09] 2025-10-12 08:57:05,018 | INFO     | [monitor] control thread has ended
[2025-10-12 04:57:09] 2025-10-12 08:57:09,080 | INFO     | all workflow threads have been joined
[2025-10-12 04:57:09] 2025-10-12 08:57:09,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:57:09] 2025-10-12 08:57:09,080 | INFO     | traces error code: 0
[2025-10-12 04:57:09] 2025-10-12 08:57:09,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:57:09] 2025-10-12 08:57:09,178 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:57:09] 2025-10-12 08:57:09,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:57:09] 2025-10-12 08:57:09,186 [wrapper] pilotpid: 8924
[2025-10-12 04:57:09] 2025-10-12 08:57:09,190 [wrapper] Pilot exit status: 0
[2025-10-12 04:57:09] 2025-10-12 08:57:09,204 [wrapper] pandaids: 6838988961
[2025-10-12 04:57:09] 2025-10-12 08:57:09,254 [wrapper] cleanup supervisor_pilot 27708 8925
[2025-10-12 04:57:09] 2025-10-12 08:57:09,259 [wrapper] Test setup, not cleaning
[2025-10-12 04:57:09] 2025-10-12 08:57:09,263 [wrapper] apfmon messages muted
[2025-10-12 04:57:09] 2025-10-12 08:57:09,267 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:57:09] 2025-10-12 08:57:09,271 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:57:09]  *** Error codes and diagnostics ***
[2025-10-12 04:57:09]     "exeErrorCode": 0,
[2025-10-12 04:57:09]     "exeErrorDiag": "",
[2025-10-12 04:57:09]     "pilotErrorCode": 0,
[2025-10-12 04:57:09]     "pilotErrorDiag": "",
[2025-10-12 04:57:09]  *** Listing of results directory ***
[2025-10-12 04:57:09] total 411532
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 17:13 pilot3.tar.gz
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:22 queuedata.json
[2025-10-12 04:57:09] -rwx------ 1 boincer umatlas     36292 Oct 11 17:23 runpilot2-wrapper.sh
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:57:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:37 run_atlas
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:37 job.xml
[2025-10-12 04:57:09] -rw-r--r-- 2 boincer umatlas 221486981 Oct 12 03:37 EVNT.46676267._002621.pool.root.1
[2025-10-12 04:57:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:37 start_atlas.sh
[2025-10-12 04:57:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:37 shared
[2025-10-12 04:57:09] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 03:37 input.tar.gz
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:37 boinc_lockfile
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 03:37 pandaJob.out
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas    975520 Oct 12 03:37 agis_schedconf.cvmfs.json
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas   1560580 Oct 12 03:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:57:09] drwx------ 5 boincer umatlas      4096 Oct 12 03:37 pilot3
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 04:48 init_data.xml
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas 193886108 Oct 12 04:55 HITS.46676269._065276.pool.root.1
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas        95 Oct 12 04:55 pilot_heartbeat.json
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas      1049 Oct 12 04:55 memory_monitor_summary.json
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas    392124 Oct 12 04:56 log.46676269._065276.job.log.tgz.1
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas       529 Oct 12 04:56 boinc_task_state.xml
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas      7851 Oct 12 04:56 heartbeat.json
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas        27 Oct 12 04:56 wrapper_checkpoint.txt
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 04:56 boinc_mmap_file
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas      4745 Oct 12 04:57 pilotlog.txt
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas    678112 Oct 12 04:57 log.46676269._065276.job.log.1
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas       357 Oct 12 04:57 output.list
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 04:57 runtime_log
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas   1085440 Oct 12 04:57 result.tar.gz
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 04:57 runtime_log.err
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas       657 Oct 12 04:57 PHGKDmhEwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5cSMDm1tYCIn.diag
[2025-10-12 04:57:09] -rw-r--r-- 1 boincer umatlas     21699 Oct 12 04:57 stderr.txt
[2025-10-12 04:57:09] HITS file was successfully produced:
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas 193886108 Oct 12 04:55 shared/HITS.pool.root.1
[2025-10-12 04:57:09]  *** Contents of shared directory: ***
[2025-10-12 04:57:09] total 407280
[2025-10-12 04:57:09] -rw-r--r-- 2 boincer umatlas 221486981 Oct 12 03:37 ATLAS.root_0
[2025-10-12 04:57:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:37 start_atlas.sh
[2025-10-12 04:57:09] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 03:37 input.tar.gz
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas 193886108 Oct 12 04:55 HITS.pool.root.1
[2025-10-12 04:57:09] -rw------- 1 boincer umatlas   1085440 Oct 12 04:57 result.tar.gz
04:57:10 (5250): run_atlas exited; CPU time 47217.058276
04:57:10 (5250): called boinc_finish(0)

</stderr_txt>
]]>

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