Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:11:22 (1551177): wrapper (7.7.26015): starting
14:11:22 (1551177): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 14:11:22] Arguments: --nthreads 4
[2025-10-12 14:11:22] Threads: 4
[2025-10-12 14:11:22] Checking for CVMFS
[2025-10-12 14:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:11:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:11:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:11:23] 2.13.2.0 428253 4338 51236 151619 1 188 2147551 4096001 2766 130560 0 14384995 99.997 271870 2463 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 14:11:23] CVMFS is ok
[2025-10-12 14:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:11:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 14:11:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 14:11:23] Further information can be found at the LHC@home message board.
[2025-10-12 14:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:11:23] Checking for apptainer binary...
[2025-10-12 14:11:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:11:23] Running /usr/bin/apptainer --version
[2025-10-12 14:11:23] apptainer version 1.4.2
[2025-10-12 14:11:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:11:23] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-12 14:11:23] apptainer works
[2025-10-12 14:11:23] Set ATHENA_PROC_NUMBER=4
[2025-10-12 14:11:23] Set ATHENA_CORE_NUMBER=4
[2025-10-12 14:11:23] Starting ATLAS job with PandaID=6839162768
[2025-10-12 14:11:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:35:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:35:45]  status=None
[2025-10-12 15:35:45]  status_code=0
[2025-10-12 15:35:45]  storage_token=
[2025-10-12 15:35:45]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6839162768/log.46676269._067191.job.log.tgz.1
[2025-10-12 15:35:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/e6/log.46676269._067191.job.log.tgz.1
[2025-10-12 15:35:45]  workdir=None
[2025-10-12 15:35:45] ]
[2025-10-12 15:35:45] 2025-10-12 13:35:00,238 | INFO     | transferring file log.46676269._067191.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6839162768/log.46676269._067191.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 15:35:45] 2025-10-12 13:35:00,238 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6839162768/log.46676269._067191.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.466762
[2025-10-12 15:35:45] 2025-10-12 13:35:00,266 | INFO     | adding to output.list: log.46676269._067191.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/e6/log.46676269._067191.job.log.tg
[2025-10-12 15:35:45] 2025-10-12 13:35:00,267 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:35:45] 2025-10-12 13:35:00,267 | INFO     | summary of transferred files:
[2025-10-12 15:35:45] 2025-10-12 13:35:00,267 | INFO     |  -- lfn=log.46676269._067191.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:35:45] 2025-10-12 13:35:00,267 | INFO     | stage-out finished correctly
[2025-10-12 15:35:45] 2025-10-12 13:35:00,532 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:35:45] 2025-10-12 13:35:00,569 | INFO     | job 6839162768 has state=finished
[2025-10-12 15:35:45] 2025-10-12 13:35:00,569 | INFO     | preparing for final server update for job 6839162768 in state='finished'
[2025-10-12 15:35:45] 2025-10-12 13:35:00,604 | INFO     | time since job start (5009s) is within the limit (172800.0s)
[2025-10-12 15:35:45] 2025-10-12 13:35:01,669 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 15:35:45] 2025-10-12 13:35:01,670 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:35:45] 2025-10-12 13:35:01,670 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:35:45] 2025-10-12 13:35:01,670 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:35:45] 2025-10-12 13:35:01,670 | INFO     | job 6839162768 has finished - writing final server update
[2025-10-12 15:35:45] 2025-10-12 13:35:01,670 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:35:45] 2025-10-12 13:35:01,672 | INFO     | executing command: lscpu
[2025-10-12 15:35:45] 2025-10-12 13:35:01,703 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:35:45] 2025-10-12 13:35:02,610 | INFO     | time since job start (5011s) is within the limit (172800.0s)
[2025-10-12 15:35:45] 2025-10-12 13:35:03,205 | WARNING  | process 1561999 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 15:35:45] 2025-10-12 13:35:03,205 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6839162768/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:35:45] 2025-10-12 13:35:03,271 | INFO     | number of running child processes to parent process 1561999: 1
[2025-10-12 15:35:45] 2025-10-12 13:35:03,271 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:35:45] 2025-10-12 13:35:04,614 | INFO     | time since job start (5013s) is within the limit (172800.0s)
[2025-10-12 15:35:45] 2025-10-12 13:35:05,776 | INFO     | monitor loop #383: job 0:6839162768 is in state 'finished'
[2025-10-12 15:35:45] 2025-10-12 13:35:05,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:35:45] 2025-10-12 13:35:06,624 | INFO     | time since job start (5015s) is within the limit (172800.0s)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,882 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:35:45] 2025-10-12 13:35:07,884 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4549.990156249998
[2025-10-12 15:35:45] 2025-10-12 13:35:07,887 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6839162768/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,887 | INFO     | extracted standard info from prmon json
[2025-10-12 15:35:45] 2025-10-12 13:35:07,887 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:35:45] 2025-10-12 13:35:07,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:35:45] 2025-10-12 13:35:07,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:35:45] 2025-10-12 13:35:07,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | sum of square deviations: 130793150.0
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | sum of deviations: -49802473.99999993
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | mean x: 1760273674.0
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | mean y: 2326912.08
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | -- intersect: 672591248.4177163
[2025-10-12 15:35:45] 2025-10-12 13:35:07,888 | INFO     | intersect: 672591248.4177163
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | chi2: 0.00254314709594909
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | -- intersect: 672591248.4177163
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | current memory leak: -0.38 B/s (using 75 data points, chi2=0.00)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | could have reported an average CPU frequency of 4502 MHz (6 samples)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | ..............................
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . Timing measurements:
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . get job = 0 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . initial setup = 1 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . payload setup = 3 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . stage-in = 0 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . payload execution = 4988 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . stage-out = 0 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | . log creation = 0 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,889 | INFO     | ..............................
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | 
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | job summary report
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | --------------------------------------------------
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | PanDA job id: 6839162768
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | task id: 46676269
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | errors: (none)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | pilot state: finished 
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | transexitcode: 0
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | exeerrorcode: 0
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | exeerrordiag: 
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | exitcode: 0
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | exitmsg: OK
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | cpuconsumptiontime: 19310 s
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | nevents: 400
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | neventsw: 0
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | pid: 1561999
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | pgrp: 1561999
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | corecount: 4
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | event service: False
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | sizes: {0: 2348864, 1: 2348864, 3: 2349154, 11: 2349182, 4995: 2384656, 5003: 2384794}
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | --------------------------------------------------
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | 
[2025-10-12 15:35:45] 2025-10-12 13:35:07,928 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,978 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:35:45] 2025-10-12 13:35:07,978 | INFO     | job 6839162768 has completed (purged errors)
[2025-10-12 15:35:45] 2025-10-12 13:35:07,978 | INFO     | overall cleanup function is called
[2025-10-12 15:35:45] 2025-10-12 13:35:08,984 | INFO     | --- collectZombieJob: --- 10, [1561999]
[2025-10-12 15:35:45] 2025-10-12 13:35:08,984 | INFO     | zombie collector waiting for pid 1561999
[2025-10-12 15:35:45] 2025-10-12 13:35:08,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:35:45] 2025-10-12 13:35:08,985 | INFO     | collected zombie processes
[2025-10-12 15:35:45] 2025-10-12 13:35:08,985 | INFO     | will attempt to kill all subprocesses of pid=1561999
[2025-10-12 15:35:45] 2025-10-12 13:35:09,056 | INFO     | process IDs to be killed: [1561999] (in reverse order)
[2025-10-12 15:35:45] 2025-10-12 13:35:09,175 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:35:45] 2025-10-12 13:35:09,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:35:45] 2025-10-12 13:35:09,177 | INFO     | did not find any defunct processes belonging to 1561999
[2025-10-12 15:35:45] 2025-10-12 13:35:09,179 | INFO     | did not find any defunct processes belonging to 1561999
[2025-10-12 15:35:45] 2025-10-12 13:35:09,179 | INFO     | ready for new job
[2025-10-12 15:35:45] 2025-10-12 13:35:09,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:35:45] 2025-10-12 13:35:09,179 | INFO     | ***************************************
[2025-10-12 15:35:45] 2025-10-12 13:35:09,179 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:35:45] 2025-10-12 13:35:09,180 | INFO     | ***************************************
[2025-10-12 15:35:45] 2025-10-12 13:35:09,180 | INFO     | 
[2025-10-12 15:35:45] 2025-10-12 13:35:09,180 | INFO     | architecture information:
[2025-10-12 15:35:45] 2025-10-12 13:35:09,184 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:35:45] 2025-10-12 13:35:09,211 | INFO     | cat /etc/os-release:
[2025-10-12 15:35:45] NAME="CentOS Linux"
[2025-10-12 15:35:45] VERSION="7 (Core)"
[2025-10-12 15:35:45] ID="centos"
[2025-10-12 15:35:45] ID_LIKE="rhel fedora"
[2025-10-12 15:35:45] VERSION_ID="7"
[2025-10-12 15:35:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:35:45] ANSI_COLOR="0;31"
[2025-10-12 15:35:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:35:45] HOME_URL="https://www.centos.org/"
[2025-10-12 15:35:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:35:45] 
[2025-10-12 15:35:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:35:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:35:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:35:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:35:45] 
[2025-10-12 15:35:45] 2025-10-12 13:35:09,212 | INFO     | ***************************************
[2025-10-12 15:35:45] 2025-10-12 13:35:09,713 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-12 15:35:45] 2025-10-12 13:35:09,728 | INFO     | sufficient remaining disk space (1766114459648 B)
[2025-10-12 15:35:45] 2025-10-12 13:35:09,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:35:45] 2025-10-12 13:35:09,728 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:35:45] 2025-10-12 13:35:09,729 | INFO     | update_server=False
[2025-10-12 15:35:45] 2025-10-12 13:35:09,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:35:45] 2025-10-12 13:35:09,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:35:45] 2025-10-12 13:35:09,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:35:45] 2025-10-12 13:35:09,732 | INFO     | aborting loop
[2025-10-12 15:35:45] 2025-10-12 13:35:09,807 | INFO     | all payload control threads have been joined
[2025-10-12 15:35:45] 2025-10-12 13:35:09,848 | INFO     | all data control threads have been joined
[2025-10-12 15:35:45] 2025-10-12 13:35:10,734 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:10,736 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:10,737 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:10,812 | INFO     | [payload] control thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:10,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:35:45] 2025-10-12 13:35:10,853 | INFO     | [data] control thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:11,051 | INFO     | all job control threads have been joined
[2025-10-12 15:35:45] 2025-10-12 13:35:11,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:35:45] 2025-10-12 13:35:11,350 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:11,369 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:11,523 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:11,634 | INFO     | [job] validate thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:11,830 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:11,831 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:12,056 | INFO     | [job] control thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:12,107 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:12,833 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:15,082 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:20,434 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:35:45] 2025-10-12 13:35:21,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:35:45] 2025-10-12 13:35:39,082 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:35:45] 2025-10-12 13:35:39,773 | INFO     | PID=1555354 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:35:45] 2025-10-12 13:35:39,773 | INFO     | .. there are 4 such processes running
[2025-10-12 15:35:45] 2025-10-12 13:35:39,774 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:35:45] 2025-10-12 13:35:39,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:35:45] 2025-10-12 13:35:39,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:35:45] 2025-10-12 13:35:40,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126093302990656)>', '<ExcThread(monitor, started 126092941694720)>']
[2025-10-12 15:35:45] 2025-10-12 13:35:40,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:35:45] 2025-10-12 13:35:40,778 | INFO     | [monitor] control thread has ended
[2025-10-12 15:35:45] 2025-10-12 13:35:45,276 | INFO     | all workflow threads have been joined
[2025-10-12 15:35:45] 2025-10-12 13:35:45,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:35:45] 2025-10-12 13:35:45,277 | INFO     | traces error code: 0
[2025-10-12 15:35:45] 2025-10-12 13:35:45,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:35:45] 2025-10-12 13:35:45,422 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:35:45] 2025-10-12 13:35:45,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:35:45] 2025-10-12 13:35:45,438 [wrapper] pilotpid: 1555354
[2025-10-12 15:35:45] 2025-10-12 13:35:45,443 [wrapper] Pilot exit status: 0
[2025-10-12 15:35:45] 2025-10-12 13:35:45,453 [wrapper] pandaids: 6839162768
[2025-10-12 15:35:45] 2025-10-12 13:35:45,495 [wrapper] cleanup supervisor_pilot 1647179 1555355
[2025-10-12 15:35:45] 2025-10-12 13:35:45,502 [wrapper] Test setup, not cleaning
[2025-10-12 15:35:45] 2025-10-12 13:35:45,507 [wrapper] apfmon messages muted
[2025-10-12 15:35:45] 2025-10-12 13:35:45,522 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:35:45] 2025-10-12 13:35:45,527 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:35:45]  *** Error codes and diagnostics ***
[2025-10-12 15:35:45]     "exeErrorCode": 0,
[2025-10-12 15:35:45]     "exeErrorDiag": "",
[2025-10-12 15:35:45]     "pilotErrorCode": 0,
[2025-10-12 15:35:45]     "pilotErrorDiag": "",
[2025-10-12 15:35:45]  *** Listing of results directory ***
[2025-10-12 15:35:45] total 414084
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc    557409 Oct 12 01:21 pilot3.tar.gz
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:45 queuedata.json
[2025-10-12 15:35:45] -rwx------ 1 boinc boinc     36292 Oct 12 01:45 runpilot2-wrapper.sh
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:35:45] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:11 run_atlas
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:11 job.xml
[2025-10-12 15:35:45] -rw-r--r-- 2 boinc boinc 221073018 Oct 12 14:11 EVNT.46676267._002731.pool.root.1
[2025-10-12 15:35:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:11 start_atlas.sh
[2025-10-12 15:35:45] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:11 shared
[2025-10-12 15:35:45] -rw-r--r-- 2 boinc boinc    569678 Oct 12 14:11 input.tar.gz
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:11 boinc_lockfile
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:11 pandaJob.out
[2025-10-12 15:35:45] -rw------- 1 boinc boinc    975520 Oct 12 14:11 agis_schedconf.cvmfs.json
[2025-10-12 15:35:45] -rw------- 1 boinc boinc   1560580 Oct 12 14:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:35:45] drwx------ 5 boinc boinc      4096 Oct 12 14:11 pilot3
[2025-10-12 15:35:45] -rw------- 1 boinc boinc 196968451 Oct 12 15:34 HITS.46676269._067191.pool.root.1
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc      9520 Oct 12 15:34 init_data.xml
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc       530 Oct 12 15:34 boinc_task_state.xml
[2025-10-12 15:35:45] -rw------- 1 boinc boinc      1026 Oct 12 15:34 memory_monitor_summary.json
[2025-10-12 15:35:45] -rw------- 1 boinc boinc    277988 Oct 12 15:35 log.46676269._067191.job.log.tgz.1
[2025-10-12 15:35:45] -rw------- 1 boinc boinc        95 Oct 12 15:35 pilot_heartbeat.json
[2025-10-12 15:35:45] -rw------- 1 boinc boinc      7779 Oct 12 15:35 heartbeat.json
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:35 wrapper_checkpoint.txt
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:35 boinc_mmap_file
[2025-10-12 15:35:45] -rw------- 1 boinc boinc      4904 Oct 12 15:35 pilotlog.txt
[2025-10-12 15:35:45] -rw------- 1 boinc boinc    755970 Oct 12 15:35 log.46676269._067191.job.log.1
[2025-10-12 15:35:45] -rw------- 1 boinc boinc       357 Oct 12 15:35 output.list
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:35 runtime_log
[2025-10-12 15:35:45] -rw------- 1 boinc boinc   1054720 Oct 12 15:35 result.tar.gz
[2025-10-12 15:35:45] -rw------- 1 boinc boinc       657 Oct 12 15:35 uNBLDmGSyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5zhNDmKaLXmm.diag
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc      8841 Oct 12 15:35 runtime_log.err
[2025-10-12 15:35:45] -rw-r--r-- 1 boinc boinc     22071 Oct 12 15:35 stderr.txt
[2025-10-12 15:35:45] HITS file was successfully produced:
[2025-10-12 15:35:45] -rw------- 1 boinc boinc 196968451 Oct 12 15:34 shared/HITS.pool.root.1
[2025-10-12 15:35:45]  *** Contents of shared directory: ***
[2025-10-12 15:35:45] total 409864
[2025-10-12 15:35:45] -rw-r--r-- 2 boinc boinc 221073018 Oct 12 14:11 ATLAS.root_0
[2025-10-12 15:35:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:11 start_atlas.sh
[2025-10-12 15:35:45] -rw-r--r-- 2 boinc boinc    569678 Oct 12 14:11 input.tar.gz
[2025-10-12 15:35:45] -rw------- 1 boinc boinc 196968451 Oct 12 15:34 HITS.pool.root.1
[2025-10-12 15:35:45] -rw------- 1 boinc boinc   1054720 Oct 12 15:35 result.tar.gz
15:35:47 (1551177): run_atlas exited; CPU time 19333.379135
15:35:47 (1551177): called boinc_finish(0)

</stderr_txt>
]]>

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