Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:27:29 (30668): wrapper (7.7.26015): starting
03:27:29 (30668): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 03:27:29] Arguments: --nthreads 8
[2025-10-12 03:27:29] Threads: 8
[2025-10-12 03:27:29] Checking for CVMFS
[2025-10-12 03:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:27:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:27:29] 2.11.2.0 2800 222581 117380 151612 3 57 13806734 20275200 1 130560 1 78793919 99.974 14663015 12651 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:27:29] CVMFS is ok
[2025-10-12 03:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:27:29] Further information can be found at the LHC@home message board.
[2025-10-12 03:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:27:29] Checking for apptainer binary...
[2025-10-12 03:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:27:29] Running /usr/bin/apptainer --version
[2025-10-12 03:27:29] apptainer version 1.3.2-1.el7
[2025-10-12 03:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:27:31] c-204-36.aglt2.org
[2025-10-12 03:27:31] apptainer works
[2025-10-12 03:27:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 03:27:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 03:27:31] Starting ATLAS job with PandaID=6839163261
[2025-10-12 03:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:44:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:44:07] 2025-10-12 09:43:07,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:44:07] 2025-10-12 09:43:07,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:44:07] 2025-10-12 09:43:07,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:44:07] 2025-10-12 09:43:07,907 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:44:07] 2025-10-12 09:43:07,907 | INFO     | sum of square deviations: 729472282.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,908 | INFO     | sum of deviations: -14107750905.000004
[2025-10-12 05:44:07] 2025-10-12 09:43:07,909 | INFO     | mean x: 1760258124.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,909 | INFO     | mean y: 2534598.5187969925
[2025-10-12 05:44:07] 2025-10-12 09:43:07,909 | INFO     | -- intersect: 34045340274.162838
[2025-10-12 05:44:07] 2025-10-12 09:43:07,909 | INFO     | intersect: 34045340274.162838
[2025-10-12 05:44:07] 2025-10-12 09:43:07,909 | INFO     | chi2: 2.6009789900410794
[2025-10-12 05:44:07] 2025-10-12 09:43:07,910 | INFO     | sum of square deviations: 650252192.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,911 | INFO     | sum of deviations: -4275285406.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,911 | INFO     | mean x: 1760257971.5
[2025-10-12 05:44:07] 2025-10-12 09:43:07,911 | INFO     | mean y: 2553013.515625
[2025-10-12 05:44:07] 2025-10-12 09:43:07,911 | INFO     | -- intersect: 11575916869.779434
[2025-10-12 05:44:07] 2025-10-12 09:43:07,911 | INFO     | intersect: 11575916869.779434
[2025-10-12 05:44:07] 2025-10-12 09:43:07,912 | INFO     | chi2: 1.841572437943991
[2025-10-12 05:44:07] 2025-10-12 09:43:07,912 | INFO     | current chi2=1.841572437943991 (change=29.196950648382376 %)
[2025-10-12 05:44:07] 2025-10-12 09:43:07,912 | INFO     | sum of square deviations: 576985702.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,913 | INFO     | sum of deviations: -3378397465.0000033
[2025-10-12 05:44:07] 2025-10-12 09:43:07,913 | INFO     | mean x: 1760257819.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,913 | INFO     | mean y: 2554881.3333333335
[2025-10-12 05:44:07] 2025-10-12 09:43:07,913 | INFO     | -- intersect: 10309310374.307465
[2025-10-12 05:44:07] 2025-10-12 09:43:07,914 | INFO     | intersect: 10309310374.307465
[2025-10-12 05:44:07] 2025-10-12 09:43:07,914 | INFO     | chi2: 1.8434001918145526
[2025-10-12 05:44:07] 2025-10-12 09:43:07,914 | INFO     | current chi2=1.8434001918145526 (change=-0.09924963215686133 %)
[2025-10-12 05:44:07] 2025-10-12 09:43:07,914 | INFO     | right removable region: 122
[2025-10-12 05:44:07] 2025-10-12 09:43:07,915 | INFO     | sum of square deviations: 650252192.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,915 | INFO     | sum of deviations: -36882020171.5
[2025-10-12 05:44:07] 2025-10-12 09:43:07,916 | INFO     | mean x: 1760258276.5
[2025-10-12 05:44:07] 2025-10-12 09:43:07,916 | INFO     | mean y: 2577808.8984375
[2025-10-12 05:44:07] 2025-10-12 09:43:07,916 | INFO     | -- intersect: 99843658023.08528
[2025-10-12 05:44:07] 2025-10-12 09:43:07,916 | INFO     | intersect: 99843658023.08528
[2025-10-12 05:44:07] 2025-10-12 09:43:07,916 | INFO     | chi2: 0.9497959171838704
[2025-10-12 05:44:07] 2025-10-12 09:43:07,916 | INFO     | current chi2=0.9497959171838704 (change=63.4831376639121 %)
[2025-10-12 05:44:07] 2025-10-12 09:43:07,917 | INFO     | sum of square deviations: 576985702.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,917 | INFO     | sum of deviations: -36500356561.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,917 | INFO     | mean x: 1760258429.0
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | mean y: 2576893.211382114
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | -- intersect: 111357260510.6673
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | intersect: 111357260510.6673
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | chi2: 0.9177486824966938
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | current chi2=0.9177486824966938 (change=3.3741179665412813 %)
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | left removable region: 20
[2025-10-12 05:44:07] 2025-10-12 09:43:07,918 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 05:44:07] 2025-10-12 09:43:07,919 | INFO     | sum of deviations: -18851000921.999996
[2025-10-12 05:44:07] 2025-10-12 09:43:07,919 | INFO     | mean x: 1760258398.5
[2025-10-12 05:44:07] 2025-10-12 09:43:07,919 | INFO     | mean y: 2586968.31372549
[2025-10-12 05:44:07] 2025-10-12 09:43:07,919 | INFO     | -- intersect: 100852062855.2556
[2025-10-12 05:44:07] 2025-10-12 09:43:07,919 | INFO     | intersect: 100852062855.2556
[2025-10-12 05:44:07] 2025-10-12 09:43:07,920 | INFO     | chi2: 0.10421972894411091
[2025-10-12 05:44:07] 2025-10-12 09:43:07,920 | INFO     | -- intersect: 100852062855.2556
[2025-10-12 05:44:07] 2025-10-12 09:43:07,920 | INFO     | current memory leak: -57.29 B/s (using 102 data points, chi2=0.10)
[2025-10-12 05:44:07] 2025-10-12 09:43:07,920 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | ..............................
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . Timing measurements:
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . get job = 0 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . initial setup = 2 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . payload setup = 7 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . stage-in = 0 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . payload execution = 8081 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . stage-out = 0 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,921 | INFO     | . log creation = 0 s
[2025-10-12 05:44:07] 2025-10-12 09:43:07,922 | INFO     | ..............................
[2025-10-12 05:44:07] 2025-10-12 09:43:08,015 | INFO     | 
[2025-10-12 05:44:07] 2025-10-12 09:43:08,015 | INFO     | job summary report
[2025-10-12 05:44:07] 2025-10-12 09:43:08,015 | INFO     | --------------------------------------------------
[2025-10-12 05:44:07] 2025-10-12 09:43:08,015 | INFO     | PanDA job id: 6839163261
[2025-10-12 05:44:07] 2025-10-12 09:43:08,015 | INFO     | task id: 46676269
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | errors: (none)
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | pilot state: finished 
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | transexitcode: 0
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | exeerrorcode: 0
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | exeerrordiag: 
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | exitcode: 0
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | exitmsg: OK
[2025-10-12 05:44:07] 2025-10-12 09:43:08,016 | INFO     | cpuconsumptiontime: 56823 s
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | nevents: 400
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | neventsw: 0
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | pid: 8532
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | pgrp: 8532
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | corecount: 8
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | event service: False
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | sizes: {0: 2348684, 1: 2348883, 6: 2349145, 12: 2349173, 8093: 2376941, 8094: 2385939, 8097: 2386123, 8103: 2386317}
[2025-10-12 05:44:07] 2025-10-12 09:43:08,017 | INFO     | --------------------------------------------------
[2025-10-12 05:44:07] 2025-10-12 09:43:08,018 | INFO     | 
[2025-10-12 05:44:07] 2025-10-12 09:43:08,018 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:44:07] 2025-10-12 09:43:08,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,045 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,045 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:44:07] 2025-10-12 09:43:08,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:44:07] 2025-10-12 09:43:08,048 | INFO     | job 6839163261 has completed (purged errors)
[2025-10-12 05:44:07] 2025-10-12 09:43:08,048 | INFO     | overall cleanup function is called
[2025-10-12 05:44:07] 2025-10-12 09:43:09,056 | INFO     | --- collectZombieJob: --- 10, [8532]
[2025-10-12 05:44:07] 2025-10-12 09:43:09,056 | INFO     | zombie collector waiting for pid 8532
[2025-10-12 05:44:07] 2025-10-12 09:43:09,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:44:07] 2025-10-12 09:43:09,056 | INFO     | collected zombie processes
[2025-10-12 05:44:07] 2025-10-12 09:43:09,056 | INFO     | will attempt to kill all subprocesses of pid=8532
[2025-10-12 05:44:07] 2025-10-12 09:43:09,154 | INFO     | process IDs to be killed: [8532] (in reverse order)
[2025-10-12 05:44:07] 2025-10-12 09:43:09,210 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:44:07] 2025-10-12 09:43:09,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:44:07] 2025-10-12 09:43:09,216 | INFO     | did not find any defunct processes belonging to 8532
[2025-10-12 05:44:07] 2025-10-12 09:43:09,219 | INFO     | did not find any defunct processes belonging to 8532
[2025-10-12 05:44:07] 2025-10-12 09:43:09,219 | INFO     | ready for new job
[2025-10-12 05:44:07] 2025-10-12 09:43:09,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:44:07] 2025-10-12 09:43:09,222 | INFO     | ***************************************
[2025-10-12 05:44:07] 2025-10-12 09:43:09,222 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:44:07] 2025-10-12 09:43:09,222 | INFO     | ***************************************
[2025-10-12 05:44:07] 2025-10-12 09:43:09,222 | INFO     | 
[2025-10-12 05:44:07] 2025-10-12 09:43:09,223 | INFO     | architecture information:
[2025-10-12 05:44:07] 2025-10-12 09:43:09,224 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:44:07] 2025-10-12 09:43:09,242 | INFO     | cat /etc/os-release:
[2025-10-12 05:44:07] NAME="CentOS Linux"
[2025-10-12 05:44:07] VERSION="7 (Core)"
[2025-10-12 05:44:07] ID="centos"
[2025-10-12 05:44:07] ID_LIKE="rhel fedora"
[2025-10-12 05:44:07] VERSION_ID="7"
[2025-10-12 05:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:44:07] ANSI_COLOR="0;31"
[2025-10-12 05:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:44:07] HOME_URL="https://www.centos.org/"
[2025-10-12 05:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:44:07] 
[2025-10-12 05:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:44:07] 
[2025-10-12 05:44:07] 2025-10-12 09:43:09,242 | INFO     | ***************************************
[2025-10-12 05:44:07] 2025-10-12 09:43:09,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:44:07] 2025-10-12 09:43:09,764 | INFO     | sufficient remaining disk space (18560843776 B)
[2025-10-12 05:44:07] 2025-10-12 09:43:09,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:44:07] 2025-10-12 09:43:09,765 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:44:07] 2025-10-12 09:43:09,765 | INFO     | update_server=False
[2025-10-12 05:44:07] 2025-10-12 09:43:09,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:44:07] 2025-10-12 09:43:09,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:44:07] 2025-10-12 09:43:09,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:44:07] 2025-10-12 09:43:09,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:44:07] 2025-10-12 09:43:09,767 | INFO     | aborting loop
[2025-10-12 05:44:07] 2025-10-12 09:43:09,795 | INFO     | all job control threads have been joined
[2025-10-12 05:44:07] 2025-10-12 09:43:10,316 | INFO     | all data control threads have been joined
[2025-10-12 05:44:07] 2025-10-12 09:43:10,768 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:10,771 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:10,772 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:10,800 | INFO     | [job] control thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:11,092 | INFO     | all payload control threads have been joined
[2025-10-12 05:44:07] 2025-10-12 09:43:11,255 | INFO     | [job] validate thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:11,321 | INFO     | [data] control thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:11,428 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:11,772 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:11,827 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:11,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:44:07] 2025-10-12 09:43:12,017 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:12,023 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:12,097 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:12,098 | INFO     | [payload] control thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:12,367 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:15,992 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:19,890 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:44:07] 2025-10-12 09:43:20,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:44:07] 2025-10-12 09:43:40,301 | INFO     | PID=2037 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 05:44:07] 2025-10-12 09:43:40,303 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:44:07] 2025-10-12 09:43:40,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:44:07] 2025-10-12 09:43:40,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:44:07] 2025-10-12 09:44:01,048 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:44:07] 2025-10-12 09:44:02,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140167102863168)>', '<ExcThread(monitor, started 140165787940608)>']
[2025-10-12 05:44:07] 2025-10-12 09:44:02,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:44:07] 2025-10-12 09:44:02,396 | INFO     | [monitor] control thread has ended
[2025-10-12 05:44:07] 2025-10-12 09:44:07,132 | INFO     | all workflow threads have been joined
[2025-10-12 05:44:07] 2025-10-12 09:44:07,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:44:07] 2025-10-12 09:44:07,133 | INFO     | traces error code: 0
[2025-10-12 05:44:07] 2025-10-12 09:44:07,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:44:07] 2025-10-12 09:44:07,264 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:44:07] 2025-10-12 09:44:07,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:44:07] 2025-10-12 09:44:07,272 [wrapper] pilotpid: 2037
[2025-10-12 05:44:07] 2025-10-12 09:44:07,277 [wrapper] Pilot exit status: 0
[2025-10-12 05:44:07] 2025-10-12 09:44:07,296 [wrapper] pandaids: 6839163261
[2025-10-12 05:44:07] 2025-10-12 09:44:07,347 [wrapper] cleanup supervisor_pilot 20264 2038
[2025-10-12 05:44:07] 2025-10-12 09:44:07,352 [wrapper] Test setup, not cleaning
[2025-10-12 05:44:07] 2025-10-12 09:44:07,356 [wrapper] apfmon messages muted
[2025-10-12 05:44:07] 2025-10-12 09:44:07,361 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:44:07] 2025-10-12 09:44:07,365 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:44:07]  *** Error codes and diagnostics ***
[2025-10-12 05:44:07]     "exeErrorCode": 0,
[2025-10-12 05:44:07]     "exeErrorDiag": "",
[2025-10-12 05:44:07]     "pilotErrorCode": 0,
[2025-10-12 05:44:07]     "pilotErrorDiag": "",
[2025-10-12 05:44:07]  *** Listing of results directory ***
[2025-10-12 05:44:07] total 410492
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:13 queuedata.json
[2025-10-12 05:44:07] -rwx------ 1 boincer umatlas     36292 Oct 11 20:14 runpilot2-wrapper.sh
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:44:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:27 run_atlas
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:27 job.xml
[2025-10-12 05:44:07] -rw-r--r-- 2 boincer umatlas 219801294 Oct 12 03:27 EVNT.46676267._002750.pool.root.1
[2025-10-12 05:44:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 03:27 input.tar.gz
[2025-10-12 05:44:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:27 start_atlas.sh
[2025-10-12 05:44:07] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:27 shared
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:27 boinc_lockfile
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 03:27 pandaJob.out
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas    975520 Oct 12 03:27 agis_schedconf.cvmfs.json
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas   1560580 Oct 12 03:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:44:07] drwx------ 5 boincer umatlas      4096 Oct 12 03:27 pilot3
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 05:39 init_data.xml
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas 193627830 Oct 12 05:42 HITS.46676269._067425.pool.root.1
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas       529 Oct 12 05:42 boinc_task_state.xml
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas      1051 Oct 12 05:42 memory_monitor_summary.json
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas    363740 Oct 12 05:42 log.46676269._067425.job.log.tgz.1
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas      7852 Oct 12 05:43 heartbeat.json
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas        95 Oct 12 05:43 pilot_heartbeat.json
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:44 wrapper_checkpoint.txt
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:44 boinc_mmap_file
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas      4817 Oct 12 05:44 pilotlog.txt
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas   1140041 Oct 12 05:44 log.46676269._067425.job.log.1
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas       357 Oct 12 05:44 output.list
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:44 runtime_log
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas   1525760 Oct 12 05:44 result.tar.gz
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 05:44 runtime_log.err
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas       661 Oct 12 05:44 DPeMDmFuyR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3pSMDm693a9n.diag
[2025-10-12 05:44:07] -rw-r--r-- 1 boincer umatlas     20839 Oct 12 05:44 stderr.txt
[2025-10-12 05:44:07] HITS file was successfully produced:
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas 193627830 Oct 12 05:42 shared/HITS.pool.root.1
[2025-10-12 05:44:07]  *** Contents of shared directory: ***
[2025-10-12 05:44:07] total 405816
[2025-10-12 05:44:07] -rw-r--r-- 2 boincer umatlas 219801294 Oct 12 03:27 ATLAS.root_0
[2025-10-12 05:44:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 03:27 input.tar.gz
[2025-10-12 05:44:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:27 start_atlas.sh
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas 193627830 Oct 12 05:42 HITS.pool.root.1
[2025-10-12 05:44:07] -rw------- 1 boincer umatlas   1525760 Oct 12 05:44 result.tar.gz
05:44:08 (30668): run_atlas exited; CPU time 56651.560389
05:44:08 (30668): called boinc_finish(0)

</stderr_txt>
]]>

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