Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:14:34 (3557081): wrapper (7.7.26015): starting
05:14:34 (3557081): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 05:14:34] Arguments: --nthreads 5
[2025-10-12 05:14:34] Threads: 5
[2025-10-12 05:14:34] Checking for CVMFS
[2025-10-12 05:14:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:14:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:14:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:14:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:14:35] 2.11.0.0 2490241 2941 104352 151613 1 188 2594983 4096001 6454 130560 0 14691550 99.997 239841 5418 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 05:14:35] CVMFS is ok
[2025-10-12 05:14:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:14:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 05:14:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 05:14:35] Further information can be found at the LHC@home message board.
[2025-10-12 05:14:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:14:35] Checking for apptainer binary...
[2025-10-12 05:14:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:14:35] Running /usr/bin/apptainer --version
[2025-10-12 05:14:35] apptainer version 1.4.3
[2025-10-12 05:14:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:14:35] x32-linux4
[2025-10-12 05:14:35] apptainer works
[2025-10-12 05:14:35] Set ATHENA_PROC_NUMBER=5
[2025-10-12 05:14:35] Set ATHENA_CORE_NUMBER=5
[2025-10-12 05:14:35] Starting ATLAS job with PandaID=6838182072
[2025-10-12 05:14:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:16:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:16:12] 2025-10-12 11:15:27,042 | INFO     | intersect: -51601965159.31512
[2025-10-12 07:16:12] 2025-10-12 11:15:27,042 | INFO     | chi2: 1.2428227408885868
[2025-10-12 07:16:12] 2025-10-12 11:15:27,042 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | sum of deviations: 14225149492.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | mean x: 1760263948.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | mean y: 2327498.469026549
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | -- intersect: -55967619016.82696
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | intersect: -55967619016.82696
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | chi2: 1.2443814618527027
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | current chi2=1.2443814618527027 (change=-0.1254178019788619 %)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,043 | INFO     | right removable region: 112
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | sum of deviations: 2247082314.9999995
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | mean x: 1760264253.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | mean y: 2359548.424778761
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | -- intersect: -8838960456.590933
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | intersect: -8838960456.590933
[2025-10-12 07:16:12] 2025-10-12 11:15:27,044 | INFO     | chi2: 0.000700540639943846
[2025-10-12 07:16:12] 2025-10-12 11:15:27,045 | INFO     | current chi2=0.000700540639943846 (change=99.94363310093256 %)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,050 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,050 | INFO     | sum of deviations: 1637411806.4999995
[2025-10-12 07:16:12] 2025-10-12 11:15:27,050 | INFO     | mean x: 1760264405.5
[2025-10-12 07:16:12] 2025-10-12 11:15:27,050 | INFO     | mean y: 2361179.9907407407
[2025-10-12 07:16:12] 2025-10-12 11:15:27,050 | INFO     | -- intersect: -7377078201.7100315
[2025-10-12 07:16:12] 2025-10-12 11:15:27,050 | INFO     | intersect: -7377078201.7100315
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | chi2: 0.0002614257198666305
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | current chi2=0.0002614257198666305 (change=62.68229065374624 %)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | sum of deviations: 1275230071.0000005
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | mean x: 1760264558.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | mean y: 2362241.669902913
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | -- intersect: -6623117497.474537
[2025-10-12 07:16:12] 2025-10-12 11:15:27,051 | INFO     | intersect: -6623117497.474537
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | chi2: 0.00015437178596589663
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | current chi2=0.00015437178596589663 (change=40.950038869683034 %)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | sum of deviations: 1051761969.4999999
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | mean x: 1760264710.5
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | mean y: 2362968.6224489794
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | -- intersect: -6341941500.949078
[2025-10-12 07:16:12] 2025-10-12 11:15:27,052 | INFO     | intersect: -6341941500.949078
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | chi2: 0.0001434016057618511
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | current chi2=0.0001434016057618511 (change=7.106337557349384 %)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | left removable region: 40
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | sum of deviations: 343274968.5
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | mean x: 1760265137.5
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | mean y: 2365451.263888889
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | -- intersect: -5219529062.155899
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | intersect: -5219529062.155899
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | chi2: 4.698175023019279e-05
[2025-10-12 07:16:12] 2025-10-12 11:15:27,053 | INFO     | -- intersect: -5219529062.155899
[2025-10-12 07:16:12] 2025-10-12 11:15:27,054 | INFO     | current memory leak: 2.97 B/s (using 72 data points, chi2=0.00)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | could have reported an average CPU frequency of 3830 MHz (7 samples)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | ..............................
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . Timing measurements:
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . get job = 0 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . initial setup = 2 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . payload setup = 10 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . stage-in = 0 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . payload execution = 7187 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . stage-out = 1 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | . log creation = 0 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,057 | INFO     | ..............................
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | 
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | job summary report
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | --------------------------------------------------
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | PanDA job id: 6838182072
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | task id: 46676269
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | errors: (none)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | pilot state: finished 
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | transexitcode: 0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | exeerrorcode: 0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | exeerrordiag: 
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | exitcode: 0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,535 | INFO     | exitmsg: OK
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | cpuconsumptiontime: 28721 s
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | nevents: 400
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | neventsw: 0
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | pid: 3567577
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | pgrp: 3567577
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | corecount: 5
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | event service: False
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | sizes: {0: 2348715, 1: 2348914, 9: 2349176, 12: 2349204, 7200: 2376448, 7201: 2376447, 7204: 2385699, 7213: 2385837}
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | --------------------------------------------------
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | 
[2025-10-12 07:16:12] 2025-10-12 11:15:27,536 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | job 6838182072 has completed (purged errors)
[2025-10-12 07:16:12] 2025-10-12 11:15:27,564 | INFO     | overall cleanup function is called
[2025-10-12 07:16:12] 2025-10-12 11:15:28,576 | INFO     | --- collectZombieJob: --- 10, [3567577]
[2025-10-12 07:16:12] 2025-10-12 11:15:28,576 | INFO     | zombie collector waiting for pid 3567577
[2025-10-12 07:16:12] 2025-10-12 11:15:28,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:16:12] 2025-10-12 11:15:28,576 | INFO     | collected zombie processes
[2025-10-12 07:16:12] 2025-10-12 11:15:28,576 | INFO     | will attempt to kill all subprocesses of pid=3567577
[2025-10-12 07:16:12] 2025-10-12 11:15:28,837 | INFO     | process IDs to be killed: [3567577] (in reverse order)
[2025-10-12 07:16:12] 2025-10-12 11:15:28,936 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:16:12] 2025-10-12 11:15:28,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:16:12] 2025-10-12 11:15:28,944 | INFO     | did not find any defunct processes belonging to 3567577
[2025-10-12 07:16:12] 2025-10-12 11:15:28,953 | INFO     | did not find any defunct processes belonging to 3567577
[2025-10-12 07:16:12] 2025-10-12 11:15:28,954 | INFO     | ready for new job
[2025-10-12 07:16:12] 2025-10-12 11:15:28,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:16:12] 2025-10-12 11:15:28,955 | INFO     | ***************************************
[2025-10-12 07:16:12] 2025-10-12 11:15:28,955 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:16:12] 2025-10-12 11:15:28,955 | INFO     | ***************************************
[2025-10-12 07:16:12] 2025-10-12 11:15:28,955 | INFO     | 
[2025-10-12 07:16:12] 2025-10-12 11:15:28,956 | INFO     | architecture information:
[2025-10-12 07:16:12] 2025-10-12 11:15:28,960 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:16:12] 2025-10-12 11:15:28,982 | INFO     | cat /etc/os-release:
[2025-10-12 07:16:12] NAME="CentOS Linux"
[2025-10-12 07:16:12] VERSION="7 (Core)"
[2025-10-12 07:16:12] ID="centos"
[2025-10-12 07:16:12] ID_LIKE="rhel fedora"
[2025-10-12 07:16:12] VERSION_ID="7"
[2025-10-12 07:16:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:16:12] ANSI_COLOR="0;31"
[2025-10-12 07:16:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:16:12] HOME_URL="https://www.centos.org/"
[2025-10-12 07:16:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:16:12] 
[2025-10-12 07:16:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:16:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:16:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:16:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:16:12] 
[2025-10-12 07:16:12] 2025-10-12 11:15:28,982 | INFO     | ***************************************
[2025-10-12 07:16:12] 2025-10-12 11:15:29,485 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-12 07:16:12] 2025-10-12 11:15:29,505 | INFO     | sufficient remaining disk space (148349386752 B)
[2025-10-12 07:16:12] 2025-10-12 11:15:29,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:16:12] 2025-10-12 11:15:29,505 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:16:12] 2025-10-12 11:15:29,505 | INFO     | update_server=False
[2025-10-12 07:16:12] 2025-10-12 11:15:29,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:16:12] 2025-10-12 11:15:29,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:16:12] 2025-10-12 11:15:29,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:16:12] 2025-10-12 11:15:30,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:16:12] 2025-10-12 11:15:30,457 | INFO     | aborting loop
[2025-10-12 07:16:12] 2025-10-12 11:15:30,510 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:30,543 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:30,553 | INFO     | all payload control threads have been joined
[2025-10-12 07:16:12] 2025-10-12 11:15:30,566 | INFO     | all data control threads have been joined
[2025-10-12 07:16:12] 2025-10-12 11:15:30,788 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:30,794 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:30,869 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,061 | INFO     | all job control threads have been joined
[2025-10-12 07:16:12] 2025-10-12 11:15:31,462 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,511 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,558 | INFO     | [payload] control thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,571 | INFO     | [data] control thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,589 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,808 | INFO     | [job] validate thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:31,891 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:32,066 | INFO     | [job] control thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:32,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:16:12] 2025-10-12 11:15:33,211 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:33,515 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:39,902 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:16:12] 2025-10-12 11:15:40,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:16:12] 2025-10-12 11:15:59,908 | INFO     | PID=3560923 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:16:12] 2025-10-12 11:15:59,908 | INFO     | .. there are 8 such processes running
[2025-10-12 07:16:12] 2025-10-12 11:15:59,908 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:16:12] 2025-10-12 11:15:59,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:16:12] 2025-10-12 11:15:59,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:16:12] 2025-10-12 11:16:05,485 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:16:12] 2025-10-12 11:16:07,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123185667086144)>', '<ExcThread(monitor, started 123184821036800)>']
[2025-10-12 07:16:12] 2025-10-12 11:16:07,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:16:12] 2025-10-12 11:16:07,953 | INFO     | [monitor] control thread has ended
[2025-10-12 07:16:12] 2025-10-12 11:16:12,152 | INFO     | all workflow threads have been joined
[2025-10-12 07:16:12] 2025-10-12 11:16:12,158 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:16:12] 2025-10-12 11:16:12,158 | INFO     | traces error code: 0
[2025-10-12 07:16:12] 2025-10-12 11:16:12,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:16:12] 2025-10-12 11:16:12,296 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:16:12] 2025-10-12 11:16:12,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:16:12] 2025-10-12 11:16:12,306 [wrapper] pilotpid: 3560923
[2025-10-12 07:16:12] 2025-10-12 11:16:12,312 [wrapper] Pilot exit status: 0
[2025-10-12 07:16:12] 2025-10-12 11:16:12,330 [wrapper] pandaids: 6838182072
[2025-10-12 07:16:12] 2025-10-12 11:16:12,405 [wrapper] cleanup supervisor_pilot 3765896 3560924
[2025-10-12 07:16:12] 2025-10-12 11:16:12,410 [wrapper] Test setup, not cleaning
[2025-10-12 07:16:12] 2025-10-12 11:16:12,417 [wrapper] apfmon messages muted
[2025-10-12 07:16:12] 2025-10-12 11:16:12,421 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:16:12] 2025-10-12 11:16:12,425 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:16:12]  *** Error codes and diagnostics ***
[2025-10-12 07:16:12]     "exeErrorCode": 0,
[2025-10-12 07:16:12]     "exeErrorDiag": "",
[2025-10-12 07:16:12]     "pilotErrorCode": 0,
[2025-10-12 07:16:12]     "pilotErrorDiag": "",
[2025-10-12 07:16:12]  *** Listing of results directory ***
[2025-10-12 07:16:12] total 414264
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc      5112 Oct 11 02:52 queuedata.json
[2025-10-12 07:16:12] -rwx------ 1 boinc boinc     36292 Oct 11 02:53 runpilot2-wrapper.sh
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc       100 Oct 12 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:16:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 05:14 run_atlas
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc       105 Oct 12 05:14 job.xml
[2025-10-12 07:16:12] -rw-r--r-- 2 boinc boinc 217727855 Oct 12 05:14 EVNT.46676267._002136.pool.root.1
[2025-10-12 07:16:12] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:14 start_atlas.sh
[2025-10-12 07:16:12] drwxrwx--x 2 boinc boinc      4096 Oct 12 05:14 shared
[2025-10-12 07:16:12] -rw-r--r-- 2 boinc boinc    569679 Oct 12 05:14 input.tar.gz
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc      9723 Oct 12 05:14 init_data.xml
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:14 boinc_setup_complete
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc         0 Oct 12 05:14 boinc_lockfile
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc      2547 Oct 12 05:14 pandaJob.out
[2025-10-12 07:16:12] -rw------- 1 boinc boinc    975520 Oct 12 05:14 agis_schedconf.cvmfs.json
[2025-10-12 07:16:12] -rw------- 1 boinc boinc   1560580 Oct 12 05:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:16:12] drwx------ 5 boinc boinc      4096 Oct 12 05:14 pilot3
[2025-10-12 07:16:12] -rw------- 1 boinc boinc 199860645 Oct 12 07:14 HITS.46676269._053198.pool.root.1
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc       529 Oct 12 07:14 boinc_task_state.xml
[2025-10-12 07:16:12] -rw------- 1 boinc boinc      1025 Oct 12 07:15 memory_monitor_summary.json
[2025-10-12 07:16:12] -rw------- 1 boinc boinc    303868 Oct 12 07:15 log.46676269._053198.job.log.tgz.1
[2025-10-12 07:16:12] -rw------- 1 boinc boinc      7736 Oct 12 07:15 heartbeat.json
[2025-10-12 07:16:12] -rw------- 1 boinc boinc        95 Oct 12 07:15 pilot_heartbeat.json
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc      8192 Oct 12 07:16 boinc_mmap_file
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc        27 Oct 12 07:16 wrapper_checkpoint.txt
[2025-10-12 07:16:12] -rw------- 1 boinc boinc      4903 Oct 12 07:16 pilotlog.txt
[2025-10-12 07:16:12] -rw------- 1 boinc boinc   1051035 Oct 12 07:16 log.46676269._053198.job.log.1
[2025-10-12 07:16:12] -rw------- 1 boinc boinc       357 Oct 12 07:16 output.list
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc       620 Oct 12 07:16 runtime_log
[2025-10-12 07:16:12] -rw------- 1 boinc boinc   1372160 Oct 12 07:16 result.tar.gz
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc      8764 Oct 12 07:16 runtime_log.err
[2025-10-12 07:16:12] -rw------- 1 boinc boinc       644 Oct 12 07:16 c5uLDmmeiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOhfNDmbrJbfm.diag
[2025-10-12 07:16:12] -rw-r--r-- 1 boinc boinc     20994 Oct 12 07:16 stderr.txt
[2025-10-12 07:16:12] HITS file was successfully produced:
[2025-10-12 07:16:12] -rw------- 1 boinc boinc 199860645 Oct 12 07:14 shared/HITS.pool.root.1
[2025-10-12 07:16:12]  *** Contents of shared directory: ***
[2025-10-12 07:16:12] total 409728
[2025-10-12 07:16:12] -rw-r--r-- 2 boinc boinc 217727855 Oct 12 05:14 ATLAS.root_0
[2025-10-12 07:16:12] -rw-r--r-- 2 boinc boinc     15120 Oct 12 05:14 start_atlas.sh
[2025-10-12 07:16:12] -rw-r--r-- 2 boinc boinc    569679 Oct 12 05:14 input.tar.gz
[2025-10-12 07:16:12] -rw------- 1 boinc boinc 199860645 Oct 12 07:14 HITS.pool.root.1
[2025-10-12 07:16:12] -rw------- 1 boinc boinc   1372160 Oct 12 07:16 result.tar.gz
07:16:14 (3557081): run_atlas exited; CPU time 28824.378691
07:16:14 (3557081): called boinc_finish(0)

</stderr_txt>
]]>

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