Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:25:54 (1422): wrapper (7.7.26015): starting
03:25:54 (1422): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 03:25:54] Arguments: --nthreads 8
[2025-10-12 03:25:54] Threads: 8
[2025-10-12 03:25:54] Checking for CVMFS
[2025-10-12 03:25:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:25:55] 2.11.2.0 2989 8199 73564 151612 0 57 11943896 20275201 1 130560 0 5117603 99.989 276380 36796 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:25:55] CVMFS is ok
[2025-10-12 03:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:25:55] Further information can be found at the LHC@home message board.
[2025-10-12 03:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:25:55] Checking for apptainer binary...
[2025-10-12 03:25:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:25:55] Running /usr/bin/apptainer --version
[2025-10-12 03:25:55] apptainer version 1.3.2-1.el7
[2025-10-12 03:25:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:25:56] c-204-24.aglt2.org
[2025-10-12 03:25:56] apptainer works
[2025-10-12 03:25:56] Set ATHENA_PROC_NUMBER=8
[2025-10-12 03:25:56] Set ATHENA_CORE_NUMBER=8
[2025-10-12 03:25:57] Starting ATLAS job with PandaID=6839316605
[2025-10-12 03:25:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:28:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:28:31] 2025-10-12 09:27:53,972 | INFO     | PID=5278 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 05:28:31] 2025-10-12 09:27:54,173 | INFO     | monitor loop #541: job 0:6839316605 is in state 'finished'
[2025-10-12 05:28:31] 2025-10-12 09:27:54,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:28:31] 2025-10-12 09:27:54,972 | INFO     | time since job start (7300s) is within the limit (172800.0s)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,849 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 05:28:31] 2025-10-12 09:27:55,852 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-10-12 05:28:31] 2025-10-12 09:27:55,854 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839316605/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,855 | INFO     | extracted standard info from prmon json
[2025-10-12 05:28:31] 2025-10-12 09:27:55,855 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:28:31] 2025-10-12 09:27:55,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:28:31] 2025-10-12 09:27:55,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:28:31] 2025-10-12 09:27:55,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:28:31] 2025-10-12 09:27:55,859 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:28:31] 2025-10-12 09:27:55,860 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,861 | INFO     | sum of deviations: -6591257827.000011
[2025-10-12 05:28:31] 2025-10-12 09:27:55,861 | INFO     | mean x: 1760257604.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,861 | INFO     | mean y: 2595467.487394958
[2025-10-12 05:28:31] 2025-10-12 09:27:55,861 | INFO     | -- intersect: 22207856885.79187
[2025-10-12 05:28:31] 2025-10-12 09:27:55,861 | INFO     | intersect: 22207856885.79187
[2025-10-12 05:28:31] 2025-10-12 09:27:55,861 | INFO     | chi2: 1.6074051470804427
[2025-10-12 05:28:31] 2025-10-12 09:27:55,862 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 05:28:31] 2025-10-12 09:27:55,862 | INFO     | sum of deviations: -5402681946.5
[2025-10-12 05:28:31] 2025-10-12 09:27:55,862 | INFO     | mean x: 1760257451.5
[2025-10-12 05:28:31] 2025-10-12 09:27:55,862 | INFO     | mean y: 2598340.1140350876
[2025-10-12 05:28:31] 2025-10-12 09:27:55,863 | INFO     | -- intersect: 20705252815.333485
[2025-10-12 05:28:31] 2025-10-12 09:27:55,863 | INFO     | intersect: 20705252815.333485
[2025-10-12 05:28:31] 2025-10-12 09:27:55,863 | INFO     | chi2: 1.609117552483376
[2025-10-12 05:28:31] 2025-10-12 09:27:55,863 | INFO     | current chi2=1.609117552483376 (change=-0.10653228316729309 %)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,863 | INFO     | right removable region: 113
[2025-10-12 05:28:31] 2025-10-12 09:27:55,864 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 05:28:31] 2025-10-12 09:27:55,864 | INFO     | sum of deviations: -25197591531.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,864 | INFO     | mean x: 1760257756.5
[2025-10-12 05:28:31] 2025-10-12 09:27:55,864 | INFO     | mean y: 2639582.8596491227
[2025-10-12 05:28:31] 2025-10-12 09:27:55,864 | INFO     | -- intersect: 96557855423.30396
[2025-10-12 05:28:31] 2025-10-12 09:27:55,865 | INFO     | intersect: 96557855423.30396
[2025-10-12 05:28:31] 2025-10-12 09:27:55,865 | INFO     | chi2: 0.09994290820885092
[2025-10-12 05:28:31] 2025-10-12 09:27:55,865 | INFO     | current chi2=0.09994290820885092 (change=93.78234489354604 %)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,865 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,866 | INFO     | sum of deviations: -23417880480.000008
[2025-10-12 05:28:31] 2025-10-12 09:27:55,866 | INFO     | mean x: 1760257909.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,866 | INFO     | mean y: 2634866.3853211007
[2025-10-12 05:28:31] 2025-10-12 09:27:55,866 | INFO     | -- intersect: 102662934354.35713
[2025-10-12 05:28:31] 2025-10-12 09:27:55,866 | INFO     | intersect: 102662934354.35713
[2025-10-12 05:28:31] 2025-10-12 09:27:55,866 | INFO     | chi2: 0.09494328452158014
[2025-10-12 05:28:31] 2025-10-12 09:27:55,867 | INFO     | current chi2=0.09494328452158014 (change=5.002479692529111 %)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,867 | INFO     | left removable region: 20
[2025-10-12 05:28:31] 2025-10-12 09:27:55,867 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,867 | INFO     | sum of deviations: -16710132111.999998
[2025-10-12 05:28:31] 2025-10-12 09:27:55,867 | INFO     | mean x: 1760258031.0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,868 | INFO     | mean y: 2625130.4516129033
[2025-10-12 05:28:31] 2025-10-12 09:27:55,868 | INFO     | -- intersect: 117947524567.13531
[2025-10-12 05:28:31] 2025-10-12 09:27:55,868 | INFO     | intersect: 117947524567.13531
[2025-10-12 05:28:31] 2025-10-12 09:27:55,868 | INFO     | chi2: 0.0859823436302843
[2025-10-12 05:28:31] 2025-10-12 09:27:55,868 | INFO     | -- intersect: 117947524567.13531
[2025-10-12 05:28:31] 2025-10-12 09:27:55,868 | INFO     | current memory leak: -67.00 B/s (using 93 data points, chi2=0.09)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | ..............................
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | . Timing measurements:
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | . get job = 0 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | . initial setup = 2 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | . payload setup = 8 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,869 | INFO     | . stage-in = 0 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,870 | INFO     | . payload execution = 7262 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,870 | INFO     | . stage-out = 1 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,870 | INFO     | . log creation = 0 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,870 | INFO     | ..............................
[2025-10-12 05:28:31] 2025-10-12 09:27:55,962 | INFO     | 
[2025-10-12 05:28:31] 2025-10-12 09:27:55,963 | INFO     | job summary report
[2025-10-12 05:28:31] 2025-10-12 09:27:55,963 | INFO     | --------------------------------------------------
[2025-10-12 05:28:31] 2025-10-12 09:27:55,963 | INFO     | PanDA job id: 6839316605
[2025-10-12 05:28:31] 2025-10-12 09:27:55,963 | INFO     | task id: 46676269
[2025-10-12 05:28:31] 2025-10-12 09:27:55,963 | INFO     | errors: (none)
[2025-10-12 05:28:31] 2025-10-12 09:27:55,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:28:31] 2025-10-12 09:27:55,964 | INFO     | pilot state: finished 
[2025-10-12 05:28:31] 2025-10-12 09:27:55,964 | INFO     | transexitcode: 0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,964 | INFO     | exeerrorcode: 0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,964 | INFO     | exeerrordiag: 
[2025-10-12 05:28:31] 2025-10-12 09:27:55,964 | INFO     | exitcode: 0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,965 | INFO     | exitmsg: OK
[2025-10-12 05:28:31] 2025-10-12 09:27:55,965 | INFO     | cpuconsumptiontime: 53766 s
[2025-10-12 05:28:31] 2025-10-12 09:27:55,965 | INFO     | nevents: 400
[2025-10-12 05:28:31] 2025-10-12 09:27:55,965 | INFO     | neventsw: 0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,965 | INFO     | pid: 11708
[2025-10-12 05:28:31] 2025-10-12 09:27:55,966 | INFO     | pgrp: 11708
[2025-10-12 05:28:31] 2025-10-12 09:27:55,966 | INFO     | corecount: 8
[2025-10-12 05:28:31] 2025-10-12 09:27:55,966 | INFO     | event service: False
[2025-10-12 05:28:31] 2025-10-12 09:27:55,966 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7274: 2376457, 7275: 2385455, 7278: 2385511, 7284: 2385833}
[2025-10-12 05:28:31] 2025-10-12 09:27:55,966 | INFO     | --------------------------------------------------
[2025-10-12 05:28:31] 2025-10-12 09:27:55,966 | INFO     | 
[2025-10-12 05:28:31] 2025-10-12 09:27:55,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:28:31] 2025-10-12 09:27:55,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:55,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,001 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:28:31] 2025-10-12 09:27:56,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:28:31] 2025-10-12 09:27:56,001 | INFO     | job 6839316605 has completed (purged errors)
[2025-10-12 05:28:31] 2025-10-12 09:27:56,002 | INFO     | overall cleanup function is called
[2025-10-12 05:28:31] 2025-10-12 09:27:57,010 | INFO     | --- collectZombieJob: --- 10, [11708]
[2025-10-12 05:28:31] 2025-10-12 09:27:57,010 | INFO     | zombie collector waiting for pid 11708
[2025-10-12 05:28:31] 2025-10-12 09:27:57,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:28:31] 2025-10-12 09:27:57,022 | INFO     | collected zombie processes
[2025-10-12 05:28:31] 2025-10-12 09:27:57,022 | INFO     | will attempt to kill all subprocesses of pid=11708
[2025-10-12 05:28:31] 2025-10-12 09:27:57,113 | INFO     | process IDs to be killed: [11708] (in reverse order)
[2025-10-12 05:28:31] 2025-10-12 09:27:57,173 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:28:31] 2025-10-12 09:27:57,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:28:31] 2025-10-12 09:27:57,178 | INFO     | did not find any defunct processes belonging to 11708
[2025-10-12 05:28:31] 2025-10-12 09:27:57,182 | INFO     | did not find any defunct processes belonging to 11708
[2025-10-12 05:28:31] 2025-10-12 09:27:57,182 | INFO     | ready for new job
[2025-10-12 05:28:31] 2025-10-12 09:27:57,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:28:31] 2025-10-12 09:27:57,184 | INFO     | ***************************************
[2025-10-12 05:28:31] 2025-10-12 09:27:57,184 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:28:31] 2025-10-12 09:27:57,184 | INFO     | ***************************************
[2025-10-12 05:28:31] 2025-10-12 09:27:57,184 | INFO     | 
[2025-10-12 05:28:31] 2025-10-12 09:27:57,185 | INFO     | architecture information:
[2025-10-12 05:28:31] 2025-10-12 09:27:57,185 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:28:31] 2025-10-12 09:27:57,204 | INFO     | cat /etc/os-release:
[2025-10-12 05:28:31] NAME="CentOS Linux"
[2025-10-12 05:28:31] VERSION="7 (Core)"
[2025-10-12 05:28:31] ID="centos"
[2025-10-12 05:28:31] ID_LIKE="rhel fedora"
[2025-10-12 05:28:31] VERSION_ID="7"
[2025-10-12 05:28:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:28:31] ANSI_COLOR="0;31"
[2025-10-12 05:28:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:28:31] HOME_URL="https://www.centos.org/"
[2025-10-12 05:28:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:28:31] 
[2025-10-12 05:28:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:28:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:28:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:28:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:28:31] 
[2025-10-12 05:28:31] 2025-10-12 09:27:57,204 | INFO     | ***************************************
[2025-10-12 05:28:31] 2025-10-12 09:27:57,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:28:31] 2025-10-12 09:27:57,728 | INFO     | sufficient remaining disk space (18704498688 B)
[2025-10-12 05:28:31] 2025-10-12 09:27:57,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:28:31] 2025-10-12 09:27:57,729 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:28:31] 2025-10-12 09:27:57,729 | INFO     | update_server=False
[2025-10-12 05:28:31] 2025-10-12 09:27:57,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:28:31] 2025-10-12 09:27:57,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:28:31] 2025-10-12 09:27:57,730 | INFO     | aborting loop
[2025-10-12 05:28:31] 2025-10-12 09:27:57,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:28:31] 2025-10-12 09:27:57,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:28:31] 2025-10-12 09:27:58,400 | INFO     | all job control threads have been joined
[2025-10-12 05:28:31] 2025-10-12 09:27:58,529 | INFO     | all data control threads have been joined
[2025-10-12 05:28:31] 2025-10-12 09:27:58,732 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:58,735 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:58,735 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:58,851 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:58,991 | INFO     | all payload control threads have been joined
[2025-10-12 05:28:31] 2025-10-12 09:27:59,406 | INFO     | [job] control thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,471 | INFO     | [job] validate thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,534 | INFO     | [data] control thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,626 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,684 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,736 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,749 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,757 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:27:59,997 | INFO     | [payload] control thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:28:00,198 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:28:00,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:28:31] 2025-10-12 09:28:04,669 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:28:31] 2025-10-12 09:28:25,796 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:28:31] 2025-10-12 09:28:26,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339050211136)>', '<ExcThread(monitor, started 140337720850176)>']
[2025-10-12 05:28:31] 2025-10-12 09:28:28,193 | INFO     | PID=5278 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 05:28:31] 2025-10-12 09:28:28,194 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:28:31] 2025-10-12 09:28:28,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:28:31] 2025-10-12 09:28:28,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:28:31] 2025-10-12 09:28:28,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:28:31] 2025-10-12 09:28:28,194 | INFO     | [monitor] control thread has ended
[2025-10-12 05:28:31] 2025-10-12 09:28:31,626 | INFO     | all workflow threads have been joined
[2025-10-12 05:28:31] 2025-10-12 09:28:31,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:28:31] 2025-10-12 09:28:31,627 | INFO     | traces error code: 0
[2025-10-12 05:28:31] 2025-10-12 09:28:31,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:28:31] 2025-10-12 09:28:31,740 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:28:31] 2025-10-12 09:28:31,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:28:31] 2025-10-12 09:28:31,750 [wrapper] pilotpid: 5278
[2025-10-12 05:28:31] 2025-10-12 09:28:31,755 [wrapper] Pilot exit status: 0
[2025-10-12 05:28:31] 2025-10-12 09:28:31,774 [wrapper] pandaids: 6839316605
[2025-10-12 05:28:31] 2025-10-12 09:28:31,820 [wrapper] cleanup supervisor_pilot  8904 5279
[2025-10-12 05:28:31] 2025-10-12 09:28:31,824 [wrapper] Test setup, not cleaning
[2025-10-12 05:28:31] 2025-10-12 09:28:31,829 [wrapper] apfmon messages muted
[2025-10-12 05:28:31] 2025-10-12 09:28:31,834 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:28:31] 2025-10-12 09:28:31,838 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:28:31]  *** Error codes and diagnostics ***
[2025-10-12 05:28:31]     "exeErrorCode": 0,
[2025-10-12 05:28:31]     "exeErrorDiag": "",
[2025-10-12 05:28:31]     "pilotErrorCode": 0,
[2025-10-12 05:28:31]     "pilotErrorDiag": "",
[2025-10-12 05:28:31]  *** Listing of results directory ***
[2025-10-12 05:28:31] total 415540
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:22 queuedata.json
[2025-10-12 05:28:31] -rwx------ 1 boincer umatlas     36292 Oct 11 22:22 runpilot2-wrapper.sh
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:28:31] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:25 run_atlas
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:25 job.xml
[2025-10-12 05:28:31] -rw-r--r-- 2 boincer umatlas 223087723 Oct 12 03:25 EVNT.46676267._003179.pool.root.1
[2025-10-12 05:28:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:25 start_atlas.sh
[2025-10-12 05:28:31] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:25 shared
[2025-10-12 05:28:31] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 03:25 input.tar.gz
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:25 boinc_lockfile
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 03:25 pandaJob.out
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas    975520 Oct 12 03:26 agis_schedconf.cvmfs.json
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas   1560580 Oct 12 03:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:28:31] drwx------ 5 boincer umatlas      4096 Oct 12 03:26 pilot3
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 05:19 init_data.xml
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas 195735456 Oct 12 05:27 HITS.46676269._069275.pool.root.1
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas       529 Oct 12 05:27 boinc_task_state.xml
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas      1050 Oct 12 05:27 memory_monitor_summary.json
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas    371157 Oct 12 05:27 log.46676269._069275.job.log.tgz.1
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas      7848 Oct 12 05:27 heartbeat.json
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:28 boinc_mmap_file
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:28 wrapper_checkpoint.txt
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas        95 Oct 12 05:28 pilot_heartbeat.json
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas      4745 Oct 12 05:28 pilotlog.txt
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas   1026689 Oct 12 05:28 log.46676269._069275.job.log.1
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas       357 Oct 12 05:28 output.list
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:28 runtime_log
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas   1413120 Oct 12 05:28 result.tar.gz
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 05:28 runtime_log.err
[2025-10-12 05:28:31] -rw------- 1 boincer umatlas       658 Oct 12 05:28 5g2LDm6t0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqKiNDmwoegQm.diag
[2025-10-12 05:28:31] -rw-r--r-- 1 boincer umatlas     21191 Oct 12 05:28 stderr.txt
[2025-10-12 05:28:32] HITS file was successfully produced:
[2025-10-12 05:28:32] -rw------- 1 boincer umatlas 195735456 Oct 12 05:27 shared/HITS.pool.root.1
[2025-10-12 05:28:32]  *** Contents of shared directory: ***
[2025-10-12 05:28:32] total 410968
[2025-10-12 05:28:32] -rw-r--r-- 2 boincer umatlas 223087723 Oct 12 03:25 ATLAS.root_0
[2025-10-12 05:28:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:25 start_atlas.sh
[2025-10-12 05:28:32] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 03:25 input.tar.gz
[2025-10-12 05:28:32] -rw------- 1 boincer umatlas 195735456 Oct 12 05:27 HITS.pool.root.1
[2025-10-12 05:28:32] -rw------- 1 boincer umatlas   1413120 Oct 12 05:28 result.tar.gz
05:28:33 (1422): run_atlas exited; CPU time 53785.704930
05:28:33 (1422): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN