Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
12:11:53 (1706476): wrapper (7.7.26015): starting
12:11:53 (1706476): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:11:53] Arguments: --nthreads 12
[2025-10-12 12:11:53] Threads: 12
[2025-10-12 12:11:53] Checking for CVMFS
[2025-10-12 12:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:11:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:11:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:11:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:11:53] 2.13.2.0 4637 1464 50056 151617 3 57 2961283 4096000 917 130560 0 4774061 99.997 55085 413 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 12:11:53] CVMFS is ok
[2025-10-12 12:11:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:11:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 12:11:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 12:11:53] Further information can be found at the LHC@home message board.
[2025-10-12 12:11:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:11:53] Checking for apptainer binary...
[2025-10-12 12:11:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:11:53] Running /usr/bin/apptainer --version
[2025-10-12 12:11:53] apptainer version 1.4.3
[2025-10-12 12:11:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:11:53] JM4
[2025-10-12 12:11:53] apptainer works
[2025-10-12 12:11:53] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:11:53] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:11:53] Starting ATLAS job with PandaID=6830520676
[2025-10-12 12:11:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:45:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:45:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 12:45:09]  replicas=None
[2025-10-12 12:45:09]  scope=mc23_13p6TeV
[2025-10-12 12:45:09]  status=None
[2025-10-12 12:45:09]  status_code=0
[2025-10-12 12:45:09]  storage_token=
[2025-10-12 12:45:09]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6830520676/log.46376905._069903.job.log.tgz.1
[2025-10-12 12:45:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/b3/log.46376905._069903.job.log.tgz.1
[2025-10-12 12:45:09]  workdir=None
[2025-10-12 12:45:09] ]
[2025-10-12 12:45:09] 2025-10-12 10:44:14,063 | INFO     | transferring file log.46376905._069903.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6830520676/log.46376905._069903.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 12:45:09] 2025-10-12 10:44:14,063 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6830520676/log.46376905._069903.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.463769
[2025-10-12 12:45:09] 2025-10-12 10:44:14,077 | INFO     | adding to output.list: log.46376905._069903.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/b3/log.46376905._069903.job.log.tg
[2025-10-12 12:45:09] 2025-10-12 10:44:14,077 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:45:09] 2025-10-12 10:44:14,077 | INFO     | summary of transferred files:
[2025-10-12 12:45:09] 2025-10-12 10:44:14,077 | INFO     |  -- lfn=log.46376905._069903.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:45:09] 2025-10-12 10:44:14,077 | INFO     | stage-out finished correctly
[2025-10-12 12:45:09] 2025-10-12 10:44:14,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:45:09] 2025-10-12 10:44:14,491 | INFO     | job 6830520676 has state=finished
[2025-10-12 12:45:09] 2025-10-12 10:44:14,491 | INFO     | preparing for final server update for job 6830520676 in state='finished'
[2025-10-12 12:45:09] 2025-10-12 10:44:14,491 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:45:09] 2025-10-12 10:44:14,491 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:45:09] 2025-10-12 10:44:14,492 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:45:09] 2025-10-12 10:44:14,492 | INFO     | job 6830520676 has finished - writing final server update
[2025-10-12 12:45:09] 2025-10-12 10:44:14,492 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:45:09] 2025-10-12 10:44:14,493 | INFO     | executing command: lscpu
[2025-10-12 12:45:09] 2025-10-12 10:44:14,516 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:45:09] 2025-10-12 10:44:14,978 | INFO     | PID=1710288 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:45:09] 2025-10-12 10:44:14,978 | INFO     | .. there are 2 such processes running
[2025-10-12 12:45:09] 2025-10-12 10:44:15,978 | INFO     | time since job start (1935s) is within the limit (172800.0s)
[2025-10-12 12:45:09] 2025-10-12 10:44:16,988 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:45:09] 2025-10-12 10:44:16,991 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3772.22675
[2025-10-12 12:45:09] 2025-10-12 10:44:16,994 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6830520676/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:45:09] 2025-10-12 10:44:16,995 | INFO     | extracted standard info from prmon json
[2025-10-12 12:45:09] 2025-10-12 10:44:16,995 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:45:09] 2025-10-12 10:44:16,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:45:09] 2025-10-12 10:44:16,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:45:09] 2025-10-12 10:44:16,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | sum of square deviations: 4837300.0
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | sum of deviations: -61244305.00000001
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | mean x: 1760264978.0
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | mean y: 3083245.96
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | -- intersect: 22289525102.667316
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | intersect: 22289525102.667316
[2025-10-12 12:45:09] 2025-10-12 10:44:16,996 | INFO     | chi2: 0.003839752043490771
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | -- intersect: 22289525102.667316
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | current memory leak: -12.66 B/s (using 25 data points, chi2=0.00)
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | could have reported an average CPU frequency of 3914 MHz (5 samples)
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | ..............................
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . Timing measurements:
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . get job = 0 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . initial setup = 1 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . payload setup = 3 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . stage-in = 0 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . payload execution = 1911 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . stage-out = 0 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | . log creation = 0 s
[2025-10-12 12:45:09] 2025-10-12 10:44:16,997 | INFO     | ..............................
[2025-10-12 12:45:09] 2025-10-12 10:44:17,151 | WARNING  | process 1716858 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:45:09] 2025-10-12 10:44:17,151 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6830520676/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:45:09] 2025-10-12 10:44:17,236 | INFO     | number of running child processes to parent process 1716858: 1
[2025-10-12 12:45:09] 2025-10-12 10:44:17,236 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:45:09] 2025-10-12 10:44:17,236 | INFO     | aborting job monitoring since job object (job id=6830520676) has expired
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | 
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | job summary report
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | --------------------------------------------------
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | PanDA job id: 6830520676
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | task id: 46376905
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | errors: (none)
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | pilot state: finished 
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | transexitcode: 0
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | exeerrorcode: 0
[2025-10-12 12:45:09] 2025-10-12 10:44:17,359 | INFO     | exeerrordiag: 
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | exitcode: 0
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | exitmsg: OK
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | cpuconsumptiontime: 20699 s
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | nevents: 400
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | neventsw: 0
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | pid: 1716858
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | pgrp: 1716858
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | corecount: 12
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | event service: False
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | sizes: {0: 2348823, 2: 2349085, 11: 2349113, 1918: 2374066, 1920: 2383134, 1923: 2383304}
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | --------------------------------------------------
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | 
[2025-10-12 12:45:09] 2025-10-12 10:44:17,360 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-12 12:45:09] 2025-10-12 10:44:17,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:45:09] 2025-10-12 10:44:17,377 | INFO     | job 6830520676 has completed (purged errors)
[2025-10-12 12:45:09] 2025-10-12 10:44:17,377 | INFO     | overall cleanup function is called
[2025-10-12 12:45:09] 2025-10-12 10:44:18,384 | INFO     | --- collectZombieJob: --- 10, [1716858]
[2025-10-12 12:45:09] 2025-10-12 10:44:18,384 | INFO     | zombie collector waiting for pid 1716858
[2025-10-12 12:45:09] 2025-10-12 10:44:18,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:45:09] 2025-10-12 10:44:18,384 | INFO     | collected zombie processes
[2025-10-12 12:45:09] 2025-10-12 10:44:18,384 | INFO     | will attempt to kill all subprocesses of pid=1716858
[2025-10-12 12:45:09] 2025-10-12 10:44:18,476 | INFO     | process IDs to be killed: [1716858] (in reverse order)
[2025-10-12 12:45:09] 2025-10-12 10:44:18,514 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:45:09] 2025-10-12 10:44:18,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:45:09] 2025-10-12 10:44:18,516 | INFO     | did not find any defunct processes belonging to 1716858
[2025-10-12 12:45:09] 2025-10-12 10:44:18,519 | INFO     | did not find any defunct processes belonging to 1716858
[2025-10-12 12:45:09] 2025-10-12 10:44:18,519 | INFO     | ready for new job
[2025-10-12 12:45:09] 2025-10-12 10:44:18,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:45:09] 2025-10-12 10:44:18,520 | INFO     | ***************************************
[2025-10-12 12:45:09] 2025-10-12 10:44:18,520 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 12:45:09] 2025-10-12 10:44:18,520 | INFO     | ***************************************
[2025-10-12 12:45:09] 2025-10-12 10:44:18,520 | INFO     | 
[2025-10-12 12:45:09] 2025-10-12 10:44:18,521 | INFO     | architecture information:
[2025-10-12 12:45:09] 2025-10-12 10:44:18,521 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:45:09] 2025-10-12 10:44:18,532 | INFO     | cat /etc/os-release:
[2025-10-12 12:45:09] NAME="CentOS Linux"
[2025-10-12 12:45:09] VERSION="7 (Core)"
[2025-10-12 12:45:09] ID="centos"
[2025-10-12 12:45:09] ID_LIKE="rhel fedora"
[2025-10-12 12:45:09] VERSION_ID="7"
[2025-10-12 12:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:45:09] ANSI_COLOR="0;31"
[2025-10-12 12:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:45:09] HOME_URL="https://www.centos.org/"
[2025-10-12 12:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:45:09] 
[2025-10-12 12:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:45:09] 
[2025-10-12 12:45:09] 2025-10-12 10:44:18,533 | INFO     | ***************************************
[2025-10-12 12:45:09] 2025-10-12 10:44:19,035 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-12 12:45:09] 2025-10-12 10:44:19,047 | INFO     | sufficient remaining disk space (72496447488 B)
[2025-10-12 12:45:09] 2025-10-12 10:44:19,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:45:09] 2025-10-12 10:44:19,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:45:09] 2025-10-12 10:44:19,047 | INFO     | update_server=False
[2025-10-12 12:45:09] 2025-10-12 10:44:19,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:45:09] 2025-10-12 10:44:19,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:45:09] 2025-10-12 10:44:19,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:45:09] 2025-10-12 10:44:19,048 | INFO     | aborting loop
[2025-10-12 12:45:09] 2025-10-12 10:44:19,116 | INFO     | all job control threads have been joined
[2025-10-12 12:45:09] 2025-10-12 10:44:19,578 | INFO     | all data control threads have been joined
[2025-10-12 12:45:09] 2025-10-12 10:44:19,590 | INFO     | all payload control threads have been joined
[2025-10-12 12:45:09] 2025-10-12 10:44:19,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:45:09] 2025-10-12 10:44:20,053 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,053 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,053 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,094 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,114 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,121 | INFO     | [job] control thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,229 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:45:09] 2025-10-12 10:44:20,584 | INFO     | [data] control thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,595 | INFO     | [payload] control thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:20,965 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:21,124 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:21,220 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:21,454 | INFO     | [job] validate thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:21,647 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:24,501 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:29,506 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:45:09] 2025-10-12 10:44:30,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:45:09] 2025-10-12 10:44:49,162 | INFO     | PID=1710288 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:45:09] 2025-10-12 10:44:49,162 | INFO     | .. there are 2 such processes running
[2025-10-12 12:45:09] 2025-10-12 10:44:49,163 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:45:09] 2025-10-12 10:44:49,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:45:09] 2025-10-12 10:44:49,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:45:09] 2025-10-12 10:45:03,537 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:45:09] 2025-10-12 10:45:04,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352988239680)>', '<ExcThread(monitor, started 140352266688256)>']
[2025-10-12 12:45:09] 2025-10-12 10:45:04,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:45:09] 2025-10-12 10:45:04,237 | INFO     | [monitor] control thread has ended
[2025-10-12 12:45:09] 2025-10-12 10:45:09,195 | INFO     | all workflow threads have been joined
[2025-10-12 12:45:09] 2025-10-12 10:45:09,196 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:45:09] 2025-10-12 10:45:09,196 | INFO     | traces error code: 0
[2025-10-12 12:45:09] 2025-10-12 10:45:09,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:45:09] 2025-10-12 10:45:09,257 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:45:09] 2025-10-12 10:45:09,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:45:09] 2025-10-12 10:45:09,261 [wrapper] pilotpid: 1710288
[2025-10-12 12:45:09] 2025-10-12 10:45:09,263 [wrapper] Pilot exit status: 0
[2025-10-12 12:45:09] 2025-10-12 10:45:09,270 [wrapper] pandaids: 6830520676
[2025-10-12 12:45:09] 2025-10-12 10:45:09,296 [wrapper] cleanup supervisor_pilot 1746223 1710289
[2025-10-12 12:45:09] 2025-10-12 10:45:09,298 [wrapper] Test setup, not cleaning
[2025-10-12 12:45:09] 2025-10-12 10:45:09,300 [wrapper] apfmon messages muted
[2025-10-12 12:45:09] 2025-10-12 10:45:09,301 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:45:09] 2025-10-12 10:45:09,303 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:45:09]  *** Error codes and diagnostics ***
[2025-10-12 12:45:09]     "exeErrorCode": 0,
[2025-10-12 12:45:09]     "exeErrorDiag": "",
[2025-10-12 12:45:09]     "pilotErrorCode": 0,
[2025-10-12 12:45:09]     "pilotErrorDiag": "",
[2025-10-12 12:45:09]  *** Listing of results directory ***
[2025-10-12 12:45:09] total 391716
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc    552446 oct  5 00:48 pilot3.tar.gz
[2025-10-12 12:45:09] -rwx------ 1 boinc boinc     36292 oct  5 00:58 runpilot2-wrapper.sh
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc      5112 oct  5 00:58 queuedata.json
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc       100 oct 12 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:45:09] -rwxr-xr-x 1 boinc boinc      7986 oct 12 12:11 run_atlas
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc       105 oct 12 12:11 job.xml
[2025-10-12 12:45:09] -rw-r--r-- 2 boinc boinc 214743268 oct 12 12:11 EVNT.46376901._002536.pool.root.1
[2025-10-12 12:45:09] -rw-r--r-- 2 boinc boinc     15120 oct 12 12:11 start_atlas.sh
[2025-10-12 12:45:09] drwxrwx--x 1 boinc boinc        76 oct 12 12:11 shared
[2025-10-12 12:45:09] -rw-r--r-- 2 boinc boinc    565597 oct 12 12:11 input.tar.gz
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc      9255 oct 12 12:11 init_data.xml
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc         0 oct 12 12:11 boinc_setup_complete
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc         0 oct 12 12:11 boinc_lockfile
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc      2519 oct 12 12:11 pandaJob.out
[2025-10-12 12:45:09] -rw------- 1 boinc boinc    975520 oct 12 12:11 agis_schedconf.cvmfs.json
[2025-10-12 12:45:09] -rw------- 1 boinc boinc   1560580 oct 12 12:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:45:09] drwx------ 1 boinc boinc       368 oct 12 12:12 pilot3
[2025-10-12 12:45:09] -rw------- 1 boinc boinc 181166346 oct 12 12:43 HITS.46376905._069903.pool.root.1
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc       529 oct 12 12:44 boinc_task_state.xml
[2025-10-12 12:45:09] -rw------- 1 boinc boinc      1021 oct 12 12:44 memory_monitor_summary.json
[2025-10-12 12:45:09] -rw------- 1 boinc boinc    339832 oct 12 12:44 log.46376905._069903.job.log.tgz.1
[2025-10-12 12:45:09] -rw------- 1 boinc boinc      7729 oct 12 12:44 heartbeat.json
[2025-10-12 12:45:09] -rw------- 1 boinc boinc        95 oct 12 12:44 pilot_heartbeat.json
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc      8192 oct 12 12:45 boinc_mmap_file
[2025-10-12 12:45:09] -rw------- 1 boinc boinc      4902 oct 12 12:45 pilotlog.txt
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc        27 oct 12 12:45 wrapper_checkpoint.txt
[2025-10-12 12:45:09] -rw------- 1 boinc boinc    322883 oct 12 12:45 log.46376905._069903.job.log.1
[2025-10-12 12:45:09] -rw------- 1 boinc boinc       357 oct 12 12:45 output.list
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc       620 oct 12 12:45 runtime_log
[2025-10-12 12:45:09] -rw------- 1 boinc boinc    686080 oct 12 12:45 result.tar.gz
[2025-10-12 12:45:09] -rw------- 1 boinc boinc       636 oct 12 12:45 RztMDmSOQP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRhEMDmOGUwSm.diag
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc      8731 oct 12 12:45 runtime_log.err
[2025-10-12 12:45:09] -rw-r--r-- 1 boinc boinc     21989 oct 12 12:45 stderr.txt
[2025-10-12 12:45:09] HITS file was successfully produced:
[2025-10-12 12:45:09] -rw------- 1 boinc boinc 181166346 oct 12 12:43 shared/HITS.pool.root.1
[2025-10-12 12:45:09]  *** Contents of shared directory: ***
[2025-10-12 12:45:09] total 387880
[2025-10-12 12:45:09] -rw-r--r-- 2 boinc boinc 214743268 oct 12 12:11 ATLAS.root_0
[2025-10-12 12:45:09] -rw-r--r-- 2 boinc boinc     15120 oct 12 12:11 start_atlas.sh
[2025-10-12 12:45:09] -rw-r--r-- 2 boinc boinc    565597 oct 12 12:11 input.tar.gz
[2025-10-12 12:45:09] -rw------- 1 boinc boinc 181166346 oct 12 12:43 HITS.pool.root.1
[2025-10-12 12:45:09] -rw------- 1 boinc boinc    686080 oct 12 12:45 result.tar.gz
12:45:11 (1706476): run_atlas exited; CPU time 20701.220240
12:45:11 (1706476): called boinc_finish(0)

</stderr_txt>
]]>

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