Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:15:11 (3358989): wrapper (7.7.26015): starting
05:15:11 (3358989): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 05:15:11] Arguments: --nthreads 9
[2025-10-12 05:15:11] Threads: 9
[2025-10-12 05:15:11] Checking for CVMFS
[2025-10-12 05:15:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:15:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:15:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:15:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:15:34] 2.13.2.0 6179 5487 120076 151613 1 65 37445021 40960001 20729 16776704 0 14508761 99.942 1615097 31081 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:15:34] CVMFS is ok
[2025-10-12 05:15:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:15:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:15:34] Further information can be found at the LHC@home message board.
[2025-10-12 05:15:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:15:34] Checking for apptainer binary...
[2025-10-12 05:15:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:15:34] Running /usr/bin/apptainer --version
[2025-10-12 05:15:34] apptainer version 1.4.3-1.el9
[2025-10-12 05:15:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:15:35] c-211-33-2.aglt2.org
[2025-10-12 05:15:35] apptainer works
[2025-10-12 05:15:35] Set ATHENA_PROC_NUMBER=9
[2025-10-12 05:15:35] Set ATHENA_CORE_NUMBER=9
[2025-10-12 05:15:35] Starting ATLAS job with PandaID=6839221431
[2025-10-12 05:15:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:27:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:27:41] 2025-10-12 13:26:31,979 | INFO     | PID=3363038 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:27:41] 2025-10-12 13:26:31,979 | INFO     | .. there are 17 such processes running
[2025-10-12 09:27:41] 2025-10-12 13:26:32,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 09:27:41] 2025-10-12 13:26:32,705 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2549.3032708333335
[2025-10-12 09:27:41] 2025-10-12 13:26:32,741 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6839221431/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:27:41] 2025-10-12 13:26:32,742 | INFO     | extracted standard info from prmon json
[2025-10-12 09:27:41] 2025-10-12 13:26:32,742 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:27:41] 2025-10-12 13:26:32,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:27:41] 2025-10-12 13:26:32,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:27:41] 2025-10-12 13:26:32,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:27:41] 2025-10-12 13:26:32,746 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:27:41] 2025-10-12 13:26:32,747 | INFO     | sum of square deviations: 4394557572.347121
[2025-10-12 09:27:41] 2025-10-12 13:26:32,749 | INFO     | sum of deviations: -8286341243.049587
[2025-10-12 09:27:41] 2025-10-12 13:26:32,749 | INFO     | mean x: 1760268133.9173553
[2025-10-12 09:27:41] 2025-10-12 13:26:32,749 | INFO     | mean y: 2570719.7975206613
[2025-10-12 09:27:41] 2025-10-12 13:26:32,749 | INFO     | -- intersect: 3321717686.6479006
[2025-10-12 09:27:41] 2025-10-12 13:26:32,749 | INFO     | intersect: 3321717686.6479006
[2025-10-12 09:27:41] 2025-10-12 13:26:32,750 | INFO     | chi2: 3.3639557980084374
[2025-10-12 09:27:41] 2025-10-12 13:26:32,750 | INFO     | sum of square deviations: 4127768855.805921
[2025-10-12 09:27:41] 2025-10-12 13:26:32,752 | INFO     | sum of deviations: 7685187309.173009
[2025-10-12 09:27:41] 2025-10-12 13:26:32,752 | INFO     | mean x: 1760267981.421941
[2025-10-12 09:27:41] 2025-10-12 13:26:32,752 | INFO     | mean y: 2579699.9282700424
[2025-10-12 09:27:41] 2025-10-12 13:26:32,752 | INFO     | -- intersect: -3274732965.614926
[2025-10-12 09:27:41] 2025-10-12 13:26:32,752 | INFO     | intersect: -3274732965.614926
[2025-10-12 09:27:41] 2025-10-12 13:26:32,753 | INFO     | chi2: 2.6868463976702683
[2025-10-12 09:27:41] 2025-10-12 13:26:32,753 | INFO     | current chi2=2.6868463976702683 (change=20.128367939288562 %)
[2025-10-12 09:27:41] 2025-10-12 13:26:32,753 | INFO     | right removable region: 236
[2025-10-12 09:27:41] 2025-10-12 13:26:32,753 | INFO     | sum of square deviations: 4127721763.957808
[2025-10-12 09:27:41] 2025-10-12 13:26:32,755 | INFO     | sum of deviations: -64128533172.75949
[2025-10-12 09:27:41] 2025-10-12 13:26:32,755 | INFO     | mean x: 1760268286.4261603
[2025-10-12 09:27:41] 2025-10-12 13:26:32,756 | INFO     | mean y: 2602465.670886076
[2025-10-12 09:27:41] 2025-10-12 13:26:32,756 | INFO     | -- intersect: 27350236258.409824
[2025-10-12 09:27:41] 2025-10-12 13:26:32,756 | INFO     | intersect: 27350236258.409824
[2025-10-12 09:27:41] 2025-10-12 13:26:32,756 | INFO     | chi2: 1.1073472263351678
[2025-10-12 09:27:41] 2025-10-12 13:26:32,756 | INFO     | current chi2=1.1073472263351678 (change=67.08199236771331 %)
[2025-10-12 09:27:41] 2025-10-12 13:26:32,757 | INFO     | sum of square deviations: 3871938331.754312
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | sum of deviations: -72730744448.31894
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | mean x: 1760268438.9267242
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | mean y: 2607555.922413793
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | -- intersect: 33067605761.618156
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | intersect: 33067605761.618156
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | chi2: 1.0074323227725692
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | current chi2=1.0074323227725692 (change=9.022906382605298 %)
[2025-10-12 09:27:41] 2025-10-12 13:26:32,759 | INFO     | left removable region: 20
[2025-10-12 09:27:41] 2025-10-12 13:26:32,760 | INFO     | sum of square deviations: 3124836189.958334
[2025-10-12 09:27:41] 2025-10-12 13:26:32,761 | INFO     | sum of deviations: -45749400169.819405
[2025-10-12 09:27:41] 2025-10-12 13:26:32,761 | INFO     | mean x: 1760268560.9305556
[2025-10-12 09:27:41] 2025-10-12 13:26:32,761 | INFO     | mean y: 2610984.7453703703
[2025-10-12 09:27:41] 2025-10-12 13:26:32,761 | INFO     | -- intersect: 25773955754.481255
[2025-10-12 09:27:41] 2025-10-12 13:26:32,761 | INFO     | intersect: 25773955754.481255
[2025-10-12 09:27:41] 2025-10-12 13:26:32,761 | INFO     | chi2: 0.25966933303736073
[2025-10-12 09:27:41] 2025-10-12 13:26:32,762 | INFO     | -- intersect: 25773955754.481255
[2025-10-12 09:27:41] 2025-10-12 13:26:32,762 | INFO     | current memory leak: -14.64 B/s (using 216 data points, chi2=0.26)
[2025-10-12 09:27:41] 2025-10-12 13:26:32,762 | INFO     | could have reported an average CPU frequency of 2566 MHz (12 samples)
[2025-10-12 09:27:41] 2025-10-12 13:26:32,762 | INFO     | ..............................
[2025-10-12 09:27:41] 2025-10-12 13:26:32,762 | INFO     | . Timing measurements:
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . get job = 0 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . initial setup = 8 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . payload setup = 41 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . stage-in = 0 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . payload execution = 14787 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . stage-out = 8 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | . log creation = 1 s
[2025-10-12 09:27:41] 2025-10-12 13:26:32,763 | INFO     | ..............................
[2025-10-12 09:27:41] 2025-10-12 13:26:33,005 | INFO     | time since job start (14967s) is within the limit (172800.0s)
[2025-10-12 09:27:41] 2025-10-12 13:26:33,103 | INFO     | 
[2025-10-12 09:27:41] 2025-10-12 13:26:33,103 | INFO     | job summary report
[2025-10-12 09:27:41] 2025-10-12 13:26:33,103 | INFO     | --------------------------------------------------
[2025-10-12 09:27:41] 2025-10-12 13:26:33,103 | INFO     | PanDA job id: 6839221431
[2025-10-12 09:27:41] 2025-10-12 13:26:33,103 | INFO     | task id: 46676269
[2025-10-12 09:27:41] 2025-10-12 13:26:33,103 | INFO     | errors: (none)
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | pilot state: finished 
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | transexitcode: 0
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | exeerrorcode: 0
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | exeerrordiag: 
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | exitcode: 0
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | exitmsg: OK
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | cpuconsumptiontime: 46637 s
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | nevents: 400
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | neventsw: 0
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | pid: 3369939
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | pgrp: 3369939
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | corecount: 9
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | event service: False
[2025-10-12 09:27:41] 2025-10-12 13:26:33,104 | INFO     | sizes: {0: 2347978, 1: 2348579, 2: 2348691, 3: 2348890, 15: 2348890, 25: 2348918, 37: 2349074, 43: 2349364, 48: 2349392, 14834: 2380210, 14843: 2389208, 14846: 238
[2025-10-12 09:27:41] 2025-10-12 13:26:33,105 | INFO     | --------------------------------------------------
[2025-10-12 09:27:41] 2025-10-12 13:26:33,105 | INFO     | 
[2025-10-12 09:27:41] 2025-10-12 13:26:33,105 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 09:27:41] 2025-10-12 13:26:33,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:27:41] 2025-10-12 13:26:33,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:27:41] 2025-10-12 13:26:33,228 | INFO     | job 6839221431 has completed (purged errors)
[2025-10-12 09:27:41] 2025-10-12 13:26:33,228 | INFO     | overall cleanup function is called
[2025-10-12 09:27:41] 2025-10-12 13:26:34,254 | INFO     | --- collectZombieJob: --- 10, [3369939]
[2025-10-12 09:27:41] 2025-10-12 13:26:34,254 | INFO     | zombie collector waiting for pid 3369939
[2025-10-12 09:27:41] 2025-10-12 13:26:34,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:27:41] 2025-10-12 13:26:34,259 | INFO     | collected zombie processes
[2025-10-12 09:27:41] 2025-10-12 13:26:34,259 | INFO     | will attempt to kill all subprocesses of pid=3369939
[2025-10-12 09:27:41] 2025-10-12 13:26:35,905 | INFO     | process IDs to be killed: [3369939] (in reverse order)
[2025-10-12 09:27:41] 2025-10-12 13:26:36,756 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:27:41] 2025-10-12 13:26:36,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:27:41] 2025-10-12 13:26:36,836 | INFO     | did not find any defunct processes belonging to 3369939
[2025-10-12 09:27:41] 2025-10-12 13:26:36,924 | INFO     | did not find any defunct processes belonging to 3369939
[2025-10-12 09:27:41] 2025-10-12 13:26:36,924 | INFO     | ready for new job
[2025-10-12 09:27:41] 2025-10-12 13:26:36,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:27:41] 2025-10-12 13:26:36,947 | INFO     | ***************************************
[2025-10-12 09:27:41] 2025-10-12 13:26:36,947 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:27:41] 2025-10-12 13:26:36,947 | INFO     | ***************************************
[2025-10-12 09:27:41] 2025-10-12 13:26:36,947 | INFO     | 
[2025-10-12 09:27:41] 2025-10-12 13:26:37,000 | INFO     | architecture information:
[2025-10-12 09:27:41] 2025-10-12 13:26:37,004 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:27:41] 2025-10-12 13:26:37,119 | INFO     | cat /etc/os-release:
[2025-10-12 09:27:41] NAME="CentOS Linux"
[2025-10-12 09:27:41] VERSION="7 (Core)"
[2025-10-12 09:27:41] ID="centos"
[2025-10-12 09:27:41] ID_LIKE="rhel fedora"
[2025-10-12 09:27:41] VERSION_ID="7"
[2025-10-12 09:27:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:27:41] ANSI_COLOR="0;31"
[2025-10-12 09:27:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:27:41] HOME_URL="https://www.centos.org/"
[2025-10-12 09:27:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:27:41] 
[2025-10-12 09:27:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:27:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:27:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:27:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:27:41] 
[2025-10-12 09:27:41] 2025-10-12 13:26:37,119 | INFO     | ***************************************
[2025-10-12 09:27:41] 2025-10-12 13:26:37,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 09:27:41] 2025-10-12 13:26:37,683 | INFO     | sufficient remaining disk space (127238406144 B)
[2025-10-12 09:27:41] 2025-10-12 13:26:37,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:27:41] 2025-10-12 13:26:37,684 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:27:41] 2025-10-12 13:26:37,684 | INFO     | update_server=False
[2025-10-12 09:27:41] 2025-10-12 13:26:37,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:27:41] 2025-10-12 13:26:37,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:27:41] 2025-10-12 13:26:37,685 | INFO     | aborting loop
[2025-10-12 09:27:41] 2025-10-12 13:26:37,705 | INFO     | all data control threads have been joined
[2025-10-12 09:27:41] 2025-10-12 13:26:37,907 | INFO     | all payload control threads have been joined
[2025-10-12 09:27:41] 2025-10-12 13:26:38,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:27:41] 2025-10-12 13:26:38,565 | INFO     | all job control threads have been joined
[2025-10-12 09:27:41] 2025-10-12 13:26:38,693 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,699 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,703 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,711 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,712 | INFO     | [job] validate thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,720 | INFO     | [data] control thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,843 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,844 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:38,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:27:41] 2025-10-12 13:26:38,913 | INFO     | [payload] control thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:39,117 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:39,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:39,533 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:39,571 | INFO     | [job] control thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:39,775 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:40,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:27:41] 2025-10-12 13:26:40,901 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:26:44,612 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:27:41] 2025-10-12 13:27:10,671 | INFO     | PID=3363038 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:27:41] 2025-10-12 13:27:10,672 | INFO     | .. there are 17 such processes running
[2025-10-12 09:27:41] 2025-10-12 13:27:10,672 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:27:41] 2025-10-12 13:27:10,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:27:41] 2025-10-12 13:27:10,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:27:41] 2025-10-12 13:27:31,644 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:27:41] 2025-10-12 13:27:33,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225297270592)>', '<ExcThread(monitor, started 140224483018496)>']
[2025-10-12 09:27:41] 2025-10-12 13:27:33,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:27:41] 2025-10-12 13:27:33,836 | INFO     | [monitor] control thread has ended
[2025-10-12 09:27:41] 2025-10-12 13:27:38,496 | INFO     | all workflow threads have been joined
[2025-10-12 09:27:41] 2025-10-12 13:27:38,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:27:41] 2025-10-12 13:27:38,497 | INFO     | traces error code: 0
[2025-10-12 09:27:41] 2025-10-12 13:27:38,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:27:41] 2025-10-12 13:27:39,456 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:27:41] 2025-10-12 13:27:39,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:27:41] 2025-10-12 13:27:39,527 [wrapper] pilotpid: 3363038
[2025-10-12 09:27:41] 2025-10-12 13:27:39,560 [wrapper] Pilot exit status: 0
[2025-10-12 09:27:41] 2025-10-12 13:27:39,749 [wrapper] pandaids: 6839221431
[2025-10-12 09:27:41] 2025-10-12 13:27:40,336 [wrapper] cleanup supervisor_pilot 3893488 3363039
[2025-10-12 09:27:41] 2025-10-12 13:27:40,401 [wrapper] Test setup, not cleaning
[2025-10-12 09:27:41] 2025-10-12 13:27:40,431 [wrapper] apfmon messages muted
[2025-10-12 09:27:41] 2025-10-12 13:27:40,478 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:27:41] 2025-10-12 13:27:40,522 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:27:41]  *** Error codes and diagnostics ***
[2025-10-12 09:27:41]     "exeErrorCode": 0,
[2025-10-12 09:27:41]     "exeErrorDiag": "",
[2025-10-12 09:27:41]     "pilotErrorCode": 0,
[2025-10-12 09:27:41]     "pilotErrorDiag": "",
[2025-10-12 09:27:41]  *** Listing of results directory ***
[2025-10-12 09:27:41] total 420908
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:28 queuedata.json
[2025-10-12 09:27:41] -rwx------. 1 boincer umatlas     36292 Oct 11 21:29 runpilot2-wrapper.sh
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:27:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:15 run_atlas
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:15 job.xml
[2025-10-12 09:27:41] -rw-r--r--. 2 boincer umatlas 218589336 Oct 12 05:15 EVNT.46676267._003149.pool.root.1
[2025-10-12 09:27:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:15 start_atlas.sh
[2025-10-12 09:27:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:15 shared
[2025-10-12 09:27:41] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 05:15 input.tar.gz
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:15 boinc_lockfile
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 05:15 pandaJob.out
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas    975520 Oct 12 05:16 agis_schedconf.cvmfs.json
[2025-10-12 09:27:41] drwx------. 5 boincer umatlas      4096 Oct 12 05:17 pilot3
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas 203797906 Oct 12 09:24 HITS.46676269._068516.pool.root.1
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:24 boinc_task_state.xml
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas      1046 Oct 12 09:25 memory_monitor_summary.json
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas    480501 Oct 12 09:25 log.46676269._068516.job.log.tgz.1
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas        95 Oct 12 09:26 pilot_heartbeat.json
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas      7833 Oct 12 09:26 heartbeat.json
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 09:27 init_data.xml
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:27 boinc_mmap_file
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas      4825 Oct 12 09:27 pilotlog.txt
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:27 wrapper_checkpoint.txt
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas   1878868 Oct 12 09:27 log.46676269._068516.job.log.1
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas       357 Oct 12 09:27 output.list
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:27 runtime_log
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas   2375680 Oct 12 09:27 result.tar.gz
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas       658 Oct 12 09:27 SCxNDmG5zR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmevSMDmMr5SIn.diag
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 09:27 runtime_log.err
[2025-10-12 09:27:41] -rw-r--r--. 1 boincer umatlas     21318 Oct 12 09:27 stderr.txt
[2025-10-12 09:27:41] HITS file was successfully produced:
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas 203797906 Oct 12 09:24 shared/HITS.pool.root.1
[2025-10-12 09:27:41]  *** Contents of shared directory: ***
[2025-10-12 09:27:41] total 415396
[2025-10-12 09:27:41] -rw-r--r--. 2 boincer umatlas 218589336 Oct 12 05:15 ATLAS.root_0
[2025-10-12 09:27:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:15 start_atlas.sh
[2025-10-12 09:27:41] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 05:15 input.tar.gz
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas 203797906 Oct 12 09:24 HITS.pool.root.1
[2025-10-12 09:27:41] -rw-------. 1 boincer umatlas   2375680 Oct 12 09:27 result.tar.gz
09:27:42 (3358989): run_atlas exited; CPU time 47207.452696
09:27:42 (3358989): called boinc_finish(0)

</stderr_txt>
]]>

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