Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:19:42 (21623): wrapper (7.7.26015): starting
03:19:42 (21623): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 03:19:42] Arguments: --nthreads 8
[2025-10-12 03:19:42] Threads: 8
[2025-10-12 03:19:42] Checking for CVMFS
[2025-10-12 03:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:19:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:19:43] 2.11.2.0 2936 195424 81728 151612 2 56 11870344 20275201 1 130560 1 67475070 99.976 8500048 26882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:19:43] CVMFS is ok
[2025-10-12 03:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:19:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:19:43] Further information can be found at the LHC@home message board.
[2025-10-12 03:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:19:43] Checking for apptainer binary...
[2025-10-12 03:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:19:43] Running /usr/bin/apptainer --version
[2025-10-12 03:19:43] apptainer version 1.3.2-1.el7
[2025-10-12 03:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:19:45] c-204-13.aglt2.org
[2025-10-12 03:19:45] apptainer works
[2025-10-12 03:19:45] Set ATHENA_PROC_NUMBER=8
[2025-10-12 03:19:45] Set ATHENA_CORE_NUMBER=8
[2025-10-12 03:19:45] Starting ATLAS job with PandaID=6839316594
[2025-10-12 03:19:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:27:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:27:22] 2025-10-12 09:26:30,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:27:22] 2025-10-12 09:26:32,053 | INFO     | time since job start (7589s) is within the limit (172800.0s)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,459 | INFO     | monitor loop #563: job 0:6839316594 is in state 'finished'
[2025-10-12 05:27:22] 2025-10-12 09:26:33,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,512 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 05:27:22] 2025-10-12 09:26:33,515 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-10-12 05:27:22] 2025-10-12 09:26:33,516 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839316594/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,517 | INFO     | extracted standard info from prmon json
[2025-10-12 05:27:22] 2025-10-12 09:26:33,517 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:27:22] 2025-10-12 09:26:33,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:27:22] 2025-10-12 09:26:33,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:27:22] 2025-10-12 09:26:33,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:27:22] 2025-10-12 09:26:33,520 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:27:22] 2025-10-12 09:26:33,521 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,521 | INFO     | sum of deviations: -8146891539.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,521 | INFO     | mean x: 1760257386.5
[2025-10-12 05:27:22] 2025-10-12 09:26:33,521 | INFO     | mean y: 2588342.9032258065
[2025-10-12 05:27:22] 2025-10-12 09:26:33,522 | INFO     | -- intersect: 24260470186.107315
[2025-10-12 05:27:22] 2025-10-12 09:26:33,522 | INFO     | intersect: 24260470186.107315
[2025-10-12 05:27:22] 2025-10-12 09:26:33,522 | INFO     | chi2: 1.6868910210015309
[2025-10-12 05:27:22] 2025-10-12 09:26:33,522 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,523 | INFO     | sum of deviations: -6671975223.000001
[2025-10-12 05:27:22] 2025-10-12 09:26:33,523 | INFO     | mean x: 1760257234.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,523 | INFO     | mean y: 2591620.0840336136
[2025-10-12 05:27:22] 2025-10-12 09:26:33,523 | INFO     | -- intersect: 22479776817.581177
[2025-10-12 05:27:22] 2025-10-12 09:26:33,523 | INFO     | intersect: 22479776817.581177
[2025-10-12 05:27:22] 2025-10-12 09:26:33,524 | INFO     | chi2: 1.688940429489333
[2025-10-12 05:27:22] 2025-10-12 09:26:33,524 | INFO     | current chi2=1.688940429489333 (change=-0.12149027188403999 %)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,524 | INFO     | right removable region: 118
[2025-10-12 05:27:22] 2025-10-12 09:26:33,524 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,525 | INFO     | sum of deviations: -28163392621.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,525 | INFO     | mean x: 1760257539.0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,525 | INFO     | mean y: 2632019.319327731
[2025-10-12 05:27:22] 2025-10-12 09:26:33,525 | INFO     | -- intersect: 94882166229.16765
[2025-10-12 05:27:22] 2025-10-12 09:26:33,525 | INFO     | intersect: 94882166229.16765
[2025-10-12 05:27:22] 2025-10-12 09:26:33,525 | INFO     | chi2: 0.10510209658714506
[2025-10-12 05:27:22] 2025-10-12 09:26:33,526 | INFO     | current chi2=0.10510209658714506 (change=93.76947916144907 %)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,526 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 05:27:22] 2025-10-12 09:26:33,526 | INFO     | sum of deviations: -26552736451.499996
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | mean x: 1760257691.5
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | mean y: 2628095.8684210526
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | -- intersect: 101750650378.18474
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | intersect: 101750650378.18474
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | chi2: 0.09710783212691415
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | current chi2=0.09710783212691415 (change=7.606189333818371 %)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,527 | INFO     | left removable region: 20
[2025-10-12 05:27:22] 2025-10-12 09:26:33,528 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 05:27:22] 2025-10-12 09:26:33,528 | INFO     | sum of deviations: -19671259595.5
[2025-10-12 05:27:22] 2025-10-12 09:26:33,528 | INFO     | mean x: 1760257813.5
[2025-10-12 05:27:22] 2025-10-12 09:26:33,528 | INFO     | mean y: 2620895.887755102
[2025-10-12 05:27:22] 2025-10-12 09:26:33,528 | INFO     | -- intersect: 118660620333.63484
[2025-10-12 05:27:22] 2025-10-12 09:26:33,529 | INFO     | intersect: 118660620333.63484
[2025-10-12 05:27:22] 2025-10-12 09:26:33,529 | INFO     | chi2: 0.08626840694945694
[2025-10-12 05:27:22] 2025-10-12 09:26:33,529 | INFO     | -- intersect: 118660620333.63484
[2025-10-12 05:27:22] 2025-10-12 09:26:33,529 | INFO     | current memory leak: -67.41 B/s (using 98 data points, chi2=0.09)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,529 | INFO     | could have reported an average CPU frequency of 1943 MHz (8 samples)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | ..............................
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | . Timing measurements:
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | . get job = 0 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | . initial setup = 2 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | . payload setup = 8 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | . stage-in = 0 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,530 | INFO     | . payload execution = 7553 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,531 | INFO     | . stage-out = 0 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,531 | INFO     | . log creation = 0 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,531 | INFO     | ..............................
[2025-10-12 05:27:22] 2025-10-12 09:26:33,624 | INFO     | 
[2025-10-12 05:27:22] 2025-10-12 09:26:33,625 | INFO     | job summary report
[2025-10-12 05:27:22] 2025-10-12 09:26:33,625 | INFO     | --------------------------------------------------
[2025-10-12 05:27:22] 2025-10-12 09:26:33,625 | INFO     | PanDA job id: 6839316594
[2025-10-12 05:27:22] 2025-10-12 09:26:33,625 | INFO     | task id: 46676269
[2025-10-12 05:27:22] 2025-10-12 09:26:33,625 | INFO     | errors: (none)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | pilot state: finished 
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | transexitcode: 0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | exeerrorcode: 0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | exeerrordiag: 
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | exitcode: 0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | exitmsg: OK
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | cpuconsumptiontime: 55871 s
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | nevents: 400
[2025-10-12 05:27:22] 2025-10-12 09:26:33,626 | INFO     | neventsw: 0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | pid: 1548
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | pgrp: 1548
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | corecount: 8
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | event service: False
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 7565: 2376691, 7566: 2385689, 7567: 2385745, 7573: 2386067}
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | --------------------------------------------------
[2025-10-12 05:27:22] 2025-10-12 09:26:33,627 | INFO     | 
[2025-10-12 05:27:22] 2025-10-12 09:26:33,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 05:27:22] 2025-10-12 09:26:33,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,662 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,662 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:27:22] 2025-10-12 09:26:33,663 | INFO     | job 6839316594 has completed (purged errors)
[2025-10-12 05:27:22] 2025-10-12 09:26:33,663 | INFO     | overall cleanup function is called
[2025-10-12 05:27:22] 2025-10-12 09:26:34,668 | INFO     | --- collectZombieJob: --- 10, [1548]
[2025-10-12 05:27:22] 2025-10-12 09:26:34,669 | INFO     | zombie collector waiting for pid 1548
[2025-10-12 05:27:22] 2025-10-12 09:26:34,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:27:22] 2025-10-12 09:26:34,669 | INFO     | collected zombie processes
[2025-10-12 05:27:22] 2025-10-12 09:26:34,669 | INFO     | will attempt to kill all subprocesses of pid=1548
[2025-10-12 05:27:22] 2025-10-12 09:26:34,769 | INFO     | process IDs to be killed: [1548] (in reverse order)
[2025-10-12 05:27:22] 2025-10-12 09:26:34,832 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:27:22] 2025-10-12 09:26:34,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:27:22] 2025-10-12 09:26:34,838 | INFO     | did not find any defunct processes belonging to 1548
[2025-10-12 05:27:22] 2025-10-12 09:26:34,842 | INFO     | did not find any defunct processes belonging to 1548
[2025-10-12 05:27:22] 2025-10-12 09:26:34,842 | INFO     | ready for new job
[2025-10-12 05:27:22] 2025-10-12 09:26:34,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:27:22] 2025-10-12 09:26:34,844 | INFO     | ***************************************
[2025-10-12 05:27:22] 2025-10-12 09:26:34,844 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:27:22] 2025-10-12 09:26:34,845 | INFO     | ***************************************
[2025-10-12 05:27:22] 2025-10-12 09:26:34,845 | INFO     | 
[2025-10-12 05:27:22] 2025-10-12 09:26:34,845 | INFO     | architecture information:
[2025-10-12 05:27:22] 2025-10-12 09:26:34,846 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:27:22] 2025-10-12 09:26:34,866 | INFO     | cat /etc/os-release:
[2025-10-12 05:27:22] NAME="CentOS Linux"
[2025-10-12 05:27:22] VERSION="7 (Core)"
[2025-10-12 05:27:22] ID="centos"
[2025-10-12 05:27:22] ID_LIKE="rhel fedora"
[2025-10-12 05:27:22] VERSION_ID="7"
[2025-10-12 05:27:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:27:22] ANSI_COLOR="0;31"
[2025-10-12 05:27:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:27:22] HOME_URL="https://www.centos.org/"
[2025-10-12 05:27:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:27:22] 
[2025-10-12 05:27:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:27:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:27:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:27:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:27:22] 
[2025-10-12 05:27:22] 2025-10-12 09:26:34,866 | INFO     | ***************************************
[2025-10-12 05:27:22] 2025-10-12 09:26:35,370 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 05:27:22] 2025-10-12 09:26:35,391 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-12 05:27:22] 2025-10-12 09:26:35,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:27:22] 2025-10-12 09:26:35,393 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:27:22] 2025-10-12 09:26:35,393 | INFO     | update_server=False
[2025-10-12 05:27:22] 2025-10-12 09:26:35,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:27:22] 2025-10-12 09:26:35,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:27:22] 2025-10-12 09:26:35,394 | INFO     | aborting loop
[2025-10-12 05:27:22] 2025-10-12 09:26:35,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:27:22] 2025-10-12 09:26:35,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:27:22] 2025-10-12 09:26:35,504 | INFO     | all data control threads have been joined
[2025-10-12 05:27:22] 2025-10-12 09:26:36,397 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:36,399 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:36,400 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:36,402 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:36,444 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:36,510 | INFO     | [data] control thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:36,523 | INFO     | all payload control threads have been joined
[2025-10-12 05:27:22] 2025-10-12 09:26:36,641 | INFO     | all job control threads have been joined
[2025-10-12 05:27:22] 2025-10-12 09:26:36,795 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,083 | INFO     | [job] validate thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,378 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,400 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,525 | INFO     | [payload] control thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,646 | INFO     | [job] control thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,672 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:37,876 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:26:38,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:27:22] 2025-10-12 09:26:42,040 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:27:22] 2025-10-12 09:27:05,261 | INFO     | PID=25392 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 05:27:22] 2025-10-12 09:27:05,262 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:27:22] 2025-10-12 09:27:05,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:27:22] 2025-10-12 09:27:05,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:27:22] 2025-10-12 09:27:15,319 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:27:22] 2025-10-12 09:27:16,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146123323200)>', '<ExcThread(monitor, started 140145286166272)>']
[2025-10-12 05:27:22] 2025-10-12 09:27:17,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:27:22] 2025-10-12 09:27:17,313 | INFO     | [monitor] control thread has ended
[2025-10-12 05:27:22] 2025-10-12 09:27:21,770 | INFO     | all workflow threads have been joined
[2025-10-12 05:27:22] 2025-10-12 09:27:21,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:27:22] 2025-10-12 09:27:21,771 | INFO     | traces error code: 0
[2025-10-12 05:27:22] 2025-10-12 09:27:21,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:27:22] 2025-10-12 09:27:21,890 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:27:22] 2025-10-12 09:27:21,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:27:22] 2025-10-12 09:27:21,899 [wrapper] pilotpid: 25392
[2025-10-12 05:27:22] 2025-10-12 09:27:21,905 [wrapper] Pilot exit status: 0
[2025-10-12 05:27:22] 2025-10-12 09:27:21,925 [wrapper] pandaids: 6839316594
[2025-10-12 05:27:22] 2025-10-12 09:27:21,985 [wrapper] cleanup supervisor_pilot   760 25393
[2025-10-12 05:27:22] 2025-10-12 09:27:21,990 [wrapper] Test setup, not cleaning
[2025-10-12 05:27:22] 2025-10-12 09:27:21,995 [wrapper] apfmon messages muted
[2025-10-12 05:27:22] 2025-10-12 09:27:22,000 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:27:22] 2025-10-12 09:27:22,005 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:27:22]  *** Error codes and diagnostics ***
[2025-10-12 05:27:22]     "exeErrorCode": 0,
[2025-10-12 05:27:22]     "exeErrorDiag": "",
[2025-10-12 05:27:22]     "pilotErrorCode": 0,
[2025-10-12 05:27:22]     "pilotErrorDiag": "",
[2025-10-12 05:27:22]  *** Listing of results directory ***
[2025-10-12 05:27:22] total 410520
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:22 queuedata.json
[2025-10-12 05:27:22] -rwx------ 1 boincer umatlas     36292 Oct 11 22:22 runpilot2-wrapper.sh
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:27:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:19 run_atlas
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:19 job.xml
[2025-10-12 05:27:22] -rw-r--r-- 2 boincer umatlas 223087723 Oct 12 03:19 EVNT.46676267._003179.pool.root.1
[2025-10-12 05:27:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:19 start_atlas.sh
[2025-10-12 05:27:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:19 shared
[2025-10-12 05:27:22] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 03:19 input.tar.gz
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:19 boinc_lockfile
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 03:19 pandaJob.out
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas    975520 Oct 12 03:20 agis_schedconf.cvmfs.json
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas   1560580 Oct 12 03:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:27:22] drwx------ 5 boincer umatlas      4096 Oct 12 03:20 pilot3
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 05:21 init_data.xml
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas 190517136 Oct 12 05:25 HITS.46676269._069264.pool.root.1
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas       529 Oct 12 05:26 boinc_task_state.xml
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas      1050 Oct 12 05:26 memory_monitor_summary.json
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas    364042 Oct 12 05:26 log.46676269._069264.job.log.tgz.1
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas      7849 Oct 12 05:26 heartbeat.json
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 05:26 boinc_mmap_file
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas        27 Oct 12 05:26 wrapper_checkpoint.txt
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas        95 Oct 12 05:27 pilot_heartbeat.json
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas      4746 Oct 12 05:27 pilotlog.txt
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas   1067368 Oct 12 05:27 log.46676269._069264.job.log.1
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas       357 Oct 12 05:27 output.list
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 05:27 runtime_log
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas   1454080 Oct 12 05:27 result.tar.gz
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 05:27 runtime_log.err
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas       659 Oct 12 05:27 EVmLDm6t0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfKiNDmveId7m.diag
[2025-10-12 05:27:22] -rw-r--r-- 1 boincer umatlas     21105 Oct 12 05:27 stderr.txt
[2025-10-12 05:27:22] HITS file was successfully produced:
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas 190517136 Oct 12 05:25 shared/HITS.pool.root.1
[2025-10-12 05:27:22]  *** Contents of shared directory: ***
[2025-10-12 05:27:22] total 405916
[2025-10-12 05:27:22] -rw-r--r-- 2 boincer umatlas 223087723 Oct 12 03:19 ATLAS.root_0
[2025-10-12 05:27:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:19 start_atlas.sh
[2025-10-12 05:27:22] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 03:19 input.tar.gz
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas 190517136 Oct 12 05:25 HITS.pool.root.1
[2025-10-12 05:27:22] -rw------- 1 boincer umatlas   1454080 Oct 12 05:27 result.tar.gz
05:27:23 (21623): run_atlas exited; CPU time 55801.553188
05:27:23 (21623): called boinc_finish(0)

</stderr_txt>
]]>

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