Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:41:36 (3463011): wrapper (7.7.26015): starting
17:41:36 (3463011): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 17:41:36] Arguments: --nthreads 6
[2025-10-12 17:41:36] Threads: 6
[2025-10-12 17:41:36] Checking for CVMFS
[2025-10-12 17:41:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:41:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:41:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:41:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:41:37] 2.11.5.0 3651556 4072 71592 151613 3 188 38663252 52428801 1858 130560 0 12651337 99.998 136662 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 17:41:37] CVMFS is ok
[2025-10-12 17:41:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:41:37] Checking for apptainer binary...
[2025-10-12 17:41:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:41:37] Running /usr/bin/apptainer --version
[2025-10-12 17:41:37] apptainer version 1.3.5-1.el9
[2025-10-12 17:41:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:41:37] testio008
[2025-10-12 17:41:37] apptainer works
[2025-10-12 17:41:37] Set ATHENA_PROC_NUMBER=6
[2025-10-12 17:41:37] Set ATHENA_CORE_NUMBER=6
[2025-10-12 17:41:37] Starting ATLAS job with PandaID=6839242493
[2025-10-12 17:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:51:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:51:56] 2025-10-12 09:50:51,400 | INFO     | time since job start (4147s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:50:52,544 | INFO     | monitor loop #321: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:50:52,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:50:53,406 | INFO     | time since job start (4149s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:50:55,047 | INFO     | monitor loop #322: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:50:55,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:50:55,411 | INFO     | time since job start (4151s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:50:57,416 | INFO     | time since job start (4153s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:50:57,550 | INFO     | monitor loop #323: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:50:57,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:50:59,421 | INFO     | time since job start (4155s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:00,053 | INFO     | monitor loop #324: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:00,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:01,426 | INFO     | time since job start (4157s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:02,556 | INFO     | monitor loop #325: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:02,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:03,431 | INFO     | time since job start (4159s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:05,059 | INFO     | monitor loop #326: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:05,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:05,436 | INFO     | time since job start (4161s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:07,441 | INFO     | time since job start (4163s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:07,562 | INFO     | monitor loop #327: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:07,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:09,446 | INFO     | time since job start (4165s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:10,065 | INFO     | monitor loop #328: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:10,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:11,451 | INFO     | time since job start (4167s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:12,500 | INFO     | PID=3466782 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:51:56] 2025-10-12 09:51:12,500 | INFO     | .. there are 3 such processes running
[2025-10-12 18:51:56] 2025-10-12 09:51:12,568 | INFO     | monitor loop #329: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:12,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:13,500 | INFO     | time since job start (4169s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:15,071 | INFO     | monitor loop #330: job 0:6839242493 is in state 'finished'
[2025-10-12 18:51:56] 2025-10-12 09:51:15,072 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:51:56] 2025-10-12 09:51:15,505 | INFO     | time since job start (4171s) is within the limit (172800.0s)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,120 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:51:56] 2025-10-12 09:51:16,122 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 2000.0003499999998
[2025-10-12 18:51:56] 2025-10-12 09:51:16,126 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6839242493/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,126 | INFO     | extracted standard info from prmon json
[2025-10-12 18:51:56] 2025-10-12 09:51:16,126 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:51:56] 2025-10-12 09:51:16,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:51:56] 2025-10-12 09:51:16,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:51:56] 2025-10-12 09:51:16,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:51:56] 2025-10-12 09:51:16,128 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:51:56] 2025-10-12 09:51:16,128 | INFO     | sum of square deviations: 66959395.0
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | sum of deviations: -2561277851.5
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | mean x: 1760260626.5
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | mean y: 2488976.3833333333
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | -- intersect: 67334587116.18826
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | intersect: 67334587116.18826
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | chi2: 0.026698592395176846
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | -- intersect: 67334587116.18826
[2025-10-12 18:51:56] 2025-10-12 09:51:16,129 | INFO     | current memory leak: -38.25 B/s (using 60 data points, chi2=0.03)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | could have reported an average CPU frequency of 3046 MHz (6 samples)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | ..............................
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . Timing measurements:
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . get job = 0 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . initial setup = 4 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . payload setup = 2 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . stage-in = 0 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . payload execution = 4073 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . stage-out = 0 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | . log creation = 0 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,130 | INFO     | ..............................
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | 
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | job summary report
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | --------------------------------------------------
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | PanDA job id: 6839242493
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | task id: 46676269
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | errors: (none)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | pilot state: finished 
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | transexitcode: 0
[2025-10-12 18:51:56] 2025-10-12 09:51:16,216 | INFO     | exeerrorcode: 0
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | exeerrordiag: 
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | exitcode: 0
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | exitmsg: OK
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | cpuconsumptiontime: 22056 s
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | nevents: 400
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | neventsw: 0
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | pid: 3473520
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | pgrp: 3473520
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | corecount: 6
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | event service: False
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | sizes: {0: 2348806, 2: 2349068, 10: 2349096, 4079: 2375000, 4080: 2383998, 4081: 2384054, 4159: 2384376}
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | --------------------------------------------------
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | 
[2025-10-12 18:51:56] 2025-10-12 09:51:16,217 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 18:51:56] 2025-10-12 09:51:16,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:51:56] 2025-10-12 09:51:16,233 | INFO     | job 6839242493 has completed (purged errors)
[2025-10-12 18:51:56] 2025-10-12 09:51:16,233 | INFO     | overall cleanup function is called
[2025-10-12 18:51:56] 2025-10-12 09:51:17,235 | INFO     | --- collectZombieJob: --- 10, [3473520]
[2025-10-12 18:51:56] 2025-10-12 09:51:17,236 | INFO     | zombie collector waiting for pid 3473520
[2025-10-12 18:51:56] 2025-10-12 09:51:17,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:51:56] 2025-10-12 09:51:17,236 | INFO     | collected zombie processes
[2025-10-12 18:51:56] 2025-10-12 09:51:17,236 | INFO     | will attempt to kill all subprocesses of pid=3473520
[2025-10-12 18:51:56] 2025-10-12 09:51:17,308 | INFO     | process IDs to be killed: [3473520] (in reverse order)
[2025-10-12 18:51:56] 2025-10-12 09:51:17,342 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:51:56] 2025-10-12 09:51:17,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:51:56] 2025-10-12 09:51:17,346 | INFO     | did not find any defunct processes belonging to 3473520
[2025-10-12 18:51:56] 2025-10-12 09:51:17,348 | INFO     | did not find any defunct processes belonging to 3473520
[2025-10-12 18:51:56] 2025-10-12 09:51:17,349 | INFO     | ready for new job
[2025-10-12 18:51:56] 2025-10-12 09:51:17,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:51:56] 2025-10-12 09:51:17,350 | INFO     | ***************************************
[2025-10-12 18:51:56] 2025-10-12 09:51:17,350 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:51:56] 2025-10-12 09:51:17,350 | INFO     | ***************************************
[2025-10-12 18:51:56] 2025-10-12 09:51:17,350 | INFO     | 
[2025-10-12 18:51:56] 2025-10-12 09:51:17,351 | INFO     | architecture information:
[2025-10-12 18:51:56] 2025-10-12 09:51:17,351 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:51:56] 2025-10-12 09:51:17,361 | INFO     | cat /etc/os-release:
[2025-10-12 18:51:56] NAME="CentOS Linux"
[2025-10-12 18:51:56] VERSION="7 (Core)"
[2025-10-12 18:51:56] ID="centos"
[2025-10-12 18:51:56] ID_LIKE="rhel fedora"
[2025-10-12 18:51:56] VERSION_ID="7"
[2025-10-12 18:51:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:51:56] ANSI_COLOR="0;31"
[2025-10-12 18:51:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:51:56] HOME_URL="https://www.centos.org/"
[2025-10-12 18:51:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:51:56] 
[2025-10-12 18:51:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:51:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:51:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:51:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:51:56] 
[2025-10-12 18:51:56] 2025-10-12 09:51:17,362 | INFO     | ***************************************
[2025-10-12 18:51:56] 2025-10-12 09:51:17,864 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 18:51:56] 2025-10-12 09:51:17,871 | INFO     | sufficient remaining disk space (280622006272 B)
[2025-10-12 18:51:56] 2025-10-12 09:51:17,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:51:56] 2025-10-12 09:51:17,872 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:51:56] 2025-10-12 09:51:17,872 | INFO     | update_server=False
[2025-10-12 18:51:56] 2025-10-12 09:51:17,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:51:56] 2025-10-12 09:51:17,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:51:56] 2025-10-12 09:51:17,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:51:56] 2025-10-12 09:51:17,976 | INFO     | all job control threads have been joined
[2025-10-12 18:51:56] 2025-10-12 09:51:18,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:51:56] 2025-10-12 09:51:18,580 | INFO     | aborting loop
[2025-10-12 18:51:56] 2025-10-12 09:51:18,641 | INFO     | all data control threads have been joined
[2025-10-12 18:51:56] 2025-10-12 09:51:18,876 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:18,877 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:18,885 | INFO     | all payload control threads have been joined
[2025-10-12 18:51:56] 2025-10-12 09:51:18,982 | INFO     | [job] control thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,292 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,584 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,598 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,646 | INFO     | [data] control thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,810 | INFO     | [job] validate thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,877 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,890 | INFO     | [payload] control thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,956 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:19,975 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:20,419 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:21,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:51:56] 2025-10-12 09:51:25,050 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:28,692 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:51:56] 2025-10-12 09:51:29,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:51:56] 2025-10-12 09:51:48,613 | INFO     | PID=3466782 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:51:56] 2025-10-12 09:51:48,613 | INFO     | .. there are 3 such processes running
[2025-10-12 18:51:56] 2025-10-12 09:51:48,613 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:51:56] 2025-10-12 09:51:48,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:51:56] 2025-10-12 09:51:48,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:51:56] 2025-10-12 09:51:51,146 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:51:56] 2025-10-12 09:51:51,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125530675008)>', '<ExcThread(monitor, started 140124901857024)>']
[2025-10-12 18:51:56] 2025-10-12 09:51:52,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:51:56] 2025-10-12 09:51:52,630 | INFO     | [monitor] control thread has ended
[2025-10-12 18:51:56] 2025-10-12 09:51:56,681 | INFO     | all workflow threads have been joined
[2025-10-12 18:51:56] 2025-10-12 09:51:56,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:51:56] 2025-10-12 09:51:56,682 | INFO     | traces error code: 0
[2025-10-12 18:51:56] 2025-10-12 09:51:56,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:51:56] 2025-10-12 09:51:56,761 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:51:56] 2025-10-12 09:51:56,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:51:56] 2025-10-12 09:51:56,764 [wrapper] pilotpid: 3466782
[2025-10-12 18:51:56] 2025-10-12 09:51:56,766 [wrapper] Pilot exit status: 0
[2025-10-12 18:51:56] 2025-10-12 09:51:56,773 [wrapper] pandaids: 6839242493
[2025-10-12 18:51:56] 2025-10-12 09:51:56,794 [wrapper] cleanup supervisor_pilot 3530945 3466783
[2025-10-12 18:51:56] 2025-10-12 09:51:56,796 [wrapper] Test setup, not cleaning
[2025-10-12 18:51:56] 2025-10-12 09:51:56,797 [wrapper] apfmon messages muted
[2025-10-12 18:51:56] 2025-10-12 09:51:56,799 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:51:56] 2025-10-12 09:51:56,801 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:51:56]  *** Error codes and diagnostics ***
[2025-10-12 18:51:56]     "exeErrorCode": 0,
[2025-10-12 18:51:56]     "exeErrorDiag": "",
[2025-10-12 18:51:56]     "pilotErrorCode": 0,
[2025-10-12 18:51:56]     "pilotErrorDiag": "",
[2025-10-12 18:51:56]  *** Listing of results directory ***
[2025-10-12 18:51:56] total 418796
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc    557409 Oct 12 10:53 pilot3.tar.gz
[2025-10-12 18:51:56] -rwx------. 1 boinc boinc     36292 Oct 12 10:54 runpilot2-wrapper.sh
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc      5112 Oct 12 10:54 queuedata.json
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc       100 Oct 12 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:51:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 17:41 run_atlas
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc       105 Oct 12 17:41 job.xml
[2025-10-12 18:51:56] -rw-r--r--. 2 boinc boinc 222618073 Oct 12 17:41 EVNT.46676267._003170.pool.root.1
[2025-10-12 18:51:56] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:41 start_atlas.sh
[2025-10-12 18:51:56] drwxrwx--x. 2 boinc boinc        68 Oct 12 17:41 shared
[2025-10-12 18:51:56] -rw-r--r--. 2 boinc boinc    569675 Oct 12 17:41 input.tar.gz
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc      9509 Oct 12 17:41 init_data.xml
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc         0 Oct 12 17:41 boinc_lockfile
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc      2549 Oct 12 17:41 pandaJob.out
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc    975520 Oct 12 17:41 agis_schedconf.cvmfs.json
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc   1560580 Oct 12 17:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:51:56] drwx------. 5 boinc boinc      4096 Oct 12 17:41 pilot3
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc 200535961 Oct 12 18:49 HITS.46676269._069028.pool.root.1
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc       530 Oct 12 18:49 boinc_task_state.xml
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc      1022 Oct 12 18:49 memory_monitor_summary.json
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc    278466 Oct 12 18:49 log.46676269._069028.job.log.tgz.1
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc      7767 Oct 12 18:51 heartbeat.json
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc        95 Oct 12 18:51 pilot_heartbeat.json
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc        27 Oct 12 18:51 wrapper_checkpoint.txt
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:51 boinc_mmap_file
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc      4896 Oct 12 18:51 pilotlog.txt
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc    620861 Oct 12 18:51 log.46676269._069028.job.log.1
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc       357 Oct 12 18:51 output.list
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:51 runtime_log
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc    921600 Oct 12 18:51 result.tar.gz
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc       640 Oct 12 18:51 uvGMDmKT0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7HiNDmrRThfn.diag
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc      8661 Oct 12 18:51 runtime_log.err
[2025-10-12 18:51:56] -rw-r--r--. 1 boinc boinc     21939 Oct 12 18:51 stderr.txt
[2025-10-12 18:51:56] HITS file was successfully produced:
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc 200535961 Oct 12 18:49 shared/HITS.pool.root.1
[2025-10-12 18:51:56]  *** Contents of shared directory: ***
[2025-10-12 18:51:56] total 414716
[2025-10-12 18:51:56] -rw-r--r--. 2 boinc boinc 222618073 Oct 12 17:41 ATLAS.root_0
[2025-10-12 18:51:56] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:41 start_atlas.sh
[2025-10-12 18:51:56] -rw-r--r--. 2 boinc boinc    569675 Oct 12 17:41 input.tar.gz
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc 200535961 Oct 12 18:49 HITS.pool.root.1
[2025-10-12 18:51:56] -rw-------. 1 boinc boinc    921600 Oct 12 18:51 result.tar.gz
18:51:58 (3463011): run_atlas exited; CPU time 22080.434802
18:51:58 (3463011): called boinc_finish(0)

</stderr_txt>
]]>

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