Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:14:41 (31441): wrapper (7.7.26015): starting
03:14:41 (31441): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 03:14:41] Arguments: --nthreads 4
[2025-10-12 03:14:41] Threads: 4
[2025-10-12 03:14:41] Checking for CVMFS
[2025-10-12 03:14:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:14:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:14:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:14:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:14:42] 2.11.2.0 2433 38472 68024 151611 0 59 12539824 20275201 1 130560 0 18118240 99.988 1240016 54358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:14:42] CVMFS is ok
[2025-10-12 03:14:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:14:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:14:42] Further information can be found at the LHC@home message board.
[2025-10-12 03:14:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:14:42] Checking for apptainer binary...
[2025-10-12 03:14:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:14:42] Running /usr/bin/apptainer --version
[2025-10-12 03:14:42] apptainer version 1.3.2-1.el7
[2025-10-12 03:14:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:14:42] c-205-33.aglt2.org
[2025-10-12 03:14:42] apptainer works
[2025-10-12 03:14:42] Set ATHENA_PROC_NUMBER=4
[2025-10-12 03:14:42] Set ATHENA_CORE_NUMBER=4
[2025-10-12 03:14:42] Starting ATLAS job with PandaID=6839242230
[2025-10-12 03:14:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:57:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:57:08] 2025-10-12 08:56:11,390 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:57:08] 2025-10-12 08:56:11,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:57:08] 2025-10-12 08:56:11,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:57:08] 2025-10-12 08:56:11,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:57:08] 2025-10-12 08:56:11,391 | INFO     | fitting pss+swap vs Time
[2025-10-12 04:57:08] 2025-10-12 08:56:11,391 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | sum of deviations: -15810856509.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | mean x: 1760256331.5
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | mean y: 2478406.5
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | -- intersect: 89765263692.5166
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | intersect: 89765263692.5166
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | chi2: 1.9690609886454236
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | sum of deviations: -7368876494.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | mean x: 1760256179.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | mean y: 2506674.515789474
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | -- intersect: 48797587215.43709
[2025-10-12 04:57:08] 2025-10-12 08:56:11,392 | INFO     | intersect: 48797587215.43709
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | chi2: 1.214410708083725
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | current chi2=1.214410708083725 (change=38.32538884846047 %)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | sum of deviations: -5146460017.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | mean x: 1760256026.5
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | mean y: 2515196.888888889
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | -- intersect: 40082921052.61801
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | intersect: 40082921052.61801
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | chi2: 1.2153888381202762
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | current chi2=1.2153888381202762 (change=-0.08054359452204311 %)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | right removable region: 89
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,393 | INFO     | sum of deviations: -24241455144.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | mean x: 1760256484.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | mean y: 2506315.8
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | -- intersect: 160524122073.48303
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | intersect: 160524122073.48303
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | chi2: 0.8784805197960742
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | current chi2=0.8784805197960742 (change=55.38581461611265 %)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | sum of deviations: -22713800302.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | mean x: 1760256636.5
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | mean y: 2500445.533333333
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | -- intersect: 176896646539.33447
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | intersect: 176896646539.33447
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | chi2: 0.8682185293382179
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | current chi2=0.8682185293382179 (change=1.1681523069217887 %)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | left removable region: 20
[2025-10-12 04:57:08] 2025-10-12 08:56:11,394 | INFO     | sum of square deviations: 101843770.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | sum of deviations: -9909203803.999998
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | mean x: 1760256606.0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | mean y: 2534449.434782609
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | -- intersect: 171272131560.68985
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | intersect: 171272131560.68985
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | chi2: 0.06736755930117796
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | -- intersect: 171272131560.68985
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | current memory leak: -97.30 B/s (using 69 data points, chi2=0.07)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | could have reported an average CPU frequency of 2774 MHz (7 samples)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | ..............................
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . Timing measurements:
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . get job = 0 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . initial setup = 1 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . payload setup = 3 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . stage-in = 0 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . payload execution = 6050 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . stage-out = 0 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,395 | INFO     | . log creation = 0 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,396 | INFO     | ..............................
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | 
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | job summary report
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | --------------------------------------------------
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | PanDA job id: 6839242230
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | task id: 46676269
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | errors: (none)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | pilot state: finished 
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | transexitcode: 0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | exeerrorcode: 0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | exeerrordiag: 
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | exitcode: 0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,481 | INFO     | exitmsg: OK
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | cpuconsumptiontime: 23450 s
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | nevents: 400
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | neventsw: 0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | pid: 9295
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | pgrp: 9295
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | corecount: 4
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | event service: False
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | sizes: {0: 2348857, 3: 2349119, 10: 2349147, 6057: 2376066, 6058: 2385064, 6060: 2385120, 6066: 2385442}
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | --------------------------------------------------
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | 
[2025-10-12 04:57:08] 2025-10-12 08:56:11,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 04:57:08] 2025-10-12 08:56:11,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,498 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:57:08] 2025-10-12 08:56:11,499 | INFO     | job 6839242230 has completed (purged errors)
[2025-10-12 04:57:08] 2025-10-12 08:56:11,499 | INFO     | overall cleanup function is called
[2025-10-12 04:57:08] 2025-10-12 08:56:12,506 | INFO     | --- collectZombieJob: --- 10, [9295]
[2025-10-12 04:57:08] 2025-10-12 08:56:12,507 | INFO     | zombie collector waiting for pid 9295
[2025-10-12 04:57:08] 2025-10-12 08:56:12,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:57:08] 2025-10-12 08:56:12,507 | INFO     | collected zombie processes
[2025-10-12 04:57:08] 2025-10-12 08:56:12,507 | INFO     | will attempt to kill all subprocesses of pid=9295
[2025-10-12 04:57:08] 2025-10-12 08:56:12,544 | INFO     | process IDs to be killed: [9295] (in reverse order)
[2025-10-12 04:57:08] 2025-10-12 08:56:12,565 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:57:08] 2025-10-12 08:56:12,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:57:08] 2025-10-12 08:56:12,566 | INFO     | did not find any defunct processes belonging to 9295
[2025-10-12 04:57:08] 2025-10-12 08:56:12,567 | INFO     | did not find any defunct processes belonging to 9295
[2025-10-12 04:57:08] 2025-10-12 08:56:12,567 | INFO     | ready for new job
[2025-10-12 04:57:08] 2025-10-12 08:56:12,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:57:08] 2025-10-12 08:56:12,568 | INFO     | ***************************************
[2025-10-12 04:57:08] 2025-10-12 08:56:12,568 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:57:08] 2025-10-12 08:56:12,568 | INFO     | ***************************************
[2025-10-12 04:57:08] 2025-10-12 08:56:12,568 | INFO     | 
[2025-10-12 04:57:08] 2025-10-12 08:56:12,569 | INFO     | architecture information:
[2025-10-12 04:57:08] 2025-10-12 08:56:12,569 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:57:08] 2025-10-12 08:56:12,577 | INFO     | cat /etc/os-release:
[2025-10-12 04:57:08] NAME="CentOS Linux"
[2025-10-12 04:57:08] VERSION="7 (Core)"
[2025-10-12 04:57:08] ID="centos"
[2025-10-12 04:57:08] ID_LIKE="rhel fedora"
[2025-10-12 04:57:08] VERSION_ID="7"
[2025-10-12 04:57:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:57:08] ANSI_COLOR="0;31"
[2025-10-12 04:57:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:57:08] HOME_URL="https://www.centos.org/"
[2025-10-12 04:57:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:57:08] 
[2025-10-12 04:57:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:57:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:57:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:57:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:57:08] 
[2025-10-12 04:57:08] 2025-10-12 08:56:12,577 | INFO     | ***************************************
[2025-10-12 04:57:08] 2025-10-12 08:56:13,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 04:57:08] 2025-10-12 08:56:13,213 | INFO     | sufficient remaining disk space (18573426688 B)
[2025-10-12 04:57:08] 2025-10-12 08:56:13,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:57:08] 2025-10-12 08:56:13,214 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:57:08] 2025-10-12 08:56:13,214 | INFO     | update_server=False
[2025-10-12 04:57:08] 2025-10-12 08:56:13,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:57:08] 2025-10-12 08:56:13,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:57:08] 2025-10-12 08:56:13,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:57:08] 2025-10-12 08:56:13,215 | INFO     | aborting loop
[2025-10-12 04:57:08] 2025-10-12 08:56:13,430 | INFO     | all job control threads have been joined
[2025-10-12 04:57:08] 2025-10-12 08:56:13,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:57:08] 2025-10-12 08:56:14,017 | INFO     | all payload control threads have been joined
[2025-10-12 04:57:08] 2025-10-12 08:56:14,216 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,219 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,221 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,247 | INFO     | all data control threads have been joined
[2025-10-12 04:57:08] 2025-10-12 08:56:14,435 | INFO     | [job] control thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,438 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,577 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:14,685 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,023 | INFO     | [payload] control thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,247 | INFO     | [data] control thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,294 | INFO     | [job] validate thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,346 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,488 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,588 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,851 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:15,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:57:08] 2025-10-12 08:56:19,915 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:57:08] 2025-10-12 08:56:44,122 | INFO     | PID=2802 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 04:57:08] 2025-10-12 08:56:44,122 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:57:08] 2025-10-12 08:56:44,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:57:08] 2025-10-12 08:56:44,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:57:08] 2025-10-12 08:57:00,904 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:57:08] 2025-10-12 08:57:03,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279543863104)>', '<ExcThread(monitor, started 140279092848384)>']
[2025-10-12 04:57:08] 2025-10-12 08:57:03,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:57:08] 2025-10-12 08:57:03,216 | INFO     | [monitor] control thread has ended
[2025-10-12 04:57:08] 2025-10-12 08:57:08,031 | INFO     | all workflow threads have been joined
[2025-10-12 04:57:08] 2025-10-12 08:57:08,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:57:08] 2025-10-12 08:57:08,032 | INFO     | traces error code: 0
[2025-10-12 04:57:08] 2025-10-12 08:57:08,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:57:08] 2025-10-12 08:57:08,096 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:57:08] 2025-10-12 08:57:08,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:57:08] 2025-10-12 08:57:08,099 [wrapper] pilotpid: 2802
[2025-10-12 04:57:08] 2025-10-12 08:57:08,101 [wrapper] Pilot exit status: 0
[2025-10-12 04:57:08] 2025-10-12 08:57:08,107 [wrapper] pandaids: 6839242230
[2025-10-12 04:57:08] 2025-10-12 08:57:08,122 [wrapper] cleanup supervisor_pilot  7550 2803
[2025-10-12 04:57:08] 2025-10-12 08:57:08,124 [wrapper] Test setup, not cleaning
[2025-10-12 04:57:08] 2025-10-12 08:57:08,126 [wrapper] apfmon messages muted
[2025-10-12 04:57:08] 2025-10-12 08:57:08,128 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:57:08] 2025-10-12 08:57:08,130 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:57:08]  *** Error codes and diagnostics ***
[2025-10-12 04:57:08]     "exeErrorCode": 0,
[2025-10-12 04:57:08]     "exeErrorDiag": "",
[2025-10-12 04:57:08]     "pilotErrorCode": 0,
[2025-10-12 04:57:08]     "pilotErrorDiag": "",
[2025-10-12 04:57:08]  *** Listing of results directory ***
[2025-10-12 04:57:08] total 418568
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 04:57:08] -rwx------ 1 boincer umatlas     36292 Oct 11 21:47 runpilot2-wrapper.sh
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 21:47 queuedata.json
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:57:08] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:14 run_atlas
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:14 job.xml
[2025-10-12 04:57:08] -rw-r--r-- 2 boincer umatlas 224283924 Oct 12 03:14 EVNT.46676267._003163.pool.root.1
[2025-10-12 04:57:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:14 start_atlas.sh
[2025-10-12 04:57:08] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:14 shared
[2025-10-12 04:57:08] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 03:14 input.tar.gz
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:14 boinc_lockfile
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 03:14 pandaJob.out
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas    975528 Oct 12 03:14 agis_schedconf.cvmfs.json
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas   1560580 Oct 12 03:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:57:08] drwx------ 5 boincer umatlas      4096 Oct 12 03:14 pilot3
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas      6239 Oct 12 04:46 init_data.xml
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas       529 Oct 12 04:55 boinc_task_state.xml
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas 198091267 Oct 12 04:55 HITS.46676269._068889.pool.root.1
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas        95 Oct 12 04:55 pilot_heartbeat.json
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas      1044 Oct 12 04:55 memory_monitor_summary.json
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas    294708 Oct 12 04:56 log.46676269._068889.job.log.tgz.1
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas      7838 Oct 12 04:56 heartbeat.json
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 04:56 boinc_mmap_file
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas        27 Oct 12 04:56 wrapper_checkpoint.txt
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas      4745 Oct 12 04:57 pilotlog.txt
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas    873209 Oct 12 04:57 log.46676269._068889.job.log.1
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas       357 Oct 12 04:57 output.list
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas       620 Oct 12 04:57 runtime_log
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas   1187840 Oct 12 04:57 result.tar.gz
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 04:57 runtime_log.err
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas       656 Oct 12 04:57 6lQKDmCM0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdySMDmbs5qkm.diag
[2025-10-12 04:57:08] -rw-r--r-- 1 boincer umatlas     20811 Oct 12 04:57 stderr.txt
[2025-10-12 04:57:08] HITS file was successfully produced:
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas 198091267 Oct 12 04:55 shared/HITS.pool.root.1
[2025-10-12 04:57:08]  *** Contents of shared directory: ***
[2025-10-12 04:57:08] total 414220
[2025-10-12 04:57:08] -rw-r--r-- 2 boincer umatlas 224283924 Oct 12 03:14 ATLAS.root_0
[2025-10-12 04:57:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:14 start_atlas.sh
[2025-10-12 04:57:08] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 03:14 input.tar.gz
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas 198091267 Oct 12 04:55 HITS.pool.root.1
[2025-10-12 04:57:08] -rw------- 1 boincer umatlas   1187840 Oct 12 04:57 result.tar.gz
04:57:09 (31441): run_atlas exited; CPU time 23471.570446
04:57:09 (31441): called boinc_finish(0)

</stderr_txt>
]]>

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