Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:19:32 (2357469): wrapper (7.7.26015): starting
19:19:32 (2357469): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 19:19:32] Arguments: --nthreads 3
[2025-10-12 19:19:32] Threads: 3
[2025-10-12 19:19:32] Checking for CVMFS
[2025-10-12 19:19:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:19:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:19:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:19:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:19:32] 2.9.2.0 1010855 4511 83528 151629 1 57 24583904 36864001 0 130560 0 3546081 99.991 155986 755 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:19:32] CVMFS is ok
[2025-10-12 19:19:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:19:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:19:32] Further information can be found at the LHC@home message board.
[2025-10-12 19:19:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:19:32] Checking for apptainer binary...
[2025-10-12 19:19:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:19:32] Running /usr/bin/apptainer --version
[2025-10-12 19:19:32] apptainer version 1.4.1-1.1
[2025-10-12 19:19:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:19:32] magicA246b
[2025-10-12 19:19:32] apptainer works
[2025-10-12 19:19:32] Set ATHENA_PROC_NUMBER=3
[2025-10-12 19:19:32] Set ATHENA_CORE_NUMBER=3
[2025-10-12 19:19:32] Starting ATLAS job with PandaID=6839242163
[2025-10-12 19:19:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:44:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:44:50] 2025-10-12 18:43:50,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:44:50] 2025-10-12 18:43:50,301 | INFO     | all job control threads have been joined
[2025-10-12 20:44:50] 2025-10-12 18:43:50,787 | INFO     | all data control threads have been joined
[2025-10-12 20:44:50] 2025-10-12 18:43:51,241 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,242 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,242 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,268 | INFO     | all payload control threads have been joined
[2025-10-12 20:44:50] 2025-10-12 18:43:51,307 | INFO     | [job] control thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,602 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,608 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,647 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:51,792 | INFO     | [data] control thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:52,117 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:52,225 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:52,242 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:52,274 | INFO     | [payload] control thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:52,519 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:52,616 | INFO     | [job] validate thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:43:54,243 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:44:00,687 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:44:50] 2025-10-12 18:44:01,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:44:50] 2025-10-12 18:44:43,976 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:44:50] 2025-10-12 18:44:45,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140283696211776)>', '<ExcThread(monitor, started 140283211667200)>']
[2025-10-12 20:44:50] 2025-10-12 18:44:45,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:44:50] 2025-10-12 18:44:45,526 | INFO     | [monitor] control thread has ended
[2025-10-12 20:44:50] 2025-10-12 18:44:50,538 | INFO     | all workflow threads have been joined
[2025-10-12 20:44:50] 2025-10-12 18:44:50,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:44:50] 2025-10-12 18:44:50,539 | INFO     | traces error code: 0
[2025-10-12 20:44:50] 2025-10-12 18:44:50,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:44:50] 2025-10-12 18:44:50,589 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:44:50] 2025-10-12 18:44:50,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:44:50] 2025-10-12 18:44:50,594 [wrapper] pilotpid: 2361186
[2025-10-12 20:44:50] 2025-10-12 18:44:50,596 [wrapper] Pilot exit status: 0
[2025-10-12 20:44:50] 2025-10-12 18:44:50,603 [wrapper] pandaids: 6839242163
[2025-10-12 20:44:50] 2025-10-12 18:44:50,619 [wrapper] cleanup supervisor_pilot 2379720 2361187
[2025-10-12 20:44:50] 2025-10-12 18:44:50,621 [wrapper] Test setup, not cleaning
[2025-10-12 20:44:50] 2025-10-12 18:44:50,624 [wrapper] apfmon messages muted
[2025-10-12 20:44:50] 2025-10-12 18:44:50,626 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:44:50] 2025-10-12 18:44:50,628 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:44:50]  *** Error codes and diagnostics ***
[2025-10-12 20:44:50]     "exeErrorCode": 0,
[2025-10-12 20:44:50]     "exeErrorDiag": "",
[2025-10-12 20:44:50]     "pilotErrorCode": 0,
[2025-10-12 20:44:50]     "pilotErrorDiag": "",
[2025-10-12 20:44:50]  *** Listing of results directory ***
[2025-10-12 20:44:50] total 416064
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:26 pilot3.tar.gz
[2025-10-12 20:44:50] -rwx------ 1 boinc boinc     36292 Oct 12 03:43 runpilot2-wrapper.sh
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:43 queuedata.json
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:44:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:19 run_atlas
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:19 job.xml
[2025-10-12 20:44:50] -rw-r--r-- 2 boinc boinc 221196056 Oct 12 19:19 EVNT.46676267._003161.pool.root.1
[2025-10-12 20:44:50] -rw-r--r-- 2 boinc boinc    569669 Oct 12 19:19 input.tar.gz
[2025-10-12 20:44:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:19 start_atlas.sh
[2025-10-12 20:44:50] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:19 shared
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:19 boinc_setup_complete
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc      6448 Oct 12 19:19 init_data.xml
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:19 boinc_lockfile
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc      2546 Oct 12 19:19 pandaJob.out
[2025-10-12 20:44:50] -rw------- 1 boinc boinc    975528 Oct 12 19:19 agis_schedconf.cvmfs.json
[2025-10-12 20:44:50] -rw------- 1 boinc boinc   1560580 Oct 12 19:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:44:50] drwx------ 5 boinc boinc      4096 Oct 12 19:19 pilot3
[2025-10-12 20:44:50] -rw------- 1 boinc boinc        95 Oct 12 20:43 pilot_heartbeat.json
[2025-10-12 20:44:50] -rw------- 1 boinc boinc 199007963 Oct 12 20:43 HITS.46676269._068822.pool.root.1
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc       529 Oct 12 20:43 boinc_task_state.xml
[2025-10-12 20:44:50] -rw------- 1 boinc boinc      1018 Oct 12 20:43 memory_monitor_summary.json
[2025-10-12 20:44:50] -rw------- 1 boinc boinc    239132 Oct 12 20:43 log.46676269._068822.job.log.tgz.1
[2025-10-12 20:44:50] -rw------- 1 boinc boinc      7757 Oct 12 20:43 heartbeat.json
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:44 boinc_mmap_file
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:44 wrapper_checkpoint.txt
[2025-10-12 20:44:50] -rw------- 1 boinc boinc      4628 Oct 12 20:44 pilotlog.txt
[2025-10-12 20:44:50] -rw------- 1 boinc boinc    741016 Oct 12 20:44 log.46676269._068822.job.log.1
[2025-10-12 20:44:50] -rw------- 1 boinc boinc       357 Oct 12 20:44 output.list
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:44 runtime_log
[2025-10-12 20:44:50] -rw------- 1 boinc boinc   1003520 Oct 12 20:44 result.tar.gz
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc      8797 Oct 12 20:44 runtime_log.err
[2025-10-12 20:44:50] -rw------- 1 boinc boinc       662 Oct 12 20:44 mXXNDm7H0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyxSMDmRfLbLn.diag
[2025-10-12 20:44:50] -rw-r--r-- 1 boinc boinc      6260 Oct 12 20:44 stderr.txt
[2025-10-12 20:44:50] HITS file was successfully produced:
[2025-10-12 20:44:50] -rw------- 1 boinc boinc 199007963 Oct 12 20:43 shared/HITS.pool.root.1
[2025-10-12 20:44:50]  *** Contents of shared directory: ***
[2025-10-12 20:44:50] total 411916
[2025-10-12 20:44:50] -rw-r--r-- 2 boinc boinc 221196056 Oct 12 19:19 ATLAS.root_0
[2025-10-12 20:44:50] -rw-r--r-- 2 boinc boinc    569669 Oct 12 19:19 input.tar.gz
[2025-10-12 20:44:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:19 start_atlas.sh
[2025-10-12 20:44:50] -rw------- 1 boinc boinc 199007963 Oct 12 20:43 HITS.pool.root.1
[2025-10-12 20:44:50] -rw------- 1 boinc boinc   1003520 Oct 12 20:44 result.tar.gz
20:44:51 (2357469): run_atlas exited; CPU time 14384.771048
20:44:51 (2357469): called boinc_finish(0)

</stderr_txt>
]]>

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