Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:40 (867027): wrapper (7.7.26015): starting
13:41:40 (867027): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 13:41:40] Arguments: --nthreads 4
[2025-10-13 13:41:40] Threads: 4
[2025-10-13 13:41:40] Checking for CVMFS
[2025-10-13 13:41:40] No cvmfs_config command found, will try listing directly
[2025-10-13 13:41:40] CVMFS is ok
[2025-10-13 13:41:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:41:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:41:40] Further information can be found at the LHC@home message board.
[2025-10-13 13:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:41:40] Checking for apptainer binary...
[2025-10-13 13:41:40] which: no apptainer in ((null))
[2025-10-13 13:41:40] apptainer is not installed, using version from CVMFS
[2025-10-13 13:41:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:41:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-13 13:41:40] apptainer works
[2025-10-13 13:41:40] Set ATHENA_PROC_NUMBER=4
[2025-10-13 13:41:40] Set ATHENA_CORE_NUMBER=4
[2025-10-13 13:41:40] Starting ATLAS job with PandaID=6839221344
[2025-10-13 13:41:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:44:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:44:10] 2025-10-13 14:30:09,003 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6839221344/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,004 | INFO     | extracted standard info from prmon json
[2025-10-13 16:44:10] 2025-10-13 14:30:09,004 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:44:10] 2025-10-13 14:30:09,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:44:10] 2025-10-13 14:30:09,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:44:10] 2025-10-13 14:30:09,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:44:10] 2025-10-13 14:30:09,008 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:44:10] 2025-10-13 14:30:09,008 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,009 | INFO     | sum of deviations: 2107748737.9999979
[2025-10-13 16:44:10] 2025-10-13 14:30:09,010 | INFO     | mean x: 1760360739.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,010 | INFO     | mean y: 2358953.084848485
[2025-10-13 16:44:10] 2025-10-13 14:30:09,010 | INFO     | -- intersect: -2661469219.380562
[2025-10-13 16:44:10] 2025-10-13 14:30:09,010 | INFO     | intersect: -2661469219.380562
[2025-10-13 16:44:10] 2025-10-13 14:30:09,010 | INFO     | chi2: 1.415919910621835
[2025-10-13 16:44:10] 2025-10-13 14:30:09,011 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | sum of deviations: 2109442433.499998
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | mean x: 1760360586.5
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | mean y: 2358955.18125
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | -- intersect: -2921442698.678991
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | intersect: -2921442698.678991
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | chi2: 1.4164130447812593
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | current chi2=1.4164130447812593 (change=-0.03482782858867643 %)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,012 | INFO     | right removable region: 159
[2025-10-13 16:44:10] 2025-10-13 14:30:09,013 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | sum of deviations: -18949173986.499992
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | mean x: 1760360891.5
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | mean y: 2384681.43125
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | -- intersect: 26266972403.940487
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | intersect: 26266972403.940487
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | chi2: 0.08517732455235841
[2025-10-13 16:44:10] 2025-10-13 14:30:09,014 | INFO     | current chi2=0.08517732455235841 (change=93.98431197178725 %)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,015 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | sum of deviations: -16517111703.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | mean x: 1760361044.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | mean y: 2381450.858064516
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | -- intersect: 25183812880.485294
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | intersect: 25183812880.485294
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | chi2: 0.08348758476332471
[2025-10-13 16:44:10] 2025-10-13 14:30:09,016 | INFO     | current chi2=0.08348758476332471 (change=1.9837906366676428 %)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,017 | INFO     | left removable region: 20
[2025-10-13 16:44:10] 2025-10-13 14:30:09,017 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | sum of deviations: -9191928228.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | mean x: 1760361166.0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | mean y: 2371793.3741007196
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | -- intersect: 19433949232.903385
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | intersect: 19433949232.903385
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | chi2: 0.0668613733425725
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | -- intersect: 19433949232.903385
[2025-10-13 16:44:10] 2025-10-13 14:30:09,018 | INFO     | current memory leak: -11.04 B/s (using 139 data points, chi2=0.07)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | could have reported an average CPU frequency of 2635 MHz (9 samples)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | ..............................
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | . Timing measurements:
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | . get job = 0 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | . initial setup = 1 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | . payload setup = 5 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,019 | INFO     | . stage-in = 0 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,020 | INFO     | . payload execution = 10059 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,020 | INFO     | . stage-out = 0 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,020 | INFO     | . log creation = 0 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,020 | INFO     | ..............................
[2025-10-13 16:44:10] 2025-10-13 14:30:09,131 | INFO     | 
[2025-10-13 16:44:10] 2025-10-13 14:30:09,131 | INFO     | job summary report
[2025-10-13 16:44:10] 2025-10-13 14:30:09,131 | INFO     | --------------------------------------------------
[2025-10-13 16:44:10] 2025-10-13 14:30:09,131 | INFO     | PanDA job id: 6839221344
[2025-10-13 16:44:10] 2025-10-13 14:30:09,131 | INFO     | task id: 46676269
[2025-10-13 16:44:10] 2025-10-13 14:30:09,131 | INFO     | errors: (none)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:44:10] 2025-10-13 14:30:09,132 | INFO     | pilot state: finished 
[2025-10-13 16:44:10] 2025-10-13 14:30:09,132 | INFO     | transexitcode: 0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,132 | INFO     | exeerrorcode: 0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,132 | INFO     | exeerrordiag: 
[2025-10-13 16:44:10] 2025-10-13 14:30:09,132 | INFO     | exitcode: 0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,133 | INFO     | exitmsg: OK
[2025-10-13 16:44:10] 2025-10-13 14:30:09,133 | INFO     | cpuconsumptiontime: 38710 s
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | nevents: 400
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | neventsw: 0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | pid: 878146
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | pgrp: 878146
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | corecount: 4
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | event service: False
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | sizes: {0: 2348695, 1: 2348894, 5: 2349156, 12: 2349212, 10069: 2377876, 10071: 2386896, 10073: 2387080, 10082: 2387338}
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | --------------------------------------------------
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | 
[2025-10-13 16:44:10] 2025-10-13 14:30:09,134 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-10-13 16:44:10] 2025-10-13 14:30:09,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:44:10] 2025-10-13 14:30:09,157 | INFO     | job 6839221344 has completed (purged errors)
[2025-10-13 16:44:10] 2025-10-13 14:30:09,157 | INFO     | overall cleanup function is called
[2025-10-13 16:44:10] 2025-10-13 14:30:09,671 | INFO     | PID=870782 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:44:10] 2025-10-13 14:30:09,671 | INFO     | .. there are 4 such processes running
[2025-10-13 16:44:10] 2025-10-13 14:30:10,164 | INFO     | --- collectZombieJob: --- 10, [878146]
[2025-10-13 16:44:10] 2025-10-13 14:30:10,164 | INFO     | zombie collector waiting for pid 878146
[2025-10-13 16:44:10] 2025-10-13 14:30:10,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:44:10] 2025-10-13 14:30:10,165 | INFO     | collected zombie processes
[2025-10-13 16:44:10] 2025-10-13 14:30:10,165 | INFO     | will attempt to kill all subprocesses of pid=878146
[2025-10-13 16:44:10] 2025-10-13 14:30:10,559 | INFO     | process IDs to be killed: [878146] (in reverse order)
[2025-10-13 16:44:10] 2025-10-13 14:30:10,672 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:44:10] 2025-10-13 14:30:10,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:44:10] 2025-10-13 14:30:10,685 | INFO     | did not find any defunct processes belonging to 878146
[2025-10-13 16:44:10] 2025-10-13 14:30:10,697 | INFO     | did not find any defunct processes belonging to 878146
[2025-10-13 16:44:10] 2025-10-13 14:30:10,697 | INFO     | ready for new job
[2025-10-13 16:44:10] 2025-10-13 14:30:10,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:44:10] 2025-10-13 14:30:10,700 | INFO     | ***************************************
[2025-10-13 16:44:10] 2025-10-13 14:30:10,700 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:44:10] 2025-10-13 14:30:10,700 | INFO     | ***************************************
[2025-10-13 16:44:10] 2025-10-13 14:30:10,700 | INFO     | 
[2025-10-13 16:44:10] 2025-10-13 14:30:10,705 | INFO     | architecture information:
[2025-10-13 16:44:10] 2025-10-13 14:30:10,705 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:44:10] 2025-10-13 14:30:10,721 | INFO     | cat /etc/os-release:
[2025-10-13 16:44:10] NAME="CentOS Linux"
[2025-10-13 16:44:10] VERSION="7 (Core)"
[2025-10-13 16:44:10] ID="centos"
[2025-10-13 16:44:10] ID_LIKE="rhel fedora"
[2025-10-13 16:44:10] VERSION_ID="7"
[2025-10-13 16:44:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:44:10] ANSI_COLOR="0;31"
[2025-10-13 16:44:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:44:10] HOME_URL="https://www.centos.org/"
[2025-10-13 16:44:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:44:10] 
[2025-10-13 16:44:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:44:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:44:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:44:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:44:10] 
[2025-10-13 16:44:10] 2025-10-13 14:30:10,722 | INFO     | ***************************************
[2025-10-13 16:44:10] 2025-10-13 14:30:11,225 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-10-13 16:44:10] 2025-10-13 14:30:11,241 | INFO     | sufficient remaining disk space (693148581888 B)
[2025-10-13 16:44:10] 2025-10-13 14:30:11,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:44:10] 2025-10-13 14:30:11,241 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:44:10] 2025-10-13 14:30:11,241 | INFO     | update_server=False
[2025-10-13 16:44:10] 2025-10-13 14:30:11,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:44:10] 2025-10-13 14:30:11,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:44:10] 2025-10-13 14:30:11,570 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 16:44:10] 2025-10-13 14:30:11,571 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 16:44:10] 2025-10-13 14:30:11,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:44:10] 2025-10-13 14:30:11,571 | INFO     | will abort loop
[2025-10-13 16:44:10] 2025-10-13 14:30:11,870 | INFO     | all payload control threads have been joined
[2025-10-13 16:44:10] 2025-10-13 14:30:12,180 | INFO     | all data control threads have been joined
[2025-10-13 16:44:10] 2025-10-13 14:30:12,246 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:12,537 | INFO     | all job control threads have been joined
[2025-10-13 16:44:10] 2025-10-13 14:30:12,575 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:12,807 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:12,832 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:12,839 | INFO     | [job] validate thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:12,875 | INFO     | [payload] control thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,173 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,185 | INFO     | [data] control thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,218 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,227 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,235 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,246 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:13,542 | INFO     | [job] control thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:14,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:44:10] 2025-10-13 14:30:14,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:44:10] 2025-10-13 14:30:15,137 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:18,624 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:21,522 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:44:10] 2025-10-13 14:30:22,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:44:10] 2025-10-13 14:30:42,239 | INFO     | PID=870782 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 16:44:10] 2025-10-13 14:30:42,239 | INFO     | .. there are 4 such processes running
[2025-10-13 16:44:10] 2025-10-13 14:30:42,240 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:44:10] 2025-10-13 14:30:42,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:44:10] 2025-10-13 14:30:42,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:44:10] 2025-10-13 14:31:06,618 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:44:10] 2025-10-13 14:31:08,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22374880732992)>', '<ExcThread(monitor, started 22374640482048)>']
[2025-10-13 16:44:10] 2025-10-13 14:31:09,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:44:10] 2025-10-13 14:31:09,353 | INFO     | [monitor] control thread has ended
[2025-10-13 16:44:10] 2025-10-13 14:31:13,508 | INFO     | all workflow threads have been joined
[2025-10-13 16:44:10] 2025-10-13 14:31:13,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:44:10] 2025-10-13 14:31:13,509 | INFO     | traces error code: 0
[2025-10-13 16:44:10] 2025-10-13 14:31:13,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:44:10] 2025-10-13 14:31:13,645 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:44:10] 2025-10-13 14:31:13,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:44:10] 2025-10-13 14:31:13,651 [wrapper] pilotpid: 870782
[2025-10-13 16:44:10] 2025-10-13 14:31:13,654 [wrapper] Pilot exit status: 0
[2025-10-13 16:44:10] 2025-10-13 14:31:13,663 [wrapper] pandaids: 6839221344
[2025-10-13 16:44:10] 2025-10-13 14:31:13,735 [wrapper] cleanup supervisor_pilot 1092343 870783
[2025-10-13 16:44:10] 2025-10-13 14:31:13,738 [wrapper] Test setup, not cleaning
[2025-10-13 16:44:10] 2025-10-13 14:31:13,741 [wrapper] apfmon messages muted
[2025-10-13 16:44:10] 2025-10-13 14:31:13,744 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:44:10] 2025-10-13 14:31:13,747 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:44:10]  *** Error codes and diagnostics ***
[2025-10-13 16:44:10]     "exeErrorCode": 0,
[2025-10-13 16:44:10]     "exeErrorDiag": "",
[2025-10-13 16:44:10]     "pilotErrorCode": 0,
[2025-10-13 16:44:10]     "pilotErrorDiag": "",
[2025-10-13 16:44:10]  *** Listing of results directory ***
[2025-10-13 16:44:10] total 411752
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:26 pilot3.tar.gz
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:30 queuedata.json
[2025-10-13 16:44:10] -rwx------ 1 boinc boinc     36292 Oct 12 03:30 runpilot2-wrapper.sh
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:44:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:41 run_atlas
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:41 job.xml
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc      6635 Oct 13 13:41 init_data.xml
[2025-10-13 16:44:10] -rw-r--r-- 2 boinc boinc 220452116 Oct 13 13:41 EVNT.46676267._003145.pool.root.1
[2025-10-13 16:44:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:41 start_atlas.sh
[2025-10-13 16:44:10] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:41 shared
[2025-10-13 16:44:10] -rw-r--r-- 2 boinc boinc    569677 Oct 13 13:41 input.tar.gz
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:41 boinc_lockfile
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc      2549 Oct 13 13:41 pandaJob.out
[2025-10-13 16:44:10] -rw------- 1 boinc boinc    972497 Oct 13 13:41 agis_schedconf.cvmfs.json
[2025-10-13 16:44:10] -rw------- 1 boinc boinc   1560580 Oct 13 13:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:44:10] drwx------ 5 boinc boinc      4096 Oct 13 13:41 pilot3
[2025-10-13 16:44:10] -rw------- 1 boinc boinc 193736670 Oct 13 16:29 HITS.46676269._068429.pool.root.1
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc       527 Oct 13 16:29 boinc_task_state.xml
[2025-10-13 16:44:10] -rw------- 1 boinc boinc      1034 Oct 13 16:29 memory_monitor_summary.json
[2025-10-13 16:44:10] -rw------- 1 boinc boinc    333835 Oct 13 16:29 log.46676269._068429.job.log.tgz.1
[2025-10-13 16:44:10] -rw------- 1 boinc boinc      7828 Oct 13 16:30 heartbeat.json
[2025-10-13 16:44:10] -rw------- 1 boinc boinc        95 Oct 13 16:30 pilot_heartbeat.json
[2025-10-13 16:44:10] -rw------- 1 boinc boinc      5090 Oct 13 16:31 pilotlog.txt
[2025-10-13 16:44:10] -rw------- 1 boinc boinc   1435833 Oct 13 16:31 log.46676269._068429.job.log.1
[2025-10-13 16:44:10] -rw------- 1 boinc boinc       357 Oct 13 16:31 output.list
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:31 runtime_log
[2025-10-13 16:44:10] -rw------- 1 boinc boinc   1792000 Oct 13 16:31 result.tar.gz
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc      9070 Oct 13 16:31 runtime_log.err
[2025-10-13 16:44:10] -rw------- 1 boinc boinc       664 Oct 13 16:31 5QTLDmA6zR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7vSMDmiq7pwm.diag
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc        27 Oct 13 16:43 wrapper_checkpoint.txt
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:44 boinc_mmap_file
[2025-10-13 16:44:10] -rw-r--r-- 1 boinc boinc     20943 Oct 13 16:44 stderr.txt
[2025-10-13 16:44:10] HITS file was successfully produced:
[2025-10-13 16:44:10] -rw------- 1 boinc boinc 193736670 Oct 13 16:29 shared/HITS.pool.root.1
[2025-10-13 16:44:10]  *** Contents of shared directory: ***
[2025-10-13 16:44:10] total 406820
[2025-10-13 16:44:10] -rw-r--r-- 2 boinc boinc 220452116 Oct 13 13:41 ATLAS.root_0
[2025-10-13 16:44:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:41 start_atlas.sh
[2025-10-13 16:44:10] -rw-r--r-- 2 boinc boinc    569677 Oct 13 13:41 input.tar.gz
[2025-10-13 16:44:10] -rw------- 1 boinc boinc 193736670 Oct 13 16:29 HITS.pool.root.1
[2025-10-13 16:44:10] -rw------- 1 boinc boinc   1792000 Oct 13 16:31 result.tar.gz
16:44:12 (867027): run_atlas exited; CPU time 39140.488492
16:44:12 (867027): called boinc_finish(0)

</stderr_txt>
]]>

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