Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:19:41 (17475): wrapper (7.7.26015): starting
03:19:41 (17475): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:19:41] Arguments: --nthreads 12
[2025-10-12 03:19:41] Threads: 12
[2025-10-12 03:19:41] Checking for CVMFS
[2025-10-12 03:19:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:19:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:19:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:19:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:19:41] 2.11.2.0 3035 222527 97032 151612 3 56 14692512 20275201 1 130560 3 107844444 99.984 13642140 12608 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 03:19:41] CVMFS is ok
[2025-10-12 03:19:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:19:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:19:41] Further information can be found at the LHC@home message board.
[2025-10-12 03:19:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:19:41] Checking for apptainer binary...
[2025-10-12 03:19:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:19:41] Running /usr/bin/apptainer --version
[2025-10-12 03:19:41] apptainer version 1.3.2-1.el7
[2025-10-12 03:19:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:19:42] c-205-31.aglt2.org
[2025-10-12 03:19:42] apptainer works
[2025-10-12 03:19:42] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:19:42] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:19:42] Starting ATLAS job with PandaID=6839221592
[2025-10-12 03:19:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:33:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:33:11]  storage_token=
[2025-10-12 04:33:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839221592/log.46676269._068604.job.log.tgz.1
[2025-10-12 04:33:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/6b/log.46676269._068604.job.log.tgz.1
[2025-10-12 04:33:11]  workdir=None
[2025-10-12 04:33:11] ]
[2025-10-12 04:33:11] 2025-10-12 08:32:17,194 | INFO     | transferring file log.46676269._068604.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839221592/log.46676269._068604.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 04:33:11] 2025-10-12 08:32:17,194 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839221592/log.46676269._068604.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._068604.job
[2025-10-12 04:33:11] 2025-10-12 08:32:17,221 | INFO     | adding to output.list: log.46676269._068604.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/6b/log.46676269._068604.job.log.tg
[2025-10-12 04:33:11] 2025-10-12 08:32:17,222 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 04:33:11] 2025-10-12 08:32:17,222 | INFO     | summary of transferred files:
[2025-10-12 04:33:11] 2025-10-12 08:32:17,222 | INFO     |  -- lfn=log.46676269._068604.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 04:33:11] 2025-10-12 08:32:17,222 | INFO     | stage-out finished correctly
[2025-10-12 04:33:11] 2025-10-12 08:32:17,391 | INFO     | monitor loop #323: job 0:6839221592 is in state 'finished'
[2025-10-12 04:33:11] 2025-10-12 08:32:17,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 04:33:11] 2025-10-12 08:32:18,257 | INFO     | time since job start (4340s) is within the limit (172800.0s)
[2025-10-12 04:33:11] 2025-10-12 08:32:18,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 04:33:11] 2025-10-12 08:32:19,895 | INFO     | monitor loop #324: job 0:6839221592 is in state 'finished'
[2025-10-12 04:33:11] 2025-10-12 08:32:19,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 04:33:11] 2025-10-12 08:32:20,262 | INFO     | time since job start (4342s) is within the limit (172800.0s)
[2025-10-12 04:33:11] 2025-10-12 08:32:20,291 | INFO     | job 6839221592 has state=finished
[2025-10-12 04:33:11] 2025-10-12 08:32:20,291 | INFO     | preparing for final server update for job 6839221592 in state='finished'
[2025-10-12 04:33:11] 2025-10-12 08:32:20,291 | INFO     | this job has now completed (state=finished)
[2025-10-12 04:33:11] 2025-10-12 08:32:20,292 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 04:33:11] 2025-10-12 08:32:20,292 | INFO     | log transfer has been attempted: DONE
[2025-10-12 04:33:11] 2025-10-12 08:32:20,292 | INFO     | job 6839221592 has finished - writing final server update
[2025-10-12 04:33:11] 2025-10-12 08:32:20,292 | INFO     | total number of processed events: 400 (read)
[2025-10-12 04:33:11] 2025-10-12 08:32:20,295 | INFO     | executing command: lscpu
[2025-10-12 04:33:11] 2025-10-12 08:32:20,327 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 04:33:11] 2025-10-12 08:32:22,267 | INFO     | time since job start (4344s) is within the limit (172800.0s)
[2025-10-12 04:33:11] 2025-10-12 08:32:22,398 | INFO     | monitor loop #325: job 0:6839221592 is in state 'finished'
[2025-10-12 04:33:11] 2025-10-12 08:32:22,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 04:33:11] 2025-10-12 08:32:24,273 | INFO     | time since job start (4346s) is within the limit (172800.0s)
[2025-10-12 04:33:11] 2025-10-12 08:32:24,899 | INFO     | monitor loop #326: job 0:6839221592 is in state 'finished'
[2025-10-12 04:33:11] 2025-10-12 08:32:24,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,105 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 04:33:11] 2025-10-12 08:32:25,108 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,111 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839221592/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,112 | INFO     | extracted standard info from prmon json
[2025-10-12 04:33:11] 2025-10-12 08:32:25,112 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:33:11] 2025-10-12 08:32:25,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:33:11] 2025-10-12 08:32:25,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:33:11] 2025-10-12 08:32:25,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:33:11] 2025-10-12 08:32:25,115 | INFO     | fitting pss+swap vs Time
[2025-10-12 04:33:11] 2025-10-12 08:32:25,115 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,115 | INFO     | sum of deviations: -3933689645.5
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | mean x: 1760255853.5
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | mean y: 2910085.859375
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | -- intersect: 85207616769.23788
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | intersect: 85207616769.23788
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | chi2: 0.06516370589937841
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | -- intersect: 85207616769.23788
[2025-10-12 04:33:11] 2025-10-12 08:32:25,116 | INFO     | current memory leak: -48.40 B/s (using 64 data points, chi2=0.07)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | ..............................
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | . Timing measurements:
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | . get job = 0 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | . initial setup = 2 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | . payload setup = 7 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | . stage-in = 0 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,117 | INFO     | . payload execution = 4311 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,118 | INFO     | . stage-out = 0 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,118 | INFO     | . log creation = 0 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,118 | INFO     | ..............................
[2025-10-12 04:33:11] 2025-10-12 08:32:25,200 | INFO     | 
[2025-10-12 04:33:11] 2025-10-12 08:32:25,200 | INFO     | job summary report
[2025-10-12 04:33:11] 2025-10-12 08:32:25,200 | INFO     | --------------------------------------------------
[2025-10-12 04:33:11] 2025-10-12 08:32:25,200 | INFO     | PanDA job id: 6839221592
[2025-10-12 04:33:11] 2025-10-12 08:32:25,200 | INFO     | task id: 46676269
[2025-10-12 04:33:11] 2025-10-12 08:32:25,201 | INFO     | errors: (none)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:33:11] 2025-10-12 08:32:25,201 | INFO     | pilot state: finished 
[2025-10-12 04:33:11] 2025-10-12 08:32:25,201 | INFO     | transexitcode: 0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,201 | INFO     | exeerrorcode: 0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,201 | INFO     | exeerrordiag: 
[2025-10-12 04:33:11] 2025-10-12 08:32:25,202 | INFO     | exitcode: 0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,202 | INFO     | exitmsg: OK
[2025-10-12 04:33:11] 2025-10-12 08:32:25,202 | INFO     | cpuconsumptiontime: 46884 s
[2025-10-12 04:33:11] 2025-10-12 08:32:25,202 | INFO     | nevents: 400
[2025-10-12 04:33:11] 2025-10-12 08:32:25,202 | INFO     | neventsw: 0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,202 | INFO     | pid: 28736
[2025-10-12 04:33:11] 2025-10-12 08:32:25,203 | INFO     | pgrp: 28736
[2025-10-12 04:33:11] 2025-10-12 08:32:25,203 | INFO     | corecount: 12
[2025-10-12 04:33:11] 2025-10-12 08:32:25,203 | INFO     | event service: False
[2025-10-12 04:33:11] 2025-10-12 08:32:25,203 | INFO     | sizes: {0: 2348684, 1: 2348883, 5: 2349145, 11: 2349201, 4322: 2375222, 4323: 2384403, 4325: 2384403, 4331: 2384597}
[2025-10-12 04:33:11] 2025-10-12 08:32:25,203 | INFO     | --------------------------------------------------
[2025-10-12 04:33:11] 2025-10-12 08:32:25,203 | INFO     | 
[2025-10-12 04:33:11] 2025-10-12 08:32:25,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 04:33:11] 2025-10-12 08:32:25,226 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,229 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,229 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:33:11] 2025-10-12 08:32:25,230 | INFO     | job 6839221592 has completed (purged errors)
[2025-10-12 04:33:11] 2025-10-12 08:32:25,230 | INFO     | overall cleanup function is called
[2025-10-12 04:33:11] 2025-10-12 08:32:26,238 | INFO     | --- collectZombieJob: --- 10, [28736]
[2025-10-12 04:33:11] 2025-10-12 08:32:26,238 | INFO     | zombie collector waiting for pid 28736
[2025-10-12 04:33:11] 2025-10-12 08:32:26,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:33:11] 2025-10-12 08:32:26,248 | INFO     | collected zombie processes
[2025-10-12 04:33:11] 2025-10-12 08:32:26,248 | INFO     | will attempt to kill all subprocesses of pid=28736
[2025-10-12 04:33:11] 2025-10-12 08:32:26,339 | INFO     | process IDs to be killed: [28736] (in reverse order)
[2025-10-12 04:33:11] 2025-10-12 08:32:26,390 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:33:11] 2025-10-12 08:32:26,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:33:11] 2025-10-12 08:32:26,395 | INFO     | did not find any defunct processes belonging to 28736
[2025-10-12 04:33:11] 2025-10-12 08:32:26,397 | INFO     | did not find any defunct processes belonging to 28736
[2025-10-12 04:33:11] 2025-10-12 08:32:26,397 | INFO     | ready for new job
[2025-10-12 04:33:11] 2025-10-12 08:32:26,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:33:11] 2025-10-12 08:32:26,399 | INFO     | ***************************************
[2025-10-12 04:33:11] 2025-10-12 08:32:26,399 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:33:11] 2025-10-12 08:32:26,399 | INFO     | ***************************************
[2025-10-12 04:33:11] 2025-10-12 08:32:26,399 | INFO     | 
[2025-10-12 04:33:11] 2025-10-12 08:32:26,400 | INFO     | architecture information:
[2025-10-12 04:33:11] 2025-10-12 08:32:26,400 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:33:11] 2025-10-12 08:32:26,417 | INFO     | cat /etc/os-release:
[2025-10-12 04:33:11] NAME="CentOS Linux"
[2025-10-12 04:33:11] VERSION="7 (Core)"
[2025-10-12 04:33:11] ID="centos"
[2025-10-12 04:33:11] ID_LIKE="rhel fedora"
[2025-10-12 04:33:11] VERSION_ID="7"
[2025-10-12 04:33:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:33:11] ANSI_COLOR="0;31"
[2025-10-12 04:33:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:33:11] HOME_URL="https://www.centos.org/"
[2025-10-12 04:33:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:33:11] 
[2025-10-12 04:33:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:33:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:33:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:33:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:33:11] 
[2025-10-12 04:33:11] 2025-10-12 08:32:26,417 | INFO     | ***************************************
[2025-10-12 04:33:11] 2025-10-12 08:32:26,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 04:33:11] 2025-10-12 08:32:26,937 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-12 04:33:11] 2025-10-12 08:32:26,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:33:11] 2025-10-12 08:32:26,938 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:33:11] 2025-10-12 08:32:26,938 | INFO     | update_server=False
[2025-10-12 04:33:11] 2025-10-12 08:32:26,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:33:11] 2025-10-12 08:32:26,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:33:11] 2025-10-12 08:32:27,095 | INFO     | all data control threads have been joined
[2025-10-12 04:33:11] 2025-10-12 08:32:27,196 | INFO     | all job control threads have been joined
[2025-10-12 04:33:11] 2025-10-12 08:32:27,402 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 04:33:11] 2025-10-12 08:32:27,402 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 04:33:11] 2025-10-12 08:32:27,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:33:11] 2025-10-12 08:32:27,403 | INFO     | will abort loop
[2025-10-12 04:33:11] 2025-10-12 08:32:27,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:33:11] 2025-10-12 08:32:27,944 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:27,944 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,101 | INFO     | [data] control thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,121 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,202 | INFO     | [job] control thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,255 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,344 | INFO     | all payload control threads have been joined
[2025-10-12 04:33:11] 2025-10-12 08:32:28,408 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,692 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,917 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:28,954 | INFO     | [job] validate thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:29,174 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:29,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:33:11] 2025-10-12 08:32:29,349 | INFO     | [payload] control thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:29,390 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:29,823 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:33,217 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:37,526 | INFO     | job.realtimelogging is not enabled
[2025-10-12 04:33:11] 2025-10-12 08:32:38,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:33:11] 2025-10-12 08:32:57,472 | INFO     | PID=21145 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 04:33:11] 2025-10-12 08:32:57,472 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:33:11] 2025-10-12 08:32:57,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:33:11] 2025-10-12 08:32:57,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:33:11] 2025-10-12 08:33:04,498 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:33:11] 2025-10-12 08:33:06,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884558165824)>', '<ExcThread(monitor, started 139883947464448)>']
[2025-10-12 04:33:11] 2025-10-12 08:33:06,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:33:11] 2025-10-12 08:33:06,505 | INFO     | [monitor] control thread has ended
[2025-10-12 04:33:11] 2025-10-12 08:33:11,269 | INFO     | all workflow threads have been joined
[2025-10-12 04:33:11] 2025-10-12 08:33:11,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:33:11] 2025-10-12 08:33:11,269 | INFO     | traces error code: 0
[2025-10-12 04:33:11] 2025-10-12 08:33:11,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:33:11] 2025-10-12 08:33:11,350 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:33:11] 2025-10-12 08:33:11,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:33:11] 2025-10-12 08:33:11,358 [wrapper] pilotpid: 21145
[2025-10-12 04:33:11] 2025-10-12 08:33:11,362 [wrapper] Pilot exit status: 0
[2025-10-12 04:33:11] 2025-10-12 08:33:11,378 [wrapper] pandaids: 6839221592
[2025-10-12 04:33:11] 2025-10-12 08:33:11,420 [wrapper] cleanup supervisor_pilot  7521 21146
[2025-10-12 04:33:11] 2025-10-12 08:33:11,424 [wrapper] Test setup, not cleaning
[2025-10-12 04:33:11] 2025-10-12 08:33:11,428 [wrapper] apfmon messages muted
[2025-10-12 04:33:11] 2025-10-12 08:33:11,432 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:33:11] 2025-10-12 08:33:11,435 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:33:11]  *** Error codes and diagnostics ***
[2025-10-12 04:33:11]     "exeErrorCode": 0,
[2025-10-12 04:33:11]     "exeErrorDiag": "",
[2025-10-12 04:33:11]     "pilotErrorCode": 0,
[2025-10-12 04:33:11]     "pilotErrorDiag": "",
[2025-10-12 04:33:11]  *** Listing of results directory ***
[2025-10-12 04:33:11] total 410864
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 04:33:11] -rwx------ 1 boincer umatlas     36292 Oct 11 21:35 runpilot2-wrapper.sh
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 21:35 queuedata.json
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas       100 Oct 12 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:33:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 03:19 run_atlas
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas       105 Oct 12 03:19 job.xml
[2025-10-12 04:33:11] -rw-r--r-- 2 boincer umatlas 219569527 Oct 12 03:19 EVNT.46676267._003153.pool.root.1
[2025-10-12 04:33:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:19 start_atlas.sh
[2025-10-12 04:33:11] drwxrwx--x 2 boincer umatlas      4096 Oct 12 03:19 shared
[2025-10-12 04:33:11] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 03:19 input.tar.gz
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas         0 Oct 12 03:19 boinc_lockfile
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 03:19 pandaJob.out
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas    975520 Oct 12 03:19 agis_schedconf.cvmfs.json
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas   1560580 Oct 12 03:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:33:11] drwx------ 5 boincer umatlas      4096 Oct 12 03:19 pilot3
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 04:28 init_data.xml
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas 195248760 Oct 12 04:31 HITS.46676269._068604.pool.root.1
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas      1049 Oct 12 04:32 memory_monitor_summary.json
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas       529 Oct 12 04:32 boinc_task_state.xml
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas    368625 Oct 12 04:32 log.46676269._068604.job.log.tgz.1
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas      7849 Oct 12 04:32 heartbeat.json
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas        95 Oct 12 04:32 pilot_heartbeat.json
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas        27 Oct 12 04:33 wrapper_checkpoint.txt
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 04:33 boinc_mmap_file
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas      5004 Oct 12 04:33 pilotlog.txt
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas    631801 Oct 12 04:33 log.46676269._068604.job.log.1
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas       357 Oct 12 04:33 output.list
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas       620 Oct 12 04:33 runtime_log
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas   1024000 Oct 12 04:33 result.tar.gz
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 04:33 runtime_log.err
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas       659 Oct 12 04:33 IrONDm1A0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpwSMDm49upQn.diag
[2025-10-12 04:33:11] -rw-r--r-- 1 boincer umatlas     22146 Oct 12 04:33 stderr.txt
[2025-10-12 04:33:11] HITS file was successfully produced:
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas 195248760 Oct 12 04:31 shared/HITS.pool.root.1
[2025-10-12 04:33:11]  *** Contents of shared directory: ***
[2025-10-12 04:33:11] total 406680
[2025-10-12 04:33:11] -rw-r--r-- 2 boincer umatlas 219569527 Oct 12 03:19 ATLAS.root_0
[2025-10-12 04:33:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 03:19 start_atlas.sh
[2025-10-12 04:33:11] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 03:19 input.tar.gz
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas 195248760 Oct 12 04:31 HITS.pool.root.1
[2025-10-12 04:33:11] -rw------- 1 boincer umatlas   1024000 Oct 12 04:33 result.tar.gz
04:33:13 (17475): run_atlas exited; CPU time 46860.077177
04:33:13 (17475): called boinc_finish(0)

</stderr_txt>
]]>

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