Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:49:48 (3501822): wrapper (7.7.26015): starting
17:49:48 (3501822): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 17:49:48] Arguments: --nthreads 4
[2025-10-13 17:49:48] Threads: 4
[2025-10-13 17:49:48] Checking for CVMFS
[2025-10-13 17:49:48] No cvmfs_config command found, will try listing directly
[2025-10-13 17:49:48] CVMFS is ok
[2025-10-13 17:49:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:49:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:49:48] Further information can be found at the LHC@home message board.
[2025-10-13 17:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:49:48] Checking for apptainer binary...
[2025-10-13 17:49:48] which: no apptainer in ((null))
[2025-10-13 17:49:48] apptainer is not installed, using version from CVMFS
[2025-10-13 17:49:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:49:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 17:49:48] apptainer works
[2025-10-13 17:49:48] Set ATHENA_PROC_NUMBER=4
[2025-10-13 17:49:48] Set ATHENA_CORE_NUMBER=4
[2025-10-13 17:49:48] Starting ATLAS job with PandaID=6839221644
[2025-10-13 17:49:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:58:41 (3672621): wrapper (7.7.26015): starting
18:58:41 (3672621): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:58:41] Arguments: --nthreads 4
[2025-10-13 18:58:41] Threads: 4
[2025-10-13 18:58:41] This job has been restarted, cleaning up previous attempt
[2025-10-13 18:58:41] Checking for CVMFS
[2025-10-13 18:58:41] No cvmfs_config command found, will try listing directly
[2025-10-13 18:58:41] CVMFS is ok
[2025-10-13 18:58:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:58:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:58:41] Further information can be found at the LHC@home message board.
[2025-10-13 18:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:58:41] Checking for apptainer binary...
[2025-10-13 18:58:41] which: no apptainer in ((null))
[2025-10-13 18:58:41] apptainer is not installed, using version from CVMFS
[2025-10-13 18:58:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:58:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 18:58:41] apptainer works
[2025-10-13 18:58:41] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:58:41] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:58:41] Starting ATLAS job with PandaID=6839221644
[2025-10-13 18:58:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:47:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:47:11] 2025-10-13 19:32:55,394 | INFO     | intersect: -29619323986.207436
[2025-10-13 21:47:11] 2025-10-13 19:32:55,394 | INFO     | chi2: 1.1504256318318657
[2025-10-13 21:47:11] 2025-10-13 19:32:55,394 | INFO     | sum of square deviations: 964976232.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,395 | INFO     | sum of deviations: 17260212330.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | mean x: 1760379190.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | mean y: 2303335.4178082193
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | -- intersect: -31485019965.28712
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | intersect: -31485019965.28712
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | chi2: 1.1513054913142673
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | current chi2=1.1513054913142673 (change=-0.07648121339234357 %)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,396 | INFO     | right removable region: 145
[2025-10-13 21:47:11] 2025-10-13 19:32:55,397 | INFO     | sum of square deviations: 964976232.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | sum of deviations: 1641126340.500001
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | mean x: 1760379495.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | mean y: 2328194.815068493
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | -- intersect: -2991533272.4839745
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | intersect: -2991533272.4839745
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | chi2: 0.0019704281753710577
[2025-10-13 21:47:11] 2025-10-13 19:32:55,398 | INFO     | current chi2=0.0019704281753710577 (change=99.8287218120972 %)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,399 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,399 | INFO     | sum of deviations: 2071371021.9999998
[2025-10-13 21:47:11] 2025-10-13 19:32:55,399 | INFO     | mean x: 1760379648.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,400 | INFO     | mean y: 2327513.723404255
[2025-10-13 21:47:11] 2025-10-13 19:32:55,400 | INFO     | -- intersect: -4192849771.8196754
[2025-10-13 21:47:11] 2025-10-13 19:32:55,400 | INFO     | intersect: -4192849771.8196754
[2025-10-13 21:47:11] 2025-10-13 19:32:55,400 | INFO     | chi2: 0.0010521477277257568
[2025-10-13 21:47:11] 2025-10-13 19:32:55,400 | INFO     | current chi2=0.0010521477277257568 (change=46.60309160836966 %)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,400 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,401 | INFO     | sum of deviations: 2325788693.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,401 | INFO     | mean x: 1760379800.5
[2025-10-13 21:47:11] 2025-10-13 19:32:55,401 | INFO     | mean y: 2327086.007352941
[2025-10-13 21:47:11] 2025-10-13 19:32:55,402 | INFO     | -- intersect: -5247016063.624723
[2025-10-13 21:47:11] 2025-10-13 19:32:55,402 | INFO     | intersect: -5247016063.624723
[2025-10-13 21:47:11] 2025-10-13 19:32:55,402 | INFO     | chi2: 0.00029064906305855374
[2025-10-13 21:47:11] 2025-10-13 19:32:55,402 | INFO     | current chi2=0.00029064906305855374 (change=72.37564123368885 %)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,402 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,403 | INFO     | sum of deviations: 1974189359.9999998
[2025-10-13 21:47:11] 2025-10-13 19:32:55,403 | INFO     | mean x: 1760379953.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,403 | INFO     | mean y: 2327732.7786259544
[2025-10-13 21:47:11] 2025-10-13 19:32:55,403 | INFO     | -- intersect: -4983396093.563008
[2025-10-13 21:47:11] 2025-10-13 19:32:55,403 | INFO     | intersect: -4983396093.563008
[2025-10-13 21:47:11] 2025-10-13 19:32:55,404 | INFO     | chi2: 0.000263368130556445
[2025-10-13 21:47:11] 2025-10-13 19:32:55,404 | INFO     | current chi2=0.000263368130556445 (change=9.386210371719924 %)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,404 | INFO     | left removable region: 40
[2025-10-13 21:47:11] 2025-10-13 19:32:55,404 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | sum of deviations: 719651587.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | mean x: 1760380380.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | mean y: 2330024.0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | -- intersect: -3527240625.948413
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | intersect: -3527240625.948413
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | chi2: 7.995264109043642e-05
[2025-10-13 21:47:11] 2025-10-13 19:32:55,405 | INFO     | -- intersect: -3527240625.948413
[2025-10-13 21:47:11] 2025-10-13 19:32:55,406 | INFO     | current memory leak: 2.01 B/s (using 105 data points, chi2=0.00)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,406 | INFO     | could have reported an average CPU frequency of 2735 MHz (9 samples)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,406 | INFO     | ..............................
[2025-10-13 21:47:11] 2025-10-13 19:32:55,406 | INFO     | . Timing measurements:
[2025-10-13 21:47:11] 2025-10-13 19:32:55,406 | INFO     | . get job = 0 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | . initial setup = 1 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | . payload setup = 8 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | . stage-in = 0 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | . payload execution = 9201 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | . stage-out = 1 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | . log creation = 0 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,407 | INFO     | ..............................
[2025-10-13 21:47:11] 2025-10-13 19:32:55,500 | INFO     | 
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | job summary report
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | --------------------------------------------------
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | PanDA job id: 6839221644
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | task id: 46676269
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | errors: (none)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:47:11] 2025-10-13 19:32:55,501 | INFO     | pilot state: finished 
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | transexitcode: 0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | exeerrorcode: 0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | exeerrordiag: 
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | exitcode: 0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | exitmsg: OK
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | cpuconsumptiontime: 35188 s
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | nevents: 400
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | neventsw: 0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | pid: 3706588
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | pgrp: 3706588
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | corecount: 4
[2025-10-13 21:47:11] 2025-10-13 19:32:55,502 | INFO     | event service: False
[2025-10-13 21:47:11] 2025-10-13 19:32:55,503 | INFO     | sizes: {0: 2348868, 6: 2349130, 11: 2349158, 9214: 2377942, 9216: 2387020, 9224: 2387222}
[2025-10-13 21:47:11] 2025-10-13 19:32:55,503 | INFO     | --------------------------------------------------
[2025-10-13 21:47:11] 2025-10-13 19:32:55,503 | INFO     | 
[2025-10-13 21:47:11] 2025-10-13 19:32:55,503 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-13 21:47:11] 2025-10-13 19:32:55,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | job 6839221644 has completed (purged errors)
[2025-10-13 21:47:11] 2025-10-13 19:32:55,536 | INFO     | overall cleanup function is called
[2025-10-13 21:47:11] 2025-10-13 19:32:56,545 | INFO     | --- collectZombieJob: --- 10, [3706588]
[2025-10-13 21:47:11] 2025-10-13 19:32:56,545 | INFO     | zombie collector waiting for pid 3706588
[2025-10-13 21:47:11] 2025-10-13 19:32:56,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:47:11] 2025-10-13 19:32:56,546 | INFO     | collected zombie processes
[2025-10-13 21:47:11] 2025-10-13 19:32:56,546 | INFO     | will attempt to kill all subprocesses of pid=3706588
[2025-10-13 21:47:11] 2025-10-13 19:32:57,301 | INFO     | process IDs to be killed: [3706588] (in reverse order)
[2025-10-13 21:47:11] 2025-10-13 19:32:57,548 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:47:11] 2025-10-13 19:32:57,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:47:11] 2025-10-13 19:32:57,579 | INFO     | did not find any defunct processes belonging to 3706588
[2025-10-13 21:47:11] 2025-10-13 19:32:57,607 | INFO     | did not find any defunct processes belonging to 3706588
[2025-10-13 21:47:11] 2025-10-13 19:32:57,608 | INFO     | ready for new job
[2025-10-13 21:47:11] 2025-10-13 19:32:57,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:47:11] 2025-10-13 19:32:57,610 | INFO     | ***************************************
[2025-10-13 21:47:11] 2025-10-13 19:32:57,610 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:47:11] 2025-10-13 19:32:57,610 | INFO     | ***************************************
[2025-10-13 21:47:11] 2025-10-13 19:32:57,610 | INFO     | 
[2025-10-13 21:47:11] 2025-10-13 19:32:57,618 | INFO     | architecture information:
[2025-10-13 21:47:11] 2025-10-13 19:32:57,618 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:47:11] 2025-10-13 19:32:57,641 | INFO     | cat /etc/os-release:
[2025-10-13 21:47:11] NAME="CentOS Linux"
[2025-10-13 21:47:11] VERSION="7 (Core)"
[2025-10-13 21:47:11] ID="centos"
[2025-10-13 21:47:11] ID_LIKE="rhel fedora"
[2025-10-13 21:47:11] VERSION_ID="7"
[2025-10-13 21:47:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:47:11] ANSI_COLOR="0;31"
[2025-10-13 21:47:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:47:11] HOME_URL="https://www.centos.org/"
[2025-10-13 21:47:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:47:11] 
[2025-10-13 21:47:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:47:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:47:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:47:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:47:11] 
[2025-10-13 21:47:11] 2025-10-13 19:32:57,641 | INFO     | ***************************************
[2025-10-13 21:47:11] 2025-10-13 19:32:58,144 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-13 21:47:11] 2025-10-13 19:32:58,169 | INFO     | sufficient remaining disk space (3346813419520 B)
[2025-10-13 21:47:11] 2025-10-13 19:32:58,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:47:11] 2025-10-13 19:32:58,170 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:47:11] 2025-10-13 19:32:58,170 | INFO     | update_server=False
[2025-10-13 21:47:11] 2025-10-13 19:32:58,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:47:11] 2025-10-13 19:32:58,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:47:11] 2025-10-13 19:32:58,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:47:11] 2025-10-13 19:32:58,801 | INFO     | all payload control threads have been joined
[2025-10-13 21:47:11] 2025-10-13 19:32:58,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:47:11] 2025-10-13 19:32:58,890 | INFO     | aborting loop
[2025-10-13 21:47:11] 2025-10-13 19:32:59,175 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,210 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,216 | INFO     | all data control threads have been joined
[2025-10-13 21:47:11] 2025-10-13 19:32:59,720 | INFO     | all job control threads have been joined
[2025-10-13 21:47:11] 2025-10-13 19:32:59,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,791 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,807 | INFO     | [payload] control thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,886 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:32:59,895 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:00,102 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:00,106 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:00,158 | INFO     | [job] validate thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:00,175 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:00,217 | INFO     | [data] control thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:00,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:47:11] 2025-10-13 19:33:00,726 | INFO     | [job] control thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:01,513 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:02,329 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:47:11] 2025-10-13 19:33:08,364 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:47:11] 2025-10-13 19:33:10,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23204723775296)>', '<ExcThread(monitor, started 23204410115840)>']
[2025-10-13 21:47:11] 2025-10-13 19:33:15,216 | INFO     | all workflow threads have been joined
[2025-10-13 21:47:11] 2025-10-13 19:33:15,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:47:11] 2025-10-13 19:33:15,217 | INFO     | traces error code: 0
[2025-10-13 21:47:11] 2025-10-13 19:33:15,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:47:11] 2025-10-13 19:33:27,460 | INFO     | 9244s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 21:47:11] 2025-10-13 19:33:29,306 | INFO     | PID=3684278 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:47:11] 2025-10-13 19:33:29,307 | INFO     | .. there are 7 such processes running
[2025-10-13 21:47:11] 2025-10-13 19:33:29,308 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:47:11] 2025-10-13 19:33:29,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:47:11] 2025-10-13 19:33:29,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:47:11] 2025-10-13 19:33:29,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:47:11] 2025-10-13 19:33:29,308 | INFO     | [monitor] control thread has ended
[2025-10-13 21:47:11] 2025-10-13 19:33:29,551 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:47:11] 2025-10-13 19:33:29,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:47:11] 2025-10-13 19:33:29,557 [wrapper] pilotpid: 3684278
[2025-10-13 21:47:11] 2025-10-13 19:33:29,559 [wrapper] Pilot exit status: 0
[2025-10-13 21:47:11] 2025-10-13 19:33:29,571 [wrapper] pandaids: 6839221644 6839221644
[2025-10-13 21:47:11] 2025-10-13 19:33:29,740 [wrapper] cleanup supervisor_pilot 4144922 3684279
[2025-10-13 21:47:11] 2025-10-13 19:33:29,745 [wrapper] Test setup, not cleaning
[2025-10-13 21:47:11] 2025-10-13 19:33:29,748 [wrapper] apfmon messages muted
[2025-10-13 21:47:11] 2025-10-13 19:33:29,752 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:47:11] 2025-10-13 19:33:29,756 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:47:11]  *** Error codes and diagnostics ***
[2025-10-13 21:47:11]     "exeErrorCode": 0,
[2025-10-13 21:47:11]     "exeErrorDiag": "",
[2025-10-13 21:47:11]     "pilotErrorCode": 0,
[2025-10-13 21:47:11]     "pilotErrorDiag": "",
[2025-10-13 21:47:11]  *** Listing of results directory ***
[2025-10-13 21:47:11] total 627484
[2025-10-13 21:47:11] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:26 pilot3.tar.gz
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:36 queuedata.json
[2025-10-13 21:47:11] -rwx------ 1 boinc boinc     36292 Oct 12 03:37 runpilot2-wrapper.sh
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:47:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:49 run_atlas
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:49 job.xml
[2025-10-13 21:47:11] -rw-r--r-- 3 boinc boinc 221084771 Oct 13 17:49 EVNT.46676267._003155.pool.root.1
[2025-10-13 21:47:11] -rw-r--r-- 3 boinc boinc 221084771 Oct 13 17:49 ATLAS.root_0
[2025-10-13 21:47:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:49 start_atlas.sh
[2025-10-13 21:47:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 17:49 shared
[2025-10-13 21:47:11] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:49 input.tar.gz
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:49 boinc_lockfile
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc      6693 Oct 13 18:58 init_data.xml
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc      2549 Oct 13 18:58 pandaJob.out
[2025-10-13 21:47:11] -rw------- 1 boinc boinc    972783 Oct 13 18:58 agis_schedconf.cvmfs.json
[2025-10-13 21:47:11] -rw------- 1 boinc boinc 193231703 Oct 13 21:32 HITS.46676269._068656.pool.root.1
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc       530 Oct 13 21:32 boinc_task_state.xml
[2025-10-13 21:47:11] -rw------- 1 boinc boinc      1026 Oct 13 21:32 memory_monitor_summary.json
[2025-10-13 21:47:11] -rw------- 1 boinc boinc   1560580 Oct 13 21:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:47:11] -rw------- 1 boinc boinc    321276 Oct 13 21:32 log.46676269._068656.job.log.tgz.1
[2025-10-13 21:47:11] -rw------- 1 boinc boinc      7778 Oct 13 21:32 heartbeat.json
[2025-10-13 21:47:11] -rw------- 1 boinc boinc        97 Oct 13 21:33 pilot_heartbeat.json
[2025-10-13 21:47:11] -rw------- 1 boinc boinc       937 Oct 13 21:33 pilotlog.txt
[2025-10-13 21:47:11] -rw------- 1 boinc boinc   1300205 Oct 13 21:33 log.46676269._068656.job.log.1
[2025-10-13 21:47:11] -rw------- 1 boinc boinc       357 Oct 13 21:33 output.list
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:33 runtime_log
[2025-10-13 21:47:11] -rw------- 1 boinc boinc   1638400 Oct 13 21:33 result.tar.gz
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc      9161 Oct 13 21:33 runtime_log.err
[2025-10-13 21:47:11] -rw------- 1 boinc boinc       788 Oct 13 21:33 OMoNDmyC0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnEiNDm7bvygm.diag
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:46 wrapper_checkpoint.txt
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:47 boinc_mmap_file
[2025-10-13 21:47:11] -rw-r--r-- 1 boinc boinc     22623 Oct 13 21:47 stderr.txt
[2025-10-13 21:47:11] HITS file was successfully produced:
[2025-10-13 21:47:11] -rw------- 1 boinc boinc 193231703 Oct 13 21:32 shared/HITS.pool.root.1
[2025-10-13 21:47:11]  *** Contents of shared directory: ***
[2025-10-13 21:47:11] total 406792
[2025-10-13 21:47:11] -rw-r--r-- 3 boinc boinc 221084771 Oct 13 17:49 ATLAS.root_0
[2025-10-13 21:47:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:49 start_atlas.sh
[2025-10-13 21:47:11] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:49 input.tar.gz
[2025-10-13 21:47:11] -rw------- 1 boinc boinc 193231703 Oct 13 21:32 HITS.pool.root.1
[2025-10-13 21:47:11] -rw------- 1 boinc boinc   1638400 Oct 13 21:33 result.tar.gz
21:47:12 (3672621): run_atlas exited; CPU time 35812.874227
21:47:12 (3672621): called boinc_finish(0)

</stderr_txt>
]]>

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