Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:58:21 (30068): wrapper (7.7.26015): starting
02:58:21 (30068): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 02:58:21] Arguments: --nthreads 8
[2025-10-12 02:58:21] Threads: 8
[2025-10-12 02:58:21] Checking for CVMFS
[2025-10-12 02:58:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:58:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:58:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:58:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:58:21] 2.11.2.0 2908 104731 83068 151611 3 58 13603899 20275201 1 130560 2 50962038 99.988 3329517 19667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:58:21] CVMFS is ok
[2025-10-12 02:58:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:58:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:58:21] Further information can be found at the LHC@home message board.
[2025-10-12 02:58:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:58:21] Checking for apptainer binary...
[2025-10-12 02:58:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:58:21] Running /usr/bin/apptainer --version
[2025-10-12 02:58:21] apptainer version 1.3.2-1.el7
[2025-10-12 02:58:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:58:23] c-115-5.aglt2.org
[2025-10-12 02:58:23] apptainer works
[2025-10-12 02:58:23] Set ATHENA_PROC_NUMBER=8
[2025-10-12 02:58:23] Set ATHENA_CORE_NUMBER=8
[2025-10-12 02:58:23] Starting ATLAS job with PandaID=6839221374
[2025-10-12 02:58:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:51:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:51:56] 2025-10-12 08:50:54,495 | INFO     | chi2: 1.3535242921360287
[2025-10-12 04:51:56] 2025-10-12 08:50:54,496 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,496 | INFO     | sum of deviations: 12654910916.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,496 | INFO     | mean x: 1760255523.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,496 | INFO     | mean y: 2490211.3619047618
[2025-10-12 04:51:56] 2025-10-12 08:50:54,497 | INFO     | -- intersect: -62059811793.90007
[2025-10-12 04:51:56] 2025-10-12 08:50:54,497 | INFO     | intersect: -62059811793.90007
[2025-10-12 04:51:56] 2025-10-12 08:50:54,497 | INFO     | chi2: 1.3561075888590053
[2025-10-12 04:51:56] 2025-10-12 08:50:54,497 | INFO     | current chi2=1.3561075888590053 (change=-0.1908570638876288 %)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,497 | INFO     | right removable region: 104
[2025-10-12 04:51:56] 2025-10-12 08:50:54,497 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,498 | INFO     | sum of deviations: -1260837792.0000005
[2025-10-12 04:51:56] 2025-10-12 08:50:54,498 | INFO     | mean x: 1760255828.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,498 | INFO     | mean y: 2532768.6
[2025-10-12 04:51:56] 2025-10-12 08:50:54,498 | INFO     | -- intersect: 6185943296.31094
[2025-10-12 04:51:56] 2025-10-12 08:50:54,498 | INFO     | intersect: 6185943296.31094
[2025-10-12 04:51:56] 2025-10-12 08:50:54,499 | INFO     | chi2: 0.05604343552662691
[2025-10-12 04:51:56] 2025-10-12 08:50:54,499 | INFO     | current chi2=0.05604343552662691 (change=95.85944368695569 %)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,499 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,499 | INFO     | sum of deviations: -935358994.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,499 | INFO     | mean x: 1760255980.5
[2025-10-12 04:51:56] 2025-10-12 08:50:54,500 | INFO     | mean y: 2531588.4
[2025-10-12 04:51:56] 2025-10-12 08:50:54,500 | INFO     | -- intersect: 5312832883.844128
[2025-10-12 04:51:56] 2025-10-12 08:50:54,500 | INFO     | intersect: 5312832883.844128
[2025-10-12 04:51:56] 2025-10-12 08:50:54,500 | INFO     | chi2: 0.041168089357290834
[2025-10-12 04:51:56] 2025-10-12 08:50:54,500 | INFO     | current chi2=0.041168089357290834 (change=26.54253085942353 %)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,500 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,501 | INFO     | sum of deviations: 1936776596.0000002
[2025-10-12 04:51:56] 2025-10-12 08:50:54,501 | INFO     | mean x: 1760256133.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,501 | INFO     | mean y: 2521787.5894736843
[2025-10-12 04:51:56] 2025-10-12 08:50:54,501 | INFO     | -- intersect: -12822386812.639997
[2025-10-12 04:51:56] 2025-10-12 08:50:54,501 | INFO     | intersect: -12822386812.639997
[2025-10-12 04:51:56] 2025-10-12 08:50:54,501 | INFO     | chi2: 0.0003033078478430505
[2025-10-12 04:51:56] 2025-10-12 08:50:54,502 | INFO     | current chi2=0.0003033078478430505 (change=99.26324526452834 %)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,502 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 04:51:56] 2025-10-12 08:50:54,502 | INFO     | sum of deviations: 1562405200.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,502 | INFO     | mean x: 1760256285.5
[2025-10-12 04:51:56] 2025-10-12 08:50:54,502 | INFO     | mean y: 2523219.888888889
[2025-10-12 04:51:56] 2025-10-12 08:50:54,502 | INFO     | -- intersect: -12165422034.5731
[2025-10-12 04:51:56] 2025-10-12 08:50:54,503 | INFO     | intersect: -12165422034.5731
[2025-10-12 04:51:56] 2025-10-12 08:50:54,503 | INFO     | chi2: 0.00026879085076362647
[2025-10-12 04:51:56] 2025-10-12 08:50:54,503 | INFO     | current chi2=0.00026879085076362647 (change=11.380185948002627 %)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,503 | INFO     | left removable region: 40
[2025-10-12 04:51:56] 2025-10-12 08:50:54,503 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,503 | INFO     | sum of deviations: 503437270.0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | mean x: 1760256712.5
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | mean y: 2527471.8125
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | -- intersect: -10902055686.05123
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | intersect: -10902055686.05123
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | chi2: 0.00016268956318899215
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | -- intersect: -10902055686.05123
[2025-10-12 04:51:56] 2025-10-12 08:50:54,504 | INFO     | current memory leak: 6.19 B/s (using 64 data points, chi2=0.00)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | could have reported an average CPU frequency of 2092 MHz (7 samples)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | ..............................
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | . Timing measurements:
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | . get job = 0 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | . initial setup = 2 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | . payload setup = 8 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,505 | INFO     | . stage-in = 0 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,506 | INFO     | . payload execution = 6694 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,506 | INFO     | . stage-out = 0 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,506 | INFO     | . log creation = 0 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,506 | INFO     | ..............................
[2025-10-12 04:51:56] 2025-10-12 08:50:54,664 | INFO     | time since job start (6734s) is within the limit (172800.0s)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,732 | INFO     | 
[2025-10-12 04:51:56] 2025-10-12 08:50:54,733 | INFO     | job summary report
[2025-10-12 04:51:56] 2025-10-12 08:50:54,733 | INFO     | --------------------------------------------------
[2025-10-12 04:51:56] 2025-10-12 08:50:54,733 | INFO     | PanDA job id: 6839221374
[2025-10-12 04:51:56] 2025-10-12 08:50:54,733 | INFO     | task id: 46676269
[2025-10-12 04:51:56] 2025-10-12 08:50:54,734 | INFO     | errors: (none)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:51:56] 2025-10-12 08:50:54,734 | INFO     | pilot state: finished 
[2025-10-12 04:51:56] 2025-10-12 08:50:54,734 | INFO     | transexitcode: 0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,734 | INFO     | exeerrorcode: 0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,734 | INFO     | exeerrordiag: 
[2025-10-12 04:51:56] 2025-10-12 08:50:54,735 | INFO     | exitcode: 0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,735 | INFO     | exitmsg: OK
[2025-10-12 04:51:56] 2025-10-12 08:50:54,735 | INFO     | cpuconsumptiontime: 48736 s
[2025-10-12 04:51:56] 2025-10-12 08:50:54,735 | INFO     | nevents: 400
[2025-10-12 04:51:56] 2025-10-12 08:50:54,735 | INFO     | neventsw: 0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,736 | INFO     | pid: 8046
[2025-10-12 04:51:56] 2025-10-12 08:50:54,736 | INFO     | pgrp: 8046
[2025-10-12 04:51:56] 2025-10-12 08:50:54,736 | INFO     | corecount: 8
[2025-10-12 04:51:56] 2025-10-12 08:50:54,736 | INFO     | event service: False
[2025-10-12 04:51:56] 2025-10-12 08:50:54,736 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6705: 2376288, 6706: 2376287, 6708: 2385341, 6709: 2385525, 6717: 2385719}
[2025-10-12 04:51:56] 2025-10-12 08:50:54,736 | INFO     | --------------------------------------------------
[2025-10-12 04:51:56] 2025-10-12 08:50:54,737 | INFO     | 
[2025-10-12 04:51:56] 2025-10-12 08:50:54,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 04:51:56] 2025-10-12 08:50:54,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,769 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:51:56] 2025-10-12 08:50:54,773 | INFO     | job 6839221374 has completed (purged errors)
[2025-10-12 04:51:56] 2025-10-12 08:50:54,773 | INFO     | overall cleanup function is called
[2025-10-12 04:51:56] 2025-10-12 08:50:55,774 | INFO     | PID=1398 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 04:51:56] 2025-10-12 08:50:55,781 | INFO     | --- collectZombieJob: --- 10, [8046]
[2025-10-12 04:51:56] 2025-10-12 08:50:55,781 | INFO     | zombie collector waiting for pid 8046
[2025-10-12 04:51:56] 2025-10-12 08:50:55,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:51:56] 2025-10-12 08:50:55,782 | INFO     | collected zombie processes
[2025-10-12 04:51:56] 2025-10-12 08:50:55,782 | INFO     | will attempt to kill all subprocesses of pid=8046
[2025-10-12 04:51:56] 2025-10-12 08:50:55,870 | INFO     | process IDs to be killed: [8046] (in reverse order)
[2025-10-12 04:51:56] 2025-10-12 08:50:55,927 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:51:56] 2025-10-12 08:50:55,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:51:56] 2025-10-12 08:50:55,932 | INFO     | did not find any defunct processes belonging to 8046
[2025-10-12 04:51:56] 2025-10-12 08:50:55,935 | INFO     | did not find any defunct processes belonging to 8046
[2025-10-12 04:51:56] 2025-10-12 08:50:55,935 | INFO     | ready for new job
[2025-10-12 04:51:56] 2025-10-12 08:50:55,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:51:56] 2025-10-12 08:50:55,937 | INFO     | ***************************************
[2025-10-12 04:51:56] 2025-10-12 08:50:55,937 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:51:56] 2025-10-12 08:50:55,937 | INFO     | ***************************************
[2025-10-12 04:51:56] 2025-10-12 08:50:55,937 | INFO     | 
[2025-10-12 04:51:56] 2025-10-12 08:50:55,938 | INFO     | architecture information:
[2025-10-12 04:51:56] 2025-10-12 08:50:55,938 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:51:56] 2025-10-12 08:50:55,960 | INFO     | cat /etc/os-release:
[2025-10-12 04:51:56] NAME="CentOS Linux"
[2025-10-12 04:51:56] VERSION="7 (Core)"
[2025-10-12 04:51:56] ID="centos"
[2025-10-12 04:51:56] ID_LIKE="rhel fedora"
[2025-10-12 04:51:56] VERSION_ID="7"
[2025-10-12 04:51:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:51:56] ANSI_COLOR="0;31"
[2025-10-12 04:51:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:51:56] HOME_URL="https://www.centos.org/"
[2025-10-12 04:51:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:51:56] 
[2025-10-12 04:51:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:51:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:51:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:51:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:51:56] 
[2025-10-12 04:51:56] 2025-10-12 08:50:55,961 | INFO     | ***************************************
[2025-10-12 04:51:56] 2025-10-12 08:50:56,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 04:51:56] 2025-10-12 08:50:56,487 | INFO     | sufficient remaining disk space (18601738240 B)
[2025-10-12 04:51:56] 2025-10-12 08:50:56,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:51:56] 2025-10-12 08:50:56,488 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:51:56] 2025-10-12 08:50:56,488 | INFO     | update_server=False
[2025-10-12 04:51:56] 2025-10-12 08:50:56,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:51:56] 2025-10-12 08:50:56,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:51:56] 2025-10-12 08:50:56,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:51:56] 2025-10-12 08:50:56,489 | INFO     | aborting loop
[2025-10-12 04:51:56] 2025-10-12 08:50:56,490 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 04:51:56] 2025-10-12 08:50:56,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:51:56] 2025-10-12 08:50:56,490 | INFO     | all job control threads have been joined
[2025-10-12 04:51:56] 2025-10-12 08:50:56,491 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:51:56] 2025-10-12 08:50:56,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:51:56] 2025-10-12 08:50:56,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:51:56] 2025-10-12 08:50:56,887 | INFO     | all data control threads have been joined
[2025-10-12 04:51:56] 2025-10-12 08:50:57,494 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,494 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,496 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,497 | INFO     | [job] control thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,652 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,839 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:51:56] 2025-10-12 08:50:57,893 | INFO     | [data] control thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:57,899 | INFO     | all payload control threads have been joined
[2025-10-12 04:51:56] 2025-10-12 08:50:58,180 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:58,497 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:58,602 | INFO     | [job] validate thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:58,717 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:58,734 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:58,901 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:50:58,904 | INFO     | [payload] control thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:51:01,875 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:51:06,894 | INFO     | job.realtimelogging is not enabled
[2025-10-12 04:51:56] 2025-10-12 08:51:07,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:51:56] 2025-10-12 08:51:50,904 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:51:56] 2025-10-12 08:51:51,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056179988288)>', '<ExcThread(monitor, started 140055351895808)>']
[2025-10-12 04:51:56] 2025-10-12 08:51:51,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:51:56] 2025-10-12 08:51:51,752 | INFO     | [monitor] control thread has ended
[2025-10-12 04:51:56] 2025-10-12 08:51:56,062 | INFO     | all workflow threads have been joined
[2025-10-12 04:51:56] 2025-10-12 08:51:56,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:51:56] 2025-10-12 08:51:56,066 | INFO     | traces error code: 0
[2025-10-12 04:51:56] 2025-10-12 08:51:56,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:51:56] 2025-10-12 08:51:56,193 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:51:56] 2025-10-12 08:51:56,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:51:56] 2025-10-12 08:51:56,201 [wrapper] pilotpid: 1398
[2025-10-12 04:51:56] 2025-10-12 08:51:56,206 [wrapper] Pilot exit status: 0
[2025-10-12 04:51:56] 2025-10-12 08:51:56,223 [wrapper] pandaids: 6839221374
[2025-10-12 04:51:56] 2025-10-12 08:51:56,271 [wrapper] cleanup supervisor_pilot 17992 1399
[2025-10-12 04:51:56] 2025-10-12 08:51:56,276 [wrapper] Test setup, not cleaning
[2025-10-12 04:51:56] 2025-10-12 08:51:56,281 [wrapper] apfmon messages muted
[2025-10-12 04:51:56] 2025-10-12 08:51:56,285 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:51:56] 2025-10-12 08:51:56,290 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:51:56]  *** Error codes and diagnostics ***
[2025-10-12 04:51:56]     "exeErrorCode": 0,
[2025-10-12 04:51:56]     "exeErrorDiag": "",
[2025-10-12 04:51:56]     "pilotErrorCode": 0,
[2025-10-12 04:51:56]     "pilotErrorDiag": "",
[2025-10-12 04:51:56]  *** Listing of results directory ***
[2025-10-12 04:51:56] total 402772
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 21:30 queuedata.json
[2025-10-12 04:51:56] -rwx------ 1 boincer umatlas     36292 Oct 11 21:30 runpilot2-wrapper.sh
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas       100 Oct 12 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:51:56] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 02:58 run_atlas
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas       105 Oct 12 02:58 job.xml
[2025-10-12 04:51:56] -rw-r--r-- 2 boincer umatlas 218618277 Oct 12 02:58 EVNT.46676267._003146.pool.root.1
[2025-10-12 04:51:56] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:58 start_atlas.sh
[2025-10-12 04:51:56] drwxrwx--x 2 boincer umatlas      4096 Oct 12 02:58 shared
[2025-10-12 04:51:56] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 02:58 input.tar.gz
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas         0 Oct 12 02:58 boinc_lockfile
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 02:58 pandaJob.out
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas    975528 Oct 12 02:58 agis_schedconf.cvmfs.json
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas   1560580 Oct 12 02:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:51:56] drwx------ 5 boincer umatlas      4096 Oct 12 02:58 pilot3
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas      5908 Oct 12 04:47 init_data.xml
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas        95 Oct 12 04:50 pilot_heartbeat.json
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas 187310435 Oct 12 04:50 HITS.46676269._068459.pool.root.1
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas       530 Oct 12 04:50 boinc_task_state.xml
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas      1050 Oct 12 04:50 memory_monitor_summary.json
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas    349276 Oct 12 04:50 log.46676269._068459.job.log.tgz.1
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas      7843 Oct 12 04:50 heartbeat.json
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas        27 Oct 12 04:51 wrapper_checkpoint.txt
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 04:51 boinc_mmap_file
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas      4624 Oct 12 04:51 pilotlog.txt
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas    953628 Oct 12 04:51 log.46676269._068459.job.log.1
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas       357 Oct 12 04:51 output.list
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas       620 Oct 12 04:51 runtime_log
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas   1320960 Oct 12 04:51 result.tar.gz
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 04:51 runtime_log.err
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas       658 Oct 12 04:51 6R4LDmA6zR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHwSMDmZ8yfBn.diag
[2025-10-12 04:51:56] -rw-r--r-- 1 boincer umatlas     20916 Oct 12 04:51 stderr.txt
[2025-10-12 04:51:56] HITS file was successfully produced:
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas 187310435 Oct 12 04:50 shared/HITS.pool.root.1
[2025-10-12 04:51:56]  *** Contents of shared directory: ***
[2025-10-12 04:51:56] total 398292
[2025-10-12 04:51:56] -rw-r--r-- 2 boincer umatlas 218618277 Oct 12 02:58 ATLAS.root_0
[2025-10-12 04:51:56] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:58 start_atlas.sh
[2025-10-12 04:51:56] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 02:58 input.tar.gz
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas 187310435 Oct 12 04:50 HITS.pool.root.1
[2025-10-12 04:51:56] -rw------- 1 boincer umatlas   1320960 Oct 12 04:51 result.tar.gz
04:51:57 (30068): run_atlas exited; CPU time 48745.017655
04:51:57 (30068): called boinc_finish(0)

</stderr_txt>
]]>

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