Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:30:26 (3526811): wrapper (7.7.26015): starting
23:30:26 (3526811): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 23:30:26] Arguments: --nthreads 6
[2025-10-12 23:30:26] Threads: 6
[2025-10-12 23:30:26] Checking for CVMFS
[2025-10-12 23:30:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:30:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:30:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:30:27] 2.12.7.0 249871 5993 93692 151623 1 59 13903955 20971521 33 130560 0 10185721 99.995 209961 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 23:30:27] CVMFS is ok
[2025-10-12 23:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:30:27] Checking for apptainer binary...
[2025-10-12 23:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:30:27] Running /usr/bin/apptainer --version
[2025-10-12 23:30:27] apptainer version 1.4.0-1.el9
[2025-10-12 23:30:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:30:27] testio005
[2025-10-12 23:30:27] apptainer works
[2025-10-12 23:30:27] Set ATHENA_PROC_NUMBER=6
[2025-10-12 23:30:27] Set ATHENA_CORE_NUMBER=6
[2025-10-12 23:30:27] Starting ATLAS job with PandaID=6838989706
[2025-10-12 23:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:02:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:02:05] 2025-10-12 16:01:09,033 | INFO     | monitor loop #418: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:09,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:10,497 | INFO     | time since job start (5434s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:11,537 | INFO     | monitor loop #419: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:11,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:12,503 | INFO     | time since job start (5436s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:14,041 | INFO     | monitor loop #420: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:14,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:14,506 | INFO     | time since job start (5438s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:15,599 | INFO     | PID=3531251 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:02:05] 2025-10-12 16:01:15,599 | INFO     | .. there are 2 such processes running
[2025-10-13 01:02:05] 2025-10-12 16:01:16,545 | INFO     | monitor loop #421: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:16,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:16,600 | INFO     | time since job start (5440s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:18,605 | INFO     | time since job start (5442s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:19,050 | INFO     | monitor loop #422: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:19,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:20,611 | INFO     | time since job start (5444s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:21,553 | INFO     | monitor loop #423: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:21,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:22,617 | INFO     | time since job start (5446s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:24,057 | INFO     | monitor loop #424: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:24,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:24,622 | INFO     | time since job start (5448s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:26,560 | INFO     | monitor loop #425: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:26,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:26,628 | INFO     | time since job start (5450s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:26,628 | INFO     | 5454s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 01:02:05] 2025-10-12 16:01:28,634 | INFO     | time since job start (5452s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:29,064 | INFO     | monitor loop #426: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:29,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:30,639 | INFO     | time since job start (5454s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:31,568 | INFO     | monitor loop #427: job 0:6838989706 is in state 'finished'
[2025-10-13 01:02:05] 2025-10-12 16:01:31,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:02:05] 2025-10-12 16:01:32,645 | INFO     | time since job start (5456s) is within the limit (172800.0s)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,373 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:02:05] 2025-10-12 16:01:33,375 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3312.4848125000003
[2025-10-13 01:02:05] 2025-10-12 16:01:33,378 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838989706/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,378 | INFO     | extracted standard info from prmon json
[2025-10-13 01:02:05] 2025-10-12 16:01:33,378 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:02:05] 2025-10-12 16:01:33,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:02:05] 2025-10-12 16:01:33,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:02:05] 2025-10-12 16:01:33,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | sum of square deviations: 164765880.0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | sum of deviations: -7932331603.0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | mean x: 1760282202.0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | mean y: 2533339.4567901236
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | -- intersect: 84747883172.34105
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | intersect: 84747883172.34105
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | chi2: 0.04875706355883421
[2025-10-13 01:02:05] 2025-10-12 16:01:33,380 | INFO     | -- intersect: 84747883172.34105
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | current memory leak: -48.14 B/s (using 81 data points, chi2=0.05)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | could have reported an average CPU frequency of 3323 MHz (6 samples)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | ..............................
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . Timing measurements:
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . get job = 0 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . initial setup = 4 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . payload setup = 3 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . stage-in = 0 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . payload execution = 5355 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . stage-out = 0 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | . log creation = 0 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,381 | INFO     | ..............................
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | 
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | job summary report
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | --------------------------------------------------
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | PanDA job id: 6838989706
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | task id: 46676269
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | errors: (none)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | pilot state: finished 
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | transexitcode: 0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,497 | INFO     | exeerrorcode: 0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | exeerrordiag: 
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | exitcode: 0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | exitmsg: OK
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | cpuconsumptiontime: 29870 s
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | nevents: 400
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | neventsw: 0
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | pid: 3551106
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | pgrp: 3551106
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | corecount: 6
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | event service: False
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | sizes: {0: 2348686, 1: 2348885, 3: 2349147, 11: 2349175, 5363: 2384744, 5365: 2384744, 5443: 2385066}
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | --------------------------------------------------
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | 
[2025-10-13 01:02:05] 2025-10-12 16:01:33,498 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 01:02:05] 2025-10-12 16:01:33,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:02:05] 2025-10-12 16:01:33,512 | INFO     | job 6838989706 has completed (purged errors)
[2025-10-13 01:02:05] 2025-10-12 16:01:33,512 | INFO     | overall cleanup function is called
[2025-10-13 01:02:05] 2025-10-12 16:01:34,518 | INFO     | --- collectZombieJob: --- 10, [3551106]
[2025-10-13 01:02:05] 2025-10-12 16:01:34,518 | INFO     | zombie collector waiting for pid 3551106
[2025-10-13 01:02:05] 2025-10-12 16:01:34,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:02:05] 2025-10-12 16:01:34,519 | INFO     | collected zombie processes
[2025-10-13 01:02:05] 2025-10-12 16:01:34,519 | INFO     | will attempt to kill all subprocesses of pid=3551106
[2025-10-13 01:02:05] 2025-10-12 16:01:34,588 | INFO     | process IDs to be killed: [3551106] (in reverse order)
[2025-10-13 01:02:05] 2025-10-12 16:01:34,617 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:02:05] 2025-10-12 16:01:34,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:02:05] 2025-10-12 16:01:34,620 | INFO     | did not find any defunct processes belonging to 3551106
[2025-10-13 01:02:05] 2025-10-12 16:01:34,622 | INFO     | did not find any defunct processes belonging to 3551106
[2025-10-13 01:02:05] 2025-10-12 16:01:34,622 | INFO     | ready for new job
[2025-10-13 01:02:05] 2025-10-12 16:01:34,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:02:05] 2025-10-12 16:01:34,623 | INFO     | ***************************************
[2025-10-13 01:02:05] 2025-10-12 16:01:34,623 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:02:05] 2025-10-12 16:01:34,623 | INFO     | ***************************************
[2025-10-13 01:02:05] 2025-10-12 16:01:34,624 | INFO     | 
[2025-10-13 01:02:05] 2025-10-12 16:01:34,624 | INFO     | architecture information:
[2025-10-13 01:02:05] 2025-10-12 16:01:34,624 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:02:05] 2025-10-12 16:01:34,633 | INFO     | cat /etc/os-release:
[2025-10-13 01:02:05] NAME="CentOS Linux"
[2025-10-13 01:02:05] VERSION="7 (Core)"
[2025-10-13 01:02:05] ID="centos"
[2025-10-13 01:02:05] ID_LIKE="rhel fedora"
[2025-10-13 01:02:05] VERSION_ID="7"
[2025-10-13 01:02:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:02:05] ANSI_COLOR="0;31"
[2025-10-13 01:02:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:02:05] HOME_URL="https://www.centos.org/"
[2025-10-13 01:02:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:02:05] 
[2025-10-13 01:02:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:02:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:02:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:02:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:02:05] 
[2025-10-13 01:02:05] 2025-10-12 16:01:34,633 | INFO     | ***************************************
[2025-10-13 01:02:05] 2025-10-12 16:01:35,135 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 01:02:05] 2025-10-12 16:01:35,146 | INFO     | sufficient remaining disk space (96545538048 B)
[2025-10-13 01:02:05] 2025-10-12 16:01:35,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:02:05] 2025-10-12 16:01:35,146 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:02:05] 2025-10-12 16:01:35,146 | INFO     | update_server=False
[2025-10-13 01:02:05] 2025-10-12 16:01:35,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:02:05] 2025-10-12 16:01:35,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:02:05] 2025-10-12 16:01:35,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:02:05] 2025-10-12 16:01:35,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:02:05] 2025-10-12 16:01:35,147 | INFO     | aborting loop
[2025-10-13 01:02:05] 2025-10-12 16:01:35,353 | INFO     | all payload control threads have been joined
[2025-10-13 01:02:05] 2025-10-12 16:01:35,764 | INFO     | all job control threads have been joined
[2025-10-13 01:02:05] 2025-10-12 16:01:35,942 | INFO     | all data control threads have been joined
[2025-10-13 01:02:05] 2025-10-12 16:01:36,152 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,153 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,153 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,276 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,306 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,358 | INFO     | [payload] control thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,389 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,725 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,756 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,769 | INFO     | [job] control thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:36,947 | INFO     | [data] control thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:37,152 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:37,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:02:05] 2025-10-12 16:01:37,529 | INFO     | [job] validate thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:37,533 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:41,531 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:44,124 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:02:05] 2025-10-12 16:01:45,650 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:02:05] 2025-10-12 16:01:46,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:02:05] 2025-10-12 16:01:47,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812552906560)>', '<ExcThread(monitor, started 139811780290304)>']
[2025-10-13 01:02:05] 2025-10-12 16:01:52,048 | INFO     | all workflow threads have been joined
[2025-10-13 01:02:05] 2025-10-12 16:01:52,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:02:05] 2025-10-12 16:01:52,049 | INFO     | traces error code: 0
[2025-10-13 01:02:05] 2025-10-12 16:01:52,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:02:05] 2025-10-12 16:02:05,751 | INFO     | PID=3531251 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:02:05] 2025-10-12 16:02:05,751 | INFO     | .. there are 2 such processes running
[2025-10-13 01:02:05] 2025-10-12 16:02:05,751 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:02:05] 2025-10-12 16:02:05,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:02:05] 2025-10-12 16:02:05,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:02:05] 2025-10-12 16:02:05,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:02:05] 2025-10-12 16:02:05,752 | INFO     | [monitor] control thread has ended
[2025-10-13 01:02:05] 2025-10-12 16:02:05,814 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:02:05] 2025-10-12 16:02:05,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:02:05] 2025-10-12 16:02:05,818 [wrapper] pilotpid: 3531251
[2025-10-13 01:02:05] 2025-10-12 16:02:05,820 [wrapper] Pilot exit status: 0
[2025-10-13 01:02:05] 2025-10-12 16:02:05,826 [wrapper] pandaids: 6838989706
[2025-10-13 01:02:05] 2025-10-12 16:02:05,846 [wrapper] cleanup supervisor_pilot 3567955 3531252
[2025-10-13 01:02:05] 2025-10-12 16:02:05,847 [wrapper] Test setup, not cleaning
[2025-10-13 01:02:05] 2025-10-12 16:02:05,849 [wrapper] apfmon messages muted
[2025-10-13 01:02:05] 2025-10-12 16:02:05,851 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:02:05] 2025-10-12 16:02:05,853 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:02:05]  *** Error codes and diagnostics ***
[2025-10-13 01:02:05]     "exeErrorCode": 0,
[2025-10-13 01:02:05]     "exeErrorDiag": "",
[2025-10-13 01:02:05]     "pilotErrorCode": 0,
[2025-10-13 01:02:05]     "pilotErrorDiag": "",
[2025-10-13 01:02:05]  *** Listing of results directory ***
[2025-10-13 01:02:05] total 415116
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:39 pilot3.tar.gz
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:00 queuedata.json
[2025-10-13 01:02:05] -rwx------. 1 boinc boinc     36292 Oct 12 07:00 runpilot2-wrapper.sh
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc       100 Oct 12 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:02:05] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 23:30 run_atlas
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc       105 Oct 12 23:30 job.xml
[2025-10-13 01:02:05] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:30 start_atlas.sh
[2025-10-13 01:02:05] drwxrwx--x. 2 boinc boinc        68 Oct 12 23:30 shared
[2025-10-13 01:02:05] -rw-r--r--. 2 boinc boinc    569685 Oct 12 23:30 input.tar.gz
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc      9362 Oct 12 23:30 init_data.xml
[2025-10-13 01:02:05] -rw-r--r--. 2 boinc boinc 223086395 Oct 12 23:30 EVNT.46676267._002636.pool.root.1
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc         0 Oct 12 23:30 boinc_lockfile
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc      2550 Oct 12 23:30 pandaJob.out
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc    975528 Oct 12 23:30 agis_schedconf.cvmfs.json
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc   1560580 Oct 12 23:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:02:05] drwx------. 5 boinc boinc      4096 Oct 12 23:30 pilot3
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc 195922005 Oct 13 00:59 HITS.46676269._065614.pool.root.1
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc       529 Oct 13 01:00 boinc_task_state.xml
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc      1018 Oct 13 01:00 memory_monitor_summary.json
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc    295501 Oct 13 01:00 log.46676269._065614.job.log.tgz.1
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc        95 Oct 13 01:01 pilot_heartbeat.json
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc      7751 Oct 13 01:01 heartbeat.json
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc        27 Oct 13 01:01 wrapper_checkpoint.txt
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc      8192 Oct 13 01:01 boinc_mmap_file
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc       822 Oct 13 01:02 pilotlog.txt
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc    796107 Oct 13 01:02 log.46676269._065614.job.log.1
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc       357 Oct 13 01:02 output.list
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc       620 Oct 13 01:02 runtime_log
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc   1105920 Oct 13 01:02 result.tar.gz
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc      8661 Oct 13 01:02 runtime_log.err
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc       641 Oct 13 01:02 RDsLDmhowR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAjhNDm8AqaVn.diag
[2025-10-13 01:02:05] -rw-r--r--. 1 boinc boinc     21948 Oct 13 01:02 stderr.txt
[2025-10-13 01:02:05] HITS file was successfully produced:
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc 195922005 Oct 13 00:59 shared/HITS.pool.root.1
[2025-10-13 01:02:05]  *** Contents of shared directory: ***
[2025-10-13 01:02:05] total 410848
[2025-10-13 01:02:05] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:30 start_atlas.sh
[2025-10-13 01:02:05] -rw-r--r--. 2 boinc boinc    569685 Oct 12 23:30 input.tar.gz
[2025-10-13 01:02:05] -rw-r--r--. 2 boinc boinc 223086395 Oct 12 23:30 ATLAS.root_0
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc 195922005 Oct 13 00:59 HITS.pool.root.1
[2025-10-13 01:02:05] -rw-------. 1 boinc boinc   1105920 Oct 13 01:02 result.tar.gz
01:02:07 (3526811): run_atlas exited; CPU time 29930.741274
01:02:07 (3526811): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN