Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:51:40 (26268): wrapper (7.7.26015): starting
02:51:40 (26268): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 02:51:40] Arguments: --nthreads 8
[2025-10-12 02:51:40] Threads: 8
[2025-10-12 02:51:40] Checking for CVMFS
[2025-10-12 02:51:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:51:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:51:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:51:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:51:41] 2.11.2.0 3643 747 61400 151611 1 188 9756573 18432000 1833 130560 0 1217145 99.996 23898 32338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 02:51:41] CVMFS is ok
[2025-10-12 02:51:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:51:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:51:41] Further information can be found at the LHC@home message board.
[2025-10-12 02:51:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:51:41] Checking for apptainer binary...
[2025-10-12 02:51:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:51:41] Running /usr/bin/apptainer --version
[2025-10-12 02:51:41] apptainer version 1.3.2-1.el7
[2025-10-12 02:51:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:51:41] c-206-15.aglt2.org
[2025-10-12 02:51:41] apptainer works
[2025-10-12 02:51:41] Set ATHENA_PROC_NUMBER=8
[2025-10-12 02:51:41] Set ATHENA_CORE_NUMBER=8
[2025-10-12 02:51:41] Starting ATLAS job with PandaID=6838852063
[2025-10-12 02:51:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:05:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:05:15] 2025-10-12 10:04:25,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:05:15] 2025-10-12 10:04:25,570 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:05:15] 2025-10-12 10:04:25,571 | INFO     | sum of square deviations: 2093397390.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,572 | INFO     | sum of deviations: 25032974368.999992
[2025-10-12 06:05:15] 2025-10-12 10:04:25,572 | INFO     | mean x: 1760257668.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,572 | INFO     | mean y: 2470501.91005291
[2025-10-12 06:05:15] 2025-10-12 10:04:25,572 | INFO     | -- intersect: -21046798641.33642
[2025-10-12 06:05:15] 2025-10-12 10:04:25,572 | INFO     | intersect: -21046798641.33642
[2025-10-12 06:05:15] 2025-10-12 10:04:25,572 | INFO     | chi2: 1.2582475721382806
[2025-10-12 06:05:15] 2025-10-12 10:04:25,573 | INFO     | sum of square deviations: 1931608310.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,573 | INFO     | sum of deviations: 24202336819.999996
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | mean x: 1760257515.5
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | mean y: 2469719.184782609
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | -- intersect: -22052905099.567867
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | intersect: -22052905099.567867
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | chi2: 1.2589823890653529
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | current chi2=1.2589823890653529 (change=-0.05840002741459436 %)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,574 | INFO     | right removable region: 183
[2025-10-12 06:05:15] 2025-10-12 10:04:25,575 | INFO     | sum of square deviations: 1931608310.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,575 | INFO     | sum of deviations: -603624767.9999975
[2025-10-12 06:05:15] 2025-10-12 10:04:25,576 | INFO     | mean x: 1760257820.5
[2025-10-12 06:05:15] 2025-10-12 10:04:25,576 | INFO     | mean y: 2494381.4891304346
[2025-10-12 06:05:15] 2025-10-12 10:04:25,576 | INFO     | -- intersect: 552572372.466242
[2025-10-12 06:05:15] 2025-10-12 10:04:25,576 | INFO     | intersect: 552572372.466242
[2025-10-12 06:05:15] 2025-10-12 10:04:25,576 | INFO     | chi2: 0.026976884904574516
[2025-10-12 06:05:15] 2025-10-12 10:04:25,576 | INFO     | current chi2=0.026976884904574516 (change=97.85599547323348 %)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,577 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,577 | INFO     | sum of deviations: -2630810928.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | mean x: 1760257973.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | mean y: 2496354.3966480447
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | -- intersect: 2606502440.4764295
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | intersect: 2606502440.4764295
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | chi2: 0.011263004395036035
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | current chi2=0.011263004395036035 (change=58.24942562910165 %)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,578 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 06:05:15] 2025-10-12 10:04:25,579 | INFO     | sum of deviations: -1234870610.5000005
[2025-10-12 06:05:15] 2025-10-12 10:04:25,579 | INFO     | mean x: 1760258125.5
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | mean y: 2494879.9137931033
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | -- intersect: 1333212747.957329
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | intersect: 1333212747.957329
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | chi2: 0.009501350821501196
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | current chi2=0.009501350821501196 (change=15.641062648535026 %)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | left removable region: 30
[2025-10-12 06:05:15] 2025-10-12 10:04:25,580 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,581 | INFO     | sum of deviations: 2081666601.9999986
[2025-10-12 06:05:15] 2025-10-12 10:04:25,581 | INFO     | mean x: 1760258400.0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,581 | INFO     | mean y: 2490488.3464052286
[2025-10-12 06:05:15] 2025-10-12 10:04:25,581 | INFO     | -- intersect: -3297049806.033181
[2025-10-12 06:05:15] 2025-10-12 10:04:25,582 | INFO     | intersect: -3297049806.033181
[2025-10-12 06:05:15] 2025-10-12 10:04:25,582 | INFO     | chi2: 0.00011061893928161476
[2025-10-12 06:05:15] 2025-10-12 10:04:25,582 | INFO     | -- intersect: -3297049806.033181
[2025-10-12 06:05:15] 2025-10-12 10:04:25,582 | INFO     | current memory leak: 1.87 B/s (using 153 data points, chi2=0.00)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,582 | INFO     | could have reported an average CPU frequency of 2442 MHz (10 samples)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | ..............................
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . Timing measurements:
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . get job = 0 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . initial setup = 2 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . payload setup = 4 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . stage-in = 0 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . payload execution = 11522 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . stage-out = 2 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | . log creation = 0 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,583 | INFO     | ..............................
[2025-10-12 06:05:15] 2025-10-12 10:04:25,661 | INFO     | 
[2025-10-12 06:05:15] 2025-10-12 10:04:25,661 | INFO     | job summary report
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | --------------------------------------------------
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | PanDA job id: 6838852063
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | task id: 46676269
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | errors: (none)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | pilot state: finished 
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | transexitcode: 0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | exeerrorcode: 0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | exeerrordiag: 
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | exitcode: 0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,662 | INFO     | exitmsg: OK
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | cpuconsumptiontime: 86621 s
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | nevents: 400
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | neventsw: 0
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | pid: 4100
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | pgrp: 4100
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | corecount: 8
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | event service: False
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | sizes: {0: 2348850, 1: 2348850, 4: 2349140, 11: 2349168, 11530: 2378578, 11533: 2387576, 11535: 2387760, 11540: 2387954}
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | --------------------------------------------------
[2025-10-12 06:05:15] 2025-10-12 10:04:25,663 | INFO     | 
[2025-10-12 06:05:15] 2025-10-12 10:04:25,664 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 06:05:15] 2025-10-12 10:04:25,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:05:15] 2025-10-12 10:04:25,681 | INFO     | job 6838852063 has completed (purged errors)
[2025-10-12 06:05:15] 2025-10-12 10:04:25,681 | INFO     | overall cleanup function is called
[2025-10-12 06:05:15] 2025-10-12 10:04:26,688 | INFO     | --- collectZombieJob: --- 10, [4100]
[2025-10-12 06:05:15] 2025-10-12 10:04:26,688 | INFO     | zombie collector waiting for pid 4100
[2025-10-12 06:05:15] 2025-10-12 10:04:26,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:05:15] 2025-10-12 10:04:26,688 | INFO     | collected zombie processes
[2025-10-12 06:05:15] 2025-10-12 10:04:26,688 | INFO     | will attempt to kill all subprocesses of pid=4100
[2025-10-12 06:05:15] 2025-10-12 10:04:26,795 | INFO     | process IDs to be killed: [4100] (in reverse order)
[2025-10-12 06:05:15] 2025-10-12 10:04:26,833 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:05:15] 2025-10-12 10:04:26,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:05:15] 2025-10-12 10:04:26,836 | INFO     | did not find any defunct processes belonging to 4100
[2025-10-12 06:05:15] 2025-10-12 10:04:26,838 | INFO     | did not find any defunct processes belonging to 4100
[2025-10-12 06:05:15] 2025-10-12 10:04:26,838 | INFO     | ready for new job
[2025-10-12 06:05:15] 2025-10-12 10:04:26,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:05:15] 2025-10-12 10:04:26,840 | INFO     | ***************************************
[2025-10-12 06:05:15] 2025-10-12 10:04:26,840 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:05:15] 2025-10-12 10:04:26,840 | INFO     | ***************************************
[2025-10-12 06:05:15] 2025-10-12 10:04:26,840 | INFO     | 
[2025-10-12 06:05:15] 2025-10-12 10:04:26,841 | INFO     | architecture information:
[2025-10-12 06:05:15] 2025-10-12 10:04:26,842 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:05:15] 2025-10-12 10:04:26,850 | INFO     | cat /etc/os-release:
[2025-10-12 06:05:15] NAME="CentOS Linux"
[2025-10-12 06:05:15] VERSION="7 (Core)"
[2025-10-12 06:05:15] ID="centos"
[2025-10-12 06:05:15] ID_LIKE="rhel fedora"
[2025-10-12 06:05:15] VERSION_ID="7"
[2025-10-12 06:05:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:05:15] ANSI_COLOR="0;31"
[2025-10-12 06:05:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:05:15] HOME_URL="https://www.centos.org/"
[2025-10-12 06:05:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:05:15] 
[2025-10-12 06:05:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:05:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:05:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:05:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:05:15] 
[2025-10-12 06:05:15] 2025-10-12 10:04:26,851 | INFO     | ***************************************
[2025-10-12 06:05:15] 2025-10-12 10:04:27,353 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 06:05:15] 2025-10-12 10:04:27,363 | INFO     | sufficient remaining disk space (27838644224 B)
[2025-10-12 06:05:15] 2025-10-12 10:04:27,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:05:15] 2025-10-12 10:04:27,363 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:05:15] 2025-10-12 10:04:27,364 | INFO     | update_server=False
[2025-10-12 06:05:15] 2025-10-12 10:04:27,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:05:15] 2025-10-12 10:04:27,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:05:15] 2025-10-12 10:04:27,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:05:15] 2025-10-12 10:04:27,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:05:15] 2025-10-12 10:04:27,724 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 06:05:15] 2025-10-12 10:04:27,724 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 06:05:15] 2025-10-12 10:04:27,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:05:15] 2025-10-12 10:04:27,725 | INFO     | will abort loop
[2025-10-12 06:05:15] 2025-10-12 10:04:27,807 | INFO     | all data control threads have been joined
[2025-10-12 06:05:15] 2025-10-12 10:04:28,369 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,369 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,373 | INFO     | all payload control threads have been joined
[2025-10-12 06:05:15] 2025-10-12 10:04:28,435 | INFO     | all job control threads have been joined
[2025-10-12 06:05:15] 2025-10-12 10:04:28,541 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,730 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,747 | INFO     | [job] validate thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,813 | INFO     | [data] control thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:28,973 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,003 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,004 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,329 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,370 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,378 | INFO     | [payload] control thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,440 | INFO     | [job] control thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:29,762 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:31,370 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:05:15] 2025-10-12 10:04:56,916 | INFO     | PID=29944 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 06:05:15] 2025-10-12 10:04:56,916 | INFO     | .. there are 3 such processes running
[2025-10-12 06:05:15] 2025-10-12 10:04:56,917 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:05:15] 2025-10-12 10:04:56,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:05:15] 2025-10-12 10:04:56,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:05:15] 2025-10-12 10:05:09,666 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:05:15] 2025-10-12 10:05:10,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870138763072)>', '<ExcThread(monitor, started 139869561022208)>']
[2025-10-12 06:05:15] 2025-10-12 10:05:10,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:05:15] 2025-10-12 10:05:10,968 | INFO     | [monitor] control thread has ended
[2025-10-12 06:05:15] 2025-10-12 10:05:15,376 | INFO     | all workflow threads have been joined
[2025-10-12 06:05:15] 2025-10-12 10:05:15,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:05:15] 2025-10-12 10:05:15,377 | INFO     | traces error code: 0
[2025-10-12 06:05:15] 2025-10-12 10:05:15,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:05:15] 2025-10-12 10:05:15,490 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:05:15] 2025-10-12 10:05:15,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:05:15] 2025-10-12 10:05:15,495 [wrapper] pilotpid: 29944
[2025-10-12 06:05:15] 2025-10-12 10:05:15,497 [wrapper] Pilot exit status: 0
[2025-10-12 06:05:15] 2025-10-12 10:05:15,505 [wrapper] pandaids: 6838852063
[2025-10-12 06:05:15] 2025-10-12 10:05:15,539 [wrapper] cleanup supervisor_pilot 14063 29945
[2025-10-12 06:05:15] 2025-10-12 10:05:15,542 [wrapper] Test setup, not cleaning
[2025-10-12 06:05:15] 2025-10-12 10:05:15,544 [wrapper] apfmon messages muted
[2025-10-12 06:05:15] 2025-10-12 10:05:15,547 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:05:15] 2025-10-12 10:05:15,549 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:05:15]  *** Error codes and diagnostics ***
[2025-10-12 06:05:15]     "exeErrorCode": 0,
[2025-10-12 06:05:15]     "exeErrorDiag": "",
[2025-10-12 06:05:15]     "pilotErrorCode": 0,
[2025-10-12 06:05:15]     "pilotErrorDiag": "",
[2025-10-12 06:05:15]  *** Listing of results directory ***
[2025-10-12 06:05:15] total 416172
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 15:59 pilot3.tar.gz
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 16:03 queuedata.json
[2025-10-12 06:05:15] -rwx------ 1 boincer umatlas     36292 Oct 11 16:05 runpilot2-wrapper.sh
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas       100 Oct 12 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:05:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 02:51 run_atlas
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas       105 Oct 12 02:51 job.xml
[2025-10-12 06:05:15] -rw-r--r-- 2 boincer umatlas 220791888 Oct 12 02:51 EVNT.46676267._002579.pool.root.1
[2025-10-12 06:05:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:51 start_atlas.sh
[2025-10-12 06:05:15] drwxrwx--x 2 boincer umatlas      4096 Oct 12 02:51 shared
[2025-10-12 06:05:15] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 02:51 input.tar.gz
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas         0 Oct 12 02:51 boinc_lockfile
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas      2546 Oct 12 02:51 pandaJob.out
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas    975528 Oct 12 02:51 agis_schedconf.cvmfs.json
[2025-10-12 06:05:15] drwx------ 5 boincer umatlas      4096 Oct 12 02:51 pilot3
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 06:01 init_data.xml
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas 197408513 Oct 12 06:03 HITS.46676269._064158.pool.root.1
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas       531 Oct 12 06:04 boinc_task_state.xml
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas      1052 Oct 12 06:04 memory_monitor_summary.json
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas   1560580 Oct 12 06:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas    411293 Oct 12 06:04 log.46676269._064158.job.log.tgz.1
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas      7852 Oct 12 06:04 heartbeat.json
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas        95 Oct 12 06:04 pilot_heartbeat.json
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 06:05 boinc_mmap_file
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas        28 Oct 12 06:05 wrapper_checkpoint.txt
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas      5007 Oct 12 06:05 pilotlog.txt
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas   1616827 Oct 12 06:05 log.46676269._064158.job.log.1
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas       357 Oct 12 06:05 output.list
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas       620 Oct 12 06:05 runtime_log
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas   2048000 Oct 12 06:05 result.tar.gz
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 06:05 runtime_log.err
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas       661 Oct 12 06:05 K80KDmD1uR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIVhNDmBAxF8n.diag
[2025-10-12 06:05:15] -rw-r--r-- 1 boincer umatlas     20912 Oct 12 06:05 stderr.txt
[2025-10-12 06:05:15] HITS file was successfully produced:
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas 197408513 Oct 12 06:03 shared/HITS.pool.root.1
[2025-10-12 06:05:15]  *** Contents of shared directory: ***
[2025-10-12 06:05:15] total 410984
[2025-10-12 06:05:15] -rw-r--r-- 2 boincer umatlas 220791888 Oct 12 02:51 ATLAS.root_0
[2025-10-12 06:05:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 02:51 start_atlas.sh
[2025-10-12 06:05:15] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 02:51 input.tar.gz
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas 197408513 Oct 12 06:03 HITS.pool.root.1
[2025-10-12 06:05:15] -rw------- 1 boincer umatlas   2048000 Oct 12 06:05 result.tar.gz
06:05:16 (26268): run_atlas exited; CPU time 86760.220795
06:05:16 (26268): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN