Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:53 (3419131): wrapper (7.7.26015): starting
17:16:53 (3419131): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 17:16:53] Arguments: --nthreads 6
[2025-10-12 17:16:53] Threads: 6
[2025-10-12 17:16:53] Checking for CVMFS
[2025-10-12 17:16:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:16:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:16:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:16:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:16:54] 2.11.5.0 3651556 4047 71936 151613 3 9 38661861 52428800 1858 130560 0 12511692 99.998 136591 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 17:16:54] CVMFS is ok
[2025-10-12 17:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:16:54] Checking for apptainer binary...
[2025-10-12 17:16:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:16:54] Running /usr/bin/apptainer --version
[2025-10-12 17:16:54] apptainer version 1.3.5-1.el9
[2025-10-12 17:16:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:16:54] testio008
[2025-10-12 17:16:54] apptainer works
[2025-10-12 17:16:54] Set ATHENA_PROC_NUMBER=6
[2025-10-12 17:16:54] Set ATHENA_CORE_NUMBER=6
[2025-10-12 17:16:54] Starting ATLAS job with PandaID=6839221064
[2025-10-12 17:16:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:25:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:25:15] 2025-10-12 09:23:47,826 | INFO     | monitor loop #307: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:23:47,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:23:48,641 | INFO     | time since job start (4005s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:23:50,328 | INFO     | monitor loop #308: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:23:50,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:23:50,646 | INFO     | time since job start (4007s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:23:52,652 | INFO     | time since job start (4009s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:23:52,831 | INFO     | monitor loop #309: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:23:52,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:23:53,703 | INFO     | PID=3422898 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:25:15] 2025-10-12 09:23:53,703 | INFO     | .. there are 3 such processes running
[2025-10-12 18:25:15] 2025-10-12 09:23:54,704 | INFO     | time since job start (4011s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:23:54,704 | INFO     | 4016s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 18:25:15] 2025-10-12 09:23:55,333 | INFO     | monitor loop #310: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:23:55,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:23:56,709 | INFO     | time since job start (4013s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:23:57,835 | INFO     | monitor loop #311: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:23:57,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:23:58,714 | INFO     | time since job start (4015s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:00,337 | INFO     | monitor loop #312: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:24:00,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:24:00,719 | INFO     | time since job start (4017s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:02,724 | INFO     | time since job start (4019s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:02,840 | INFO     | monitor loop #313: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:24:02,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:24:04,729 | INFO     | time since job start (4021s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:05,343 | INFO     | monitor loop #314: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:24:05,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:24:06,734 | INFO     | time since job start (4023s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:07,846 | INFO     | monitor loop #315: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:24:07,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:24:08,739 | INFO     | time since job start (4025s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:10,349 | INFO     | monitor loop #316: job 0:6839221064 is in state 'finished'
[2025-10-12 18:25:15] 2025-10-12 09:24:10,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:15] 2025-10-12 09:24:10,744 | INFO     | time since job start (4027s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,301 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:25:15] 2025-10-12 09:24:12,302 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4051.2966499999993
[2025-10-12 18:25:15] 2025-10-12 09:24:12,304 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6839221064/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,304 | INFO     | extracted standard info from prmon json
[2025-10-12 18:25:15] 2025-10-12 09:24:12,305 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:25:15] 2025-10-12 09:24:12,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:25:15] 2025-10-12 09:24:12,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:25:15] 2025-10-12 09:24:12,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | sum of square deviations: 63666310.0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | sum of deviations: -4405762088.0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | mean x: 1760259116.0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | mean y: 2602101.0169491526
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | -- intersect: 121814010337.63684
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | intersect: 121814010337.63684
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | chi2: 0.026139054764439635
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | -- intersect: 121814010337.63684
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | current memory leak: -69.20 B/s (using 59 data points, chi2=0.03)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | could have reported an average CPU frequency of 3386 MHz (6 samples)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | ..............................
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | . Timing measurements:
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | . get job = 0 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | . initial setup = 5 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | . payload setup = 2 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,306 | INFO     | . stage-in = 0 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,307 | INFO     | . payload execution = 3968 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,307 | INFO     | . stage-out = 0 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,307 | INFO     | . log creation = 0 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,307 | INFO     | ..............................
[2025-10-12 18:25:15] 2025-10-12 09:24:12,749 | INFO     | time since job start (4029s) is within the limit (172800.0s)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | 
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | job summary report
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | --------------------------------------------------
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | PanDA job id: 6839221064
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | task id: 46676269
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | errors: (none)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | pilot state: finished 
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | transexitcode: 0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | exeerrorcode: 0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | exeerrordiag: 
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | exitcode: 0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | exitmsg: OK
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | cpuconsumptiontime: 21404 s
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | nevents: 400
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | neventsw: 0
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | pid: 3429620
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | pgrp: 3429620
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | corecount: 6
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | event service: False
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 3974: 2375080, 3975: 2384133, 3977: 2384133, 4016: 2384455}
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | --------------------------------------------------
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | 
[2025-10-12 18:25:15] 2025-10-12 09:24:12,809 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | job 6839221064 has completed (purged errors)
[2025-10-12 18:25:15] 2025-10-12 09:24:12,817 | INFO     | overall cleanup function is called
[2025-10-12 18:25:15] 2025-10-12 09:24:13,822 | INFO     | --- collectZombieJob: --- 10, [3429620]
[2025-10-12 18:25:15] 2025-10-12 09:24:13,823 | INFO     | zombie collector waiting for pid 3429620
[2025-10-12 18:25:15] 2025-10-12 09:24:13,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:25:15] 2025-10-12 09:24:13,823 | INFO     | collected zombie processes
[2025-10-12 18:25:15] 2025-10-12 09:24:13,823 | INFO     | will attempt to kill all subprocesses of pid=3429620
[2025-10-12 18:25:15] 2025-10-12 09:24:13,857 | INFO     | process IDs to be killed: [3429620] (in reverse order)
[2025-10-12 18:25:15] 2025-10-12 09:24:13,876 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:25:15] 2025-10-12 09:24:13,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:25:15] 2025-10-12 09:24:13,877 | INFO     | did not find any defunct processes belonging to 3429620
[2025-10-12 18:25:15] 2025-10-12 09:24:13,878 | INFO     | did not find any defunct processes belonging to 3429620
[2025-10-12 18:25:15] 2025-10-12 09:24:13,878 | INFO     | ready for new job
[2025-10-12 18:25:15] 2025-10-12 09:24:13,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:25:15] 2025-10-12 09:24:13,879 | INFO     | ***************************************
[2025-10-12 18:25:15] 2025-10-12 09:24:13,879 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:25:15] 2025-10-12 09:24:13,879 | INFO     | ***************************************
[2025-10-12 18:25:15] 2025-10-12 09:24:13,879 | INFO     | 
[2025-10-12 18:25:15] 2025-10-12 09:24:13,879 | INFO     | architecture information:
[2025-10-12 18:25:15] 2025-10-12 09:24:13,879 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:25:15] 2025-10-12 09:24:13,888 | INFO     | cat /etc/os-release:
[2025-10-12 18:25:15] NAME="CentOS Linux"
[2025-10-12 18:25:15] VERSION="7 (Core)"
[2025-10-12 18:25:15] ID="centos"
[2025-10-12 18:25:15] ID_LIKE="rhel fedora"
[2025-10-12 18:25:15] VERSION_ID="7"
[2025-10-12 18:25:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:25:15] ANSI_COLOR="0;31"
[2025-10-12 18:25:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:25:15] HOME_URL="https://www.centos.org/"
[2025-10-12 18:25:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:25:15] 
[2025-10-12 18:25:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:25:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:25:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:25:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:25:15] 
[2025-10-12 18:25:15] 2025-10-12 09:24:13,888 | INFO     | ***************************************
[2025-10-12 18:25:15] 2025-10-12 09:24:14,390 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | INFO     | sufficient remaining disk space (280484642816 B)
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | INFO     | update_server=False
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:25:15] 2025-10-12 09:24:14,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:25:15] 2025-10-12 09:24:14,398 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:25:15] 2025-10-12 09:24:14,398 | INFO     | aborting loop
[2025-10-12 18:25:15] 2025-10-12 09:24:14,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:25:15] 2025-10-12 09:24:14,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:25:15] 2025-10-12 09:24:14,867 | INFO     | all data control threads have been joined
[2025-10-12 18:25:15] 2025-10-12 09:24:14,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:25:15] 2025-10-12 09:24:15,401 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:15,402 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:15,771 | INFO     | all payload control threads have been joined
[2025-10-12 18:25:15] 2025-10-12 09:24:15,842 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:15,864 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:15,872 | INFO     | [data] control thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,065 | INFO     | all job control threads have been joined
[2025-10-12 18:25:15] 2025-10-12 09:24:16,372 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,403 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,612 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,698 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,776 | INFO     | [payload] control thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,794 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:16,795 | INFO     | [job] validate thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:17,070 | INFO     | [job] control thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:17,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:25:15] 2025-10-12 09:24:18,364 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:18,949 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:24:24,627 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:25:15] 2025-10-12 09:24:25,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:25:15] 2025-10-12 09:25:09,483 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:25:15] 2025-10-12 09:25:10,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213156558656)>', '<ExcThread(monitor, started 140212655073024)>']
[2025-10-12 18:25:15] 2025-10-12 09:25:10,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:25:15] 2025-10-12 09:25:10,676 | INFO     | [monitor] control thread has ended
[2025-10-12 18:25:15] 2025-10-12 09:25:15,672 | INFO     | all workflow threads have been joined
[2025-10-12 18:25:15] 2025-10-12 09:25:15,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:25:15] 2025-10-12 09:25:15,673 | INFO     | traces error code: 0
[2025-10-12 18:25:15] 2025-10-12 09:25:15,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:25:15] 2025-10-12 09:25:15,729 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:25:15] 2025-10-12 09:25:15,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:25:15] 2025-10-12 09:25:15,731 [wrapper] pilotpid: 3422898
[2025-10-12 18:25:15] 2025-10-12 09:25:15,732 [wrapper] Pilot exit status: 0
[2025-10-12 18:25:15] 2025-10-12 09:25:15,735 [wrapper] pandaids: 6839221064
[2025-10-12 18:25:15] 2025-10-12 09:25:15,747 [wrapper] cleanup supervisor_pilot 3487507 3422899
[2025-10-12 18:25:15] 2025-10-12 09:25:15,748 [wrapper] Test setup, not cleaning
[2025-10-12 18:25:15] 2025-10-12 09:25:15,749 [wrapper] apfmon messages muted
[2025-10-12 18:25:15] 2025-10-12 09:25:15,750 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:25:15] 2025-10-12 09:25:15,751 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:25:15]  *** Error codes and diagnostics ***
[2025-10-12 18:25:15]     "exeErrorCode": 0,
[2025-10-12 18:25:15]     "exeErrorDiag": "",
[2025-10-12 18:25:15]     "pilotErrorCode": 0,
[2025-10-12 18:25:15]     "pilotErrorDiag": "",
[2025-10-12 18:25:15]  *** Listing of results directory ***
[2025-10-12 18:25:15] total 415728
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc    557409 Oct 12 10:26 pilot3.tar.gz
[2025-10-12 18:25:15] -rwx------. 1 boinc boinc     36292 Oct 12 10:28 runpilot2-wrapper.sh
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc      5112 Oct 12 10:28 queuedata.json
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc       100 Oct 12 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:25:15] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 17:16 run_atlas
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc       105 Oct 12 17:16 job.xml
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc      9509 Oct 12 17:16 init_data.xml
[2025-10-12 18:25:15] -rw-r--r--. 2 boinc boinc 222658367 Oct 12 17:16 EVNT.46676267._003142.pool.root.1
[2025-10-12 18:25:15] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:16 start_atlas.sh
[2025-10-12 18:25:15] drwxrwx--x. 2 boinc boinc        68 Oct 12 17:16 shared
[2025-10-12 18:25:15] -rw-r--r--. 2 boinc boinc    569677 Oct 12 17:16 input.tar.gz
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc         0 Oct 12 17:16 boinc_lockfile
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc      2550 Oct 12 17:16 pandaJob.out
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc    975520 Oct 12 17:16 agis_schedconf.cvmfs.json
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc   1560580 Oct 12 17:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:25:15] drwx------. 5 boinc boinc      4096 Oct 12 17:17 pilot3
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc 197368305 Oct 12 18:23 HITS.46676269._068388.pool.root.1
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc       529 Oct 12 18:23 boinc_task_state.xml
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc      1023 Oct 12 18:23 memory_monitor_summary.json
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc        95 Oct 12 18:23 pilot_heartbeat.json
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc    284207 Oct 12 18:23 log.46676269._068388.job.log.tgz.1
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc      7771 Oct 12 18:24 heartbeat.json
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:24 boinc_mmap_file
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc        27 Oct 12 18:24 wrapper_checkpoint.txt
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc      4625 Oct 12 18:25 pilotlog.txt
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc    609930 Oct 12 18:25 log.46676269._068388.job.log.1
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc       357 Oct 12 18:25 output.list
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:25 runtime_log
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc    911360 Oct 12 18:25 result.tar.gz
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc      8661 Oct 12 18:25 runtime_log.err
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc       643 Oct 12 18:25 KJHLDm23zR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLvSMDmaFtGln.diag
[2025-10-12 18:25:15] -rw-r--r--. 1 boinc boinc     21902 Oct 12 18:25 stderr.txt
[2025-10-12 18:25:15] HITS file was successfully produced:
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc 197368305 Oct 12 18:23 shared/HITS.pool.root.1
[2025-10-12 18:25:15]  *** Contents of shared directory: ***
[2025-10-12 18:25:15] total 411652
[2025-10-12 18:25:15] -rw-r--r--. 2 boinc boinc 222658367 Oct 12 17:16 ATLAS.root_0
[2025-10-12 18:25:15] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:16 start_atlas.sh
[2025-10-12 18:25:15] -rw-r--r--. 2 boinc boinc    569677 Oct 12 17:16 input.tar.gz
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc 197368305 Oct 12 18:23 HITS.pool.root.1
[2025-10-12 18:25:15] -rw-------. 1 boinc boinc    911360 Oct 12 18:25 result.tar.gz
18:25:17 (3419131): run_atlas exited; CPU time 21427.108742
18:25:17 (3419131): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN